The following packages will be installed:
 RAxML 
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standard-RAxML-8.2.12/
standard-RAxML-8.2.12/.gitignore
standard-RAxML-8.2.12/Makefile.AVX.HYBRID.gcc
standard-RAxML-8.2.12/Makefile.AVX.MPI.gcc
standard-RAxML-8.2.12/Makefile.AVX.PTHREADS.gcc
standard-RAxML-8.2.12/Makefile.AVX.PTHREADS.mac
standard-RAxML-8.2.12/Makefile.AVX.gcc
standard-RAxML-8.2.12/Makefile.AVX.mac
standard-RAxML-8.2.12/Makefile.AVX2.HYBRID.gcc
standard-RAxML-8.2.12/Makefile.AVX2.MPI.gcc
standard-RAxML-8.2.12/Makefile.AVX2.PTHREADS.gcc
standard-RAxML-8.2.12/Makefile.AVX2.PTHREADS.mac
standard-RAxML-8.2.12/Makefile.AVX2.gcc
standard-RAxML-8.2.12/Makefile.AVX2.mac
standard-RAxML-8.2.12/Makefile.HYBRID.gcc
standard-RAxML-8.2.12/Makefile.MPI.gcc
standard-RAxML-8.2.12/Makefile.PTHREADS.gcc
standard-RAxML-8.2.12/Makefile.PTHREADS.mac
standard-RAxML-8.2.12/Makefile.QuartetMPI.gcc
standard-RAxML-8.2.12/Makefile.SSE3.HYBRID.gcc
standard-RAxML-8.2.12/Makefile.SSE3.MPI.gcc
standard-RAxML-8.2.12/Makefile.SSE3.PTHREADS.gcc
standard-RAxML-8.2.12/Makefile.SSE3.PTHREADS.mac
standard-RAxML-8.2.12/Makefile.SSE3.QuartetMPI.gcc
standard-RAxML-8.2.12/Makefile.SSE3.gcc
standard-RAxML-8.2.12/Makefile.SSE3.mac
standard-RAxML-8.2.12/Makefile.gcc
standard-RAxML-8.2.12/README
standard-RAxML-8.2.12/WindowsExecutables_v8.2.10/
standard-RAxML-8.2.12/WindowsExecutables_v8.2.10/README
standard-RAxML-8.2.12/WindowsExecutables_v8.2.10/raxmlHPC-AVX.exe
standard-RAxML-8.2.12/WindowsExecutables_v8.2.10/raxmlHPC-AVX2.exe
standard-RAxML-8.2.12/WindowsExecutables_v8.2.10/raxmlHPC-PTHREADS-AVX.exe
standard-RAxML-8.2.12/WindowsExecutables_v8.2.10/raxmlHPC-PTHREADS-AVX2.exe
standard-RAxML-8.2.12/WindowsExecutables_v8.2.10/raxmlHPC-PTHREADS-SSE3.exe
standard-RAxML-8.2.12/WindowsExecutables_v8.2.10/raxmlHPC-PTHREADS.exe
standard-RAxML-8.2.12/WindowsExecutables_v8.2.10/raxmlHPC-SSE3.exe
standard-RAxML-8.2.12/WindowsExecutables_v8.2.10/raxmlHPC.exe
standard-RAxML-8.2.12/WindowsExecutables_v8.2.4/
standard-RAxML-8.2.12/WindowsExecutables_v8.2.4/README
standard-RAxML-8.2.12/WindowsExecutables_v8.2.4/pthreadGC2.dll
standard-RAxML-8.2.12/WindowsExecutables_v8.2.4/raxmlHPC-AVX.exe
standard-RAxML-8.2.12/WindowsExecutables_v8.2.4/raxmlHPC-PTHREADS-AVX.exe
standard-RAxML-8.2.12/WindowsExecutables_v8.2.4/raxmlHPC-PTHREADS-SSE3.exe
standard-RAxML-8.2.12/WindowsExecutables_v8.2.4/raxmlHPC-PTHREADS.exe
standard-RAxML-8.2.12/WindowsExecutables_v8.2.4/raxmlHPC-SSE3.exe
standard-RAxML-8.2.12/WindowsExecutables_v8.2.4/raxmlHPC.exe
standard-RAxML-8.2.12/ancestralStates.c
standard-RAxML-8.2.12/avxLikelihood.c
standard-RAxML-8.2.12/axml.c
standard-RAxML-8.2.12/axml.h
standard-RAxML-8.2.12/bipartitionList.c
standard-RAxML-8.2.12/classify.c
standard-RAxML-8.2.12/eigen.c
standard-RAxML-8.2.12/evaluateGenericSpecial.c
standard-RAxML-8.2.12/evaluatePartialGenericSpecial.c
standard-RAxML-8.2.12/fastDNAparsimony.c
standard-RAxML-8.2.12/fastSearch.c
standard-RAxML-8.2.12/globalVariables.h
standard-RAxML-8.2.12/gpl-3.0.txt
standard-RAxML-8.2.12/leaveDropping.c
standard-RAxML-8.2.12/legacyCode.c
standard-RAxML-8.2.12/makenewzGenericSpecial.c
standard-RAxML-8.2.12/manual/
standard-RAxML-8.2.12/manual/NewManual.odt
standard-RAxML-8.2.12/manual/NewManual.pdf
standard-RAxML-8.2.12/mem_alloc.c
standard-RAxML-8.2.12/models.c
standard-RAxML-8.2.12/multiple.c
standard-RAxML-8.2.12/newviewGenericSpecial.c
standard-RAxML-8.2.12/optimizeModel.c
standard-RAxML-8.2.12/parsePartitions.c
standard-RAxML-8.2.12/rapidBootstrap.c
standard-RAxML-8.2.12/rmq.h
standard-RAxML-8.2.12/rmqs.c
standard-RAxML-8.2.12/rmqs.h
standard-RAxML-8.2.12/rogueEPA.c
standard-RAxML-8.2.12/searchAlgo.c
standard-RAxML-8.2.12/topologies.c
