The following packages will be installed: ViennaRNA Fetching README... 0%100%100%100%100%100%Done Fetching ViennaRNA.SlackBuild... 0%100%100%100%100%100%Done Fetching ViennaRNA.info... 0%100%100%100%100%100%Done Fetching slack-desc... 0%100%100%100%100%100%Done ViennaRNA-2.5.0/ ViennaRNA-2.5.0/Makefile.am ViennaRNA-2.5.0/AUTHORS ViennaRNA-2.5.0/examples/ ViennaRNA-2.5.0/examples/Makefile.am ViennaRNA-2.5.0/examples/Python/ ViennaRNA-2.5.0/examples/Python/oo_example1.py ViennaRNA-2.5.0/examples/Python/RNAfold_MEA.py ViennaRNA-2.5.0/examples/Python/helloworld_nondefault.py ViennaRNA-2.5.0/examples/Python/helloworld_mfe.py ViennaRNA-2.5.0/examples/Python/subopt.py ViennaRNA-2.5.0/examples/Python/maximum_matching.py ViennaRNA-2.5.0/examples/Python/helloworld_mfe_comparative.py ViennaRNA-2.5.0/examples/Python/boltzmann_sampling.py ViennaRNA-2.5.0/examples/callback_subopt.c ViennaRNA-2.5.0/examples/fold_compound_mfe.c ViennaRNA-2.5.0/examples/Makefile.in ViennaRNA-2.5.0/examples/helloworld_mfe_comparative.c ViennaRNA-2.5.0/examples/Perl5/ ViennaRNA-2.5.0/examples/Perl5/helloworld_mfe.pl ViennaRNA-2.5.0/examples/Perl5/oo_example1.pl ViennaRNA-2.5.0/examples/Perl5/helloworld_nondefault.pl ViennaRNA-2.5.0/examples/Perl5/helloworld_mfe_comparative.pl ViennaRNA-2.5.0/examples/Perl5/maximum_matching.pl ViennaRNA-2.5.0/examples/files/ ViennaRNA-2.5.0/examples/files/alignment_maf.maf ViennaRNA-2.5.0/examples/files/alignment_clustal.aln ViennaRNA-2.5.0/examples/files/alignment_stockholm.stk ViennaRNA-2.5.0/examples/files/alignment_fasta.fa ViennaRNA-2.5.0/examples/helloworld_mfe.c ViennaRNA-2.5.0/examples/example1.c ViennaRNA-2.5.0/examples/soft_constraints_up.c ViennaRNA-2.5.0/examples/fold_compound_md.c ViennaRNA-2.5.0/examples/helloworld_probabilities.c ViennaRNA-2.5.0/examples/example_old.c ViennaRNA-2.5.0/configure ViennaRNA-2.5.0/doc/ ViennaRNA-2.5.0/doc/Makefile.am ViennaRNA-2.5.0/doc/refman.include/ ViennaRNA-2.5.0/doc/refman.include/structure_probing.dox ViennaRNA-2.5.0/doc/refman.include/pf_algorithms.dox ViennaRNA-2.5.0/doc/refman.include/main.dox ViennaRNA-2.5.0/doc/refman.include/classified_dp.dox ViennaRNA-2.5.0/doc/refman.include/comparative_structure_prediction.dox ViennaRNA-2.5.0/doc/refman.include/examples_python.dox ViennaRNA-2.5.0/doc/refman.include/structure_motifs.dox ViennaRNA-2.5.0/doc/refman.include/callbacks.dox ViennaRNA-2.5.0/doc/refman.include/sequence_design.dox ViennaRNA-2.5.0/doc/refman.include/local_structures.dox ViennaRNA-2.5.0/doc/refman.include/landscape.dox ViennaRNA-2.5.0/doc/refman.include/helloworld.dox ViennaRNA-2.5.0/doc/refman.include/install.dox ViennaRNA-2.5.0/doc/refman.include/API_3_0.dox ViennaRNA-2.5.0/doc/refman.include/energy_evaluation.dox ViennaRNA-2.5.0/doc/refman.include/distance_measures.dox ViennaRNA-2.5.0/doc/refman.include/structures.dox ViennaRNA-2.5.0/doc/refman.include/grammar.dox ViennaRNA-2.5.0/doc/refman.include/structure_notations.dox ViennaRNA-2.5.0/doc/refman.include/examples_perl5.dox ViennaRNA-2.5.0/doc/refman.include/io_formats.dox ViennaRNA-2.5.0/doc/refman.include/ligand_binding.dox ViennaRNA-2.5.0/doc/refman.include/00-layout.dox ViennaRNA-2.5.0/doc/refman.include/mfe_algorithms.dox