./ install/ install/slack-desc usr/ usr/bin/ usr/bin/caps usr/doc/ usr/doc/CAPS_coevolution-2.0/ usr/doc/CAPS_coevolution-2.0/CAPS_coevolution.SlackBuild usr/doc/CAPS_coevolution-2.0/References usr/doc/CAPS_coevolution-2.0/caps_manual.pdf usr/share/ usr/share/CAPS_coevolution/ usr/share/CAPS_coevolution/sample/ usr/share/CAPS_coevolution/sample/TLR1.fa usr/share/CAPS_coevolution/sample/TLR2.fa usr/share/CAPS_coevolution/sample/TLR6.fa usr/share/CAPS_coevolution/structures/ usr/share/CAPS_coevolution/structures/TLR1.pdb usr/share/CAPS_coevolution/structures/TLR2.pdb usr/share/CAPS_coevolution/structures/TLR6.pdb usr/share/CAPS_coevolution/trees/ usr/share/CAPS_coevolution/trees/TLR1.tre usr/share/CAPS_coevolution/trees/TLR2.tre usr/share/CAPS_coevolution/trees/TLR6.tre inflating: caps-linux/sample/TLR1.fa inflating: caps-linux/sample/TLR2.fa inflating: caps-linux/sample/TLR6.fa creating: caps-linux/structures/ inflating: caps-linux/structures/.DS_Store creating: __MACOSX/caps-linux/structures/ inflating: __MACOSX/caps-linux/structures/._.DS_Store inflating: caps-linux/structures/TLR1.pdb inflating: caps-linux/structures/TLR2.pdb inflating: caps-linux/structures/TLR6.pdb creating: caps-linux/trees/ inflating: caps-linux/trees/TLR1.tre inflating: caps-linux/trees/TLR2.tre inflating: caps-linux/trees/TLR6.tre Slackware package maker, version 3.14159265. Searching for symbolic links: No symbolic links were found, so we won't make an installation script. You can make your own later in ./install/doinst.sh and rebuild the package if you like. This next step is optional - you can set the directories in your package to some sane permissions. If any of the directories in your package have special permissions, then DO NOT reset them here! Would you like to reset all directory permissions to 755 (drwxr-xr-x) and directory ownerships to root.root ([y]es, [n]o)? n Creating Slackware package: /usr/src/slapt-src/academic/CAPS_coevolution/CAPS_coevolution-2.0-i386-1salix15.0.txz Slackware package /usr/src/slapt-src/academic/CAPS_coevolution/CAPS_coevolution-2.0-i386-1salix15.0.txz created. Installing package CAPS_coevolution-2.0-i386-1salix15.0... | CAPS_coevolution (Coevolution Analysis using Protein Sequences) | | CAPS is aimed at measuring the coevolution between amino acid | sites belonging to the same protein (intra-molecular coevolution) | or to two functionally or physically interacting proteins (inter- | molecular coevolution). In addition, a test which assesses | whether two proteins are interacting is implemented. | | Home: http://bioinf.gen.tcd.ie/~faresm/software/software.html | References: /usr/doc/CAPS_coevolution-2.0/References | | |