standard-RAxML-8.2.12/treeIO.c
standard-RAxML-8.2.12/usefulScripts/
standard-RAxML-8.2.12/usefulScripts/ProteinModelSelection.pl
standard-RAxML-8.2.12/usefulScripts/applyRAxML2AllFilesInDirectory.pl
standard-RAxML-8.2.12/usefulScripts/bsBranchLengths.pl
standard-RAxML-8.2.12/usefulScripts/convertFasta2Phylip.sh
rm -f *.o raxml
gcc  -O2 -march=i586 -mtune=i686 -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2 -msse    -c -o axml.o axml.c
gcc  -O2 -march=i586 -mtune=i686 -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2 -msse    -c -o optimizeModel.o optimizeModel.c
gcc  -O2 -march=i586 -mtune=i686 -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2 -msse    -c -o multiple.o multiple.c
gcc  -O2 -march=i586 -mtune=i686 -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2 -msse    -c -o searchAlgo.o searchAlgo.c
gcc  -O2 -march=i586 -mtune=i686 -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2 -msse    -c -o topologies.o topologies.c
gcc  -O2 -march=i586 -mtune=i686 -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2 -msse    -c -o parsePartitions.o parsePartitions.c
gcc  -O2 -march=i586 -mtune=i686 -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2 -msse    -c -o treeIO.o treeIO.c
gcc  -O2 -march=i586 -mtune=i686 -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2 -msse    -c -o models.o models.c
gcc  -O2 -march=i586 -mtune=i686 -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2 -msse    -c -o bipartitionList.o bipartitionList.c
gcc  -O2 -march=i586 -mtune=i686 -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2 -msse    -c -o rapidBootstrap.o rapidBootstrap.c
gcc  -O2 -march=i586 -mtune=i686 -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2 -msse    -c -o evaluatePartialGenericSpecial.o evaluatePartialGenericSpecial.c
gcc  -O2 -march=i586 -mtune=i686 -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2 -msse    -c -o evaluateGenericSpecial.o evaluateGenericSpecial.c
gcc  -O2 -march=i586 -mtune=i686 -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2 -msse    -c -o newviewGenericSpecial.o newviewGenericSpecial.c
gcc  -O2 -march=i586 -mtune=i686 -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2 -msse    -c -o makenewzGenericSpecial.o makenewzGenericSpecial.c
gcc  -O2 -march=i586 -mtune=i686 -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2 -msse    -c -o classify.o classify.c
gcc  -O2 -march=i586 -mtune=i686 -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2 -msse    -c -o fastDNAparsimony.o fastDNAparsimony.c
gcc  -O2 -march=i586 -mtune=i686 -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2 -msse    -c -o fastSearch.o fastSearch.c
gcc  -O2 -march=i586 -mtune=i686 -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2 -msse    -c -o leaveDropping.o leaveDropping.c
gcc  -O2 -march=i586 -mtune=i686 -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2 -msse    -c -o rmqs.o rmqs.c
gcc  -O2 -march=i586 -mtune=i686 -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2 -msse    -c -o rogueEPA.o rogueEPA.c
gcc  -O2 -march=i586 -mtune=i686 -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2 -msse    -c -o ancestralStates.o ancestralStates.c
gcc  -O2 -march=i586 -mtune=i686 -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2 -msse    -c -o mem_alloc.o mem_alloc.c
gcc  -c -o eigen.o eigen.c 
gcc  -o raxml axml.o  optimizeModel.o multiple.o searchAlgo.o topologies.o parsePartitions.o treeIO.o models.o bipartitionList.o rapidBootstrap.o evaluatePartialGenericSpecial.o evaluateGenericSpecial.o newviewGenericSpecial.o makenewzGenericSpecial.o   classify.o fastDNAparsimony.o fastSearch.o leaveDropping.o rmqs.o rogueEPA.o ancestralStates.o  mem_alloc.o  eigen.o -lm  
rm -f *.o raxml-MPI