ViennaRNA-2.5.0/doc/refman.include/swig_interface.dox ViennaRNA-2.5.0/doc/refman.include/plotting.dox ViennaRNA-2.5.0/doc/refman.include/suboptimals.dox ViennaRNA-2.5.0/doc/refman.include/examples.dox ViennaRNA-2.5.0/doc/refman.include/data_structures.dox ViennaRNA-2.5.0/doc/refman.include/helloworld_swig.dox ViennaRNA-2.5.0/doc/refman.include/install.dox.in ViennaRNA-2.5.0/doc/refman.include/rip.dox ViennaRNA-2.5.0/doc/doxygen.conf.in ViennaRNA-2.5.0/doc/CLA/ ViennaRNA-2.5.0/doc/CLA/Makefile.am ViennaRNA-2.5.0/doc/CLA/CLA-Entity.tex ViennaRNA-2.5.0/doc/CLA/ViennaRNA-CLA-Individual.pdf ViennaRNA-2.5.0/doc/CLA/Makefile.in ViennaRNA-2.5.0/doc/CLA/ViennaRNA-CLA-Entity.pdf ViennaRNA-2.5.0/doc/CLA/CLA-Individual.tex ViennaRNA-2.5.0/doc/RNAlib-2.5.0.pdf ViennaRNA-2.5.0/doc/refman-html ViennaRNA-2.5.0/doc/Makefile.in ViennaRNA-2.5.0/doc/viennarna.bib ViennaRNA-2.5.0/doc/refman.images/ ViennaRNA-2.5.0/doc/refman.images/ligands_up_callback.eps ViennaRNA-2.5.0/doc/refman.images/recursions.png ViennaRNA-2.5.0/doc/refman.images/theo_aptamer.eps ViennaRNA-2.5.0/doc/refman.images/Crecursion.svg ViennaRNA-2.5.0/doc/refman.images/shift_move_intervals.svg ViennaRNA-2.5.0/doc/refman.images/decomp_ext_stem_ext.eps ViennaRNA-2.5.0/doc/refman.images/decomp_il.eps ViennaRNA-2.5.0/doc/refman.images/loop_types.png ViennaRNA-2.5.0/doc/refman.images/ligands_up_callback.svg ViennaRNA-2.5.0/doc/refman.images/decomp_ml_ml.svg ViennaRNA-2.5.0/doc/refman.images/decomp_ml.eps ViennaRNA-2.5.0/doc/refman.images/Grecursion.svg ViennaRNA-2.5.0/doc/refman.images/decomp_ext_stem_ext.svg ViennaRNA-2.5.0/doc/refman.images/decomp_ext_up.svg ViennaRNA-2.5.0/doc/refman.images/loop_types.svg ViennaRNA-2.5.0/doc/refman.images/decomp_ml_up.svg ViennaRNA-2.5.0/doc/refman.images/Grecursion.eps ViennaRNA-2.5.0/doc/refman.images/decomp_ml_ml.eps ViennaRNA-2.5.0/doc/refman.images/loop_decomposition.eps ViennaRNA-2.5.0/doc/refman.images/decomp_ml_coaxial.eps ViennaRNA-2.5.0/doc/refman.images/recursions.eps ViennaRNA-2.5.0/doc/refman.images/GCrecursion.eps ViennaRNA-2.5.0/doc/refman.images/Grecursion.png ViennaRNA-2.5.0/doc/refman.images/GCrecursion.png ViennaRNA-2.5.0/doc/refman.images/B_prod_rule.eps ViennaRNA-2.5.0/doc/refman.images/decomp_ml_ml_stem.svg ViennaRNA-2.5.0/doc/refman.images/Crecursion.png ViennaRNA-2.5.0/doc/refman.images/decomp_ml_ml_ml.eps ViennaRNA-2.5.0/doc/refman.images/decomp_ml_ml_stem.eps ViennaRNA-2.5.0/doc/refman.images/decomp_ext_ext_stem1.eps ViennaRNA-2.5.0/doc/refman.images/decomp_ml_ml_ml.svg ViennaRNA-2.5.0/doc/refman.images/shift_move_intervals.eps ViennaRNA-2.5.0/doc/refman.images/loop_types.eps ViennaRNA-2.5.0/doc/refman.images/decomp_hp.eps ViennaRNA-2.5.0/doc/refman.images/loop_decomposition.svg ViennaRNA-2.5.0/doc/refman.images/B_prod_rule.svg ViennaRNA-2.5.0/doc/refman.images/decomp_ext_ext_stem1.svg ViennaRNA-2.5.0/doc/refman.images/decomp_ml_stem.eps ViennaRNA-2.5.0/doc/refman.images/recursions.svg ViennaRNA-2.5.0/doc/refman.images/decomp_hp.svg ViennaRNA-2.5.0/doc/refman.images/decomp_ext_ext_stem.eps ViennaRNA-2.5.0/doc/refman.images/decomp_il.svg ViennaRNA-2.5.0/doc/refman.images/decomp_ext_stem.eps ViennaRNA-2.5.0/doc/refman.images/Crecursion.eps ViennaRNA-2.5.0/doc/refman.images/GCrecursion.svg