mpicc  -O2 -march=i586 -mtune=i686 -D_WAYNE_MPI -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2  -msse   -c -o axml.o axml.c
mpicc  -O2 -march=i586 -mtune=i686 -D_WAYNE_MPI -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2  -msse   -c -o optimizeModel.o optimizeModel.c
mpicc  -O2 -march=i586 -mtune=i686 -D_WAYNE_MPI -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2  -msse   -c -o multiple.o multiple.c
mpicc  -O2 -march=i586 -mtune=i686 -D_WAYNE_MPI -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2  -msse   -c -o searchAlgo.o searchAlgo.c
mpicc  -O2 -march=i586 -mtune=i686 -D_WAYNE_MPI -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2  -msse   -c -o topologies.o topologies.c
mpicc  -O2 -march=i586 -mtune=i686 -D_WAYNE_MPI -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2  -msse   -c -o parsePartitions.o parsePartitions.c
mpicc  -O2 -march=i586 -mtune=i686 -D_WAYNE_MPI -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2  -msse   -c -o treeIO.o treeIO.c
mpicc  -O2 -march=i586 -mtune=i686 -D_WAYNE_MPI -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2  -msse   -c -o models.o models.c
mpicc  -O2 -march=i586 -mtune=i686 -D_WAYNE_MPI -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2  -msse   -c -o bipartitionList.o bipartitionList.c
mpicc  -O2 -march=i586 -mtune=i686 -D_WAYNE_MPI -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2  -msse   -c -o rapidBootstrap.o rapidBootstrap.c
mpicc  -O2 -march=i586 -mtune=i686 -D_WAYNE_MPI -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2  -msse   -c -o evaluatePartialGenericSpecial.o evaluatePartialGenericSpecial.c
mpicc  -O2 -march=i586 -mtune=i686 -D_WAYNE_MPI -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2  -msse   -c -o evaluateGenericSpecial.o evaluateGenericSpecial.c
mpicc  -O2 -march=i586 -mtune=i686 -D_WAYNE_MPI -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2  -msse   -c -o newviewGenericSpecial.o newviewGenericSpecial.c
mpicc  -O2 -march=i586 -mtune=i686 -D_WAYNE_MPI -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2  -msse   -c -o makenewzGenericSpecial.o makenewzGenericSpecial.c
mpicc  -O2 -march=i586 -mtune=i686 -D_WAYNE_MPI -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2  -msse   -c -o classify.o classify.c
mpicc  -O2 -march=i586 -mtune=i686 -D_WAYNE_MPI -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2  -msse   -c -o fastDNAparsimony.o fastDNAparsimony.c
mpicc  -O2 -march=i586 -mtune=i686 -D_WAYNE_MPI -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2  -msse   -c -o fastSearch.o fastSearch.c
mpicc  -O2 -march=i586 -mtune=i686 -D_WAYNE_MPI -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2  -msse   -c -o leaveDropping.o leaveDropping.c
mpicc  -O2 -march=i586 -mtune=i686 -D_WAYNE_MPI -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2  -msse   -c -o rmqs.o rmqs.c
mpicc  -O2 -march=i586 -mtune=i686 -D_WAYNE_MPI -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2  -msse   -c -o rogueEPA.o rogueEPA.c
mpicc  -O2 -march=i586 -mtune=i686 -D_WAYNE_MPI -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2  -msse   -c -o ancestralStates.o ancestralStates.c
mpicc  -O2 -march=i586 -mtune=i686 -D_WAYNE_MPI -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2  -msse   -c -o mem_alloc.o mem_alloc.c
mpicc  -c -o eigen.o eigen.c 
mpicc  -o raxml-MPI axml.o  optimizeModel.o multiple.o searchAlgo.o topologies.o parsePartitions.o treeIO.o models.o bipartitionList.o rapidBootstrap.o evaluatePartialGenericSpecial.o evaluateGenericSpecial.o newviewGenericSpecial.o makenewzGenericSpecial.o   classify.o fastDNAparsimony.o fastSearch.o leaveDropping.o rmqs.o rogueEPA.o ancestralStates.o  mem_alloc.o eigen.o  -lm  

Slackware package maker, version 3.14159265.

Searching for symbolic links:

No symbolic links were found, so we won't make an installation script.
You can make your own later in ./install/doinst.sh and rebuild the
package if you like.

This next step is optional - you can set the directories in your package
to some sane permissions. If any of the directories in your package have
special permissions, then DO NOT reset them here!

Would you like to reset all directory permissions to 755 (drwxr-xr-x) and
directory ownerships to root.root ([y]es, [n]o)? n

Creating Slackware package:  /usr/src/slapt-src/academic/RAxML/RAxML-8.2.12-i586-1salix15.0.txz

./
install/
install/slack-desc
usr/
usr/bin/
usr/bin/raxml
usr/bin/raxml-MPI
usr/doc/
usr/doc/RAxML-8.2.12/
usr/doc/RAxML-8.2.12/RAxML.SlackBuild
usr/doc/RAxML-8.2.12/README
usr/doc/RAxML-8.2.12/References
usr/doc/RAxML-8.2.12/manual/
usr/doc/RAxML-8.2.12/manual/NewManual.odt
usr/doc/RAxML-8.2.12/manual/NewManual.pdf
usr/share/
usr/share/RAxML/
usr/share/RAxML/usefulScripts/
usr/share/RAxML/usefulScripts/ProteinModelSelection.pl
usr/share/RAxML/usefulScripts/applyRAxML2AllFilesInDirectory.pl
usr/share/RAxML/usefulScripts/bsBranchLengths.pl
usr/share/RAxML/usefulScripts/convertFasta2Phylip.sh

Slackware package /usr/src/slapt-src/academic/RAxML/RAxML-8.2.12-i586-1salix15.0.txz created.

Installing package RAxML-8.2.12-i586-1salix15.0...
| RAxML (Randomized Axelerated Maximum Likelihood)
| 
| RAxML is a program for sequential and parallel Maximum Likelihood
| (ML) based inference of large phylogenetic trees. It can also be
| used for postanalyses of sets of phylogenetic trees, analyses of
| alignments and, evolutionary placement of short reads.
| 
| https://cme.h-its.org/exelixis/web/software/raxml/index.html
| https://github.com/stamatak/standard-RAxML
| 
| 
| 
|