ViennaRNA-2.5.0/doc/refman.images/decomp_ml_coaxial.svg ViennaRNA-2.5.0/doc/refman.images/decomp_ext_ext_stem.svg ViennaRNA-2.5.0/doc/refman.images/decomp_ext_ext.eps ViennaRNA-2.5.0/doc/refman.images/loop_decomposition.png ViennaRNA-2.5.0/doc/refman.images/theo_aptamer.svg ViennaRNA-2.5.0/doc/refman.images/decomp_ml.svg ViennaRNA-2.5.0/doc/refman.images/decomp_ml_up.eps ViennaRNA-2.5.0/doc/refman.images/decomp_ext_ext_ext.eps ViennaRNA-2.5.0/doc/refman.images/decomp_ext_ext_ext.svg ViennaRNA-2.5.0/doc/refman.images/decomp_ml_stem.svg ViennaRNA-2.5.0/doc/refman.images/decomp_ext_ext.svg ViennaRNA-2.5.0/doc/refman.images/decomp_ext_stem.svg ViennaRNA-2.5.0/doc/refman.images/decomp_ext_up.eps ViennaRNA-2.5.0/doc/latex/ ViennaRNA-2.5.0/doc/latex/strings_8h_source.tex ViennaRNA-2.5.0/doc/latex/pk__plex_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/soft_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/BoyerMoore_8h_source.tex ViennaRNA-2.5.0/doc/latex/fold__compound_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/structPostorder__list.tex ViennaRNA-2.5.0/doc/latex/mm_8h.tex ViennaRNA-2.5.0/doc/latex/group__dp__matrices.md5 ViennaRNA-2.5.0/doc/latex/equilibrium__probs_8h.tex ViennaRNA-2.5.0/doc/latex/mm_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/part__func__co_8h.tex ViennaRNA-2.5.0/doc/latex/all_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/utils_2units_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/group__struct__utils__plist.md5 ViennaRNA-2.5.0/doc/latex/profiledist_8h_source.tex ViennaRNA-2.5.0/doc/latex/part__func__window_8h.tex ViennaRNA-2.5.0/doc/latex/centroid_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/snofold_8h_source.tex ViennaRNA-2.5.0/doc/latex/constraints_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/group__mfe__window__deprecated.tex ViennaRNA-2.5.0/doc/latex/layouts_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/all_8h_source.tex ViennaRNA-2.5.0/doc/latex/decomp_ml_up.pdf ViennaRNA-2.5.0/doc/latex/params_2basic_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/constraints__SHAPE_8h_source.tex ViennaRNA-2.5.0/doc/latex/bug.tex ViennaRNA-2.5.0/doc/latex/mfe__window_8h.tex ViennaRNA-2.5.0/doc/latex/io_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/commands_8h_source.tex ViennaRNA-2.5.0/doc/latex/hairpin__loops_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/constraints_2basic_8h_source.tex ViennaRNA-2.5.0/doc/latex/PKplex_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__SHAPE__reactivities.md5 ViennaRNA-2.5.0/doc/latex/ligands_up_callback.eps ViennaRNA-2.5.0/doc/latex/group__struct__utils__pair__table.tex ViennaRNA-2.5.0/doc/latex/part__func__co_8h_source.tex ViennaRNA-2.5.0/doc/latex/utils_2alignments_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/part__func_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/group__mfe__backtracking.tex ViennaRNA-2.5.0/doc/latex/group__part__func__global.pdf ViennaRNA-2.5.0/doc/latex/group__heap__utils.pdf ViennaRNA-2.5.0/doc/latex/paths_8h.tex ViennaRNA-2.5.0/doc/latex/probabilities_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/group__eval__loops__ext.tex ViennaRNA-2.5.0/doc/latex/landscape_2walk_8h.tex ViennaRNA-2.5.0/doc/latex/plotting_2naview_8h_source.tex ViennaRNA-2.5.0/doc/latex/alphabet_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/fold__compound_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/constants_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/io_2file__formats__msa_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/convert__epars_8h.tex ViennaRNA-2.5.0/doc/latex/group__plotting__utils__deprecated.tex ViennaRNA-2.5.0/doc/latex/plot__layouts_8h.tex ViennaRNA-2.5.0/doc/latex/group__plotting__utils__deprecated.md5 ViennaRNA-2.5.0/doc/latex/hash__tables_8h.tex ViennaRNA-2.5.0/doc/latex/group__gquads.tex ViennaRNA-2.5.0/doc/latex/group__model__details.tex ViennaRNA-2.5.0/doc/latex/Makefile ViennaRNA-2.5.0/doc/latex/utils_2structures_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/group__domains__up.md5 ViennaRNA-2.5.0/doc/latex/structvrna__fc__s__coll__graph.pdf ViennaRNA-2.5.0/doc/latex/interior__loops_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__file__formats.pdf ViennaRNA-2.5.0/doc/latex/structured__domains_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/utils_2alignments_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/char__stream_8h.tex ViennaRNA-2.5.0/doc/latex/group__neighbors.pdf ViennaRNA-2.5.0/doc/latex/plotting_2structures_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/group__kl__neighborhood__stochbt.md5 ViennaRNA-2.5.0/doc/latex/naview_8h_source.tex ViennaRNA-2.5.0/doc/latex/external_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/group__struct__utils__dot__bracket.tex ViennaRNA-2.5.0/doc/latex/constraints__hard_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__struct__utils__deprecated.md5 ViennaRNA-2.5.0/doc/latex/perturbation__fold_8h_source.tex ViennaRNA-2.5.0/doc/latex/interior__loops_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/BoyerMoore_8h.tex ViennaRNA-2.5.0/doc/latex/snoop_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__kl__neighborhood__mfe.tex ViennaRNA-2.5.0/doc/latex/bibTmpFile_1.bib ViennaRNA-2.5.0/doc/latex/perturbation__fold_8h.tex ViennaRNA-2.5.0/doc/latex/group__alignment__plots.tex ViennaRNA-2.5.0/doc/latex/group__energy__parameters__convert.pdf ViennaRNA-2.5.0/doc/latex/group__kl__neighborhood__stochbt.tex ViennaRNA-2.5.0/doc/latex/landscape_2walk_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/perturbation__fold_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/group__constraints__ligand.tex ViennaRNA-2.5.0/doc/latex/group__landscape.md5 ViennaRNA-2.5.0/doc/latex/group__class__fold.pdf ViennaRNA-2.5.0/doc/latex/duplex_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/part__func_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/constraints__soft_8h_source.tex ViennaRNA-2.5.0/doc/latex/subopt_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/external_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/params_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/energy__par_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/constraints__hard_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/structTwoDpfold__vars__coll__graph.md5 ViennaRNA-2.5.0/doc/latex/group__pseudoknots.md5 ViennaRNA-2.5.0/doc/latex/strings_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/plot__structure_8h.tex ViennaRNA-2.5.0/doc/latex/utils_2basic_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/GCrecursion.pdf ViennaRNA-2.5.0/doc/latex/group__search__utils.pdf ViennaRNA-2.5.0/doc/latex/group__subopt__wuchty.pdf ViennaRNA-2.5.0/doc/latex/move_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/fold__vars_8h.tex ViennaRNA-2.5.0/doc/latex/landscape_2neighbor_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/group__mfe.md5 ViennaRNA-2.5.0/doc/latex/group__eval__loops.md5 ViennaRNA-2.5.0/doc/latex/constraints__SHAPE_8h.tex ViennaRNA-2.5.0/doc/latex/constraints__ligand_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/recursions.pdf ViennaRNA-2.5.0/doc/latex/mfe_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/group__heap__utils.tex ViennaRNA-2.5.0/doc/latex/datastructures_2stream__output_8h_source.tex ViennaRNA-2.5.0/doc/latex/fold__compound_8h_source.tex ViennaRNA-2.5.0/doc/latex/sequence_8h.tex ViennaRNA-2.5.0/doc/latex/constants_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/multibranch_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/1_88_84__intloops_8h.tex ViennaRNA-2.5.0/doc/latex/special__const_8h_source.tex ViennaRNA-2.5.0/doc/latex/stringdist_8h.tex ViennaRNA-2.5.0/doc/latex/utils_2structures_8h_source.tex ViennaRNA-2.5.0/doc/latex/zscore_8h_source.tex ViennaRNA-2.5.0/doc/latex/profiledist_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/deprecated.tex ViennaRNA-2.5.0/doc/latex/paths_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/neighbor_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/units_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__eval__move.pdf ViennaRNA-2.5.0/doc/latex/group__subopt__zuker.md5 ViennaRNA-2.5.0/doc/latex/constraints_2basic_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/group__hard__constraints.tex ViennaRNA-2.5.0/doc/latex/file__utils_8h_source.tex ViennaRNA-2.5.0/doc/latex/fold_8h.tex ViennaRNA-2.5.0/doc/latex/RNAturtle_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/loop__energies_8h.tex ViennaRNA-2.5.0/doc/latex/group__domains__struc.md5 ViennaRNA-2.5.0/doc/latex/plotting_2utils_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/edit__cost_8h.tex ViennaRNA-2.5.0/doc/latex/group__struct__utils__metrics.md5 ViennaRNA-2.5.0/doc/latex/constraints_2basic_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/energy__const_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__cofold.tex ViennaRNA-2.5.0/doc/latex/intl11dH_8h_source.tex ViennaRNA-2.5.0/doc/latex/SHAPE_8h_source.tex ViennaRNA-2.5.0/doc/latex/pk__plex_8h.tex ViennaRNA-2.5.0/doc/latex/io_2utils_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/all_8h.tex ViennaRNA-2.5.0/doc/latex/2Dfold_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__grammar.tex ViennaRNA-2.5.0/doc/latex/RNApuzzler_8h.tex ViennaRNA-2.5.0/doc/latex/decomp_ext_stem.pdf ViennaRNA-2.5.0/doc/latex/group__combinatorics__utils.pdf ViennaRNA-2.5.0/doc/latex/naview_8h.tex ViennaRNA-2.5.0/doc/latex/group__dos.md5 ViennaRNA-2.5.0/doc/latex/landscape_2findpath_8h_source.tex ViennaRNA-2.5.0/doc/latex/structTwoDpfold__vars__coll__graph.pdf ViennaRNA-2.5.0/doc/latex/group__domains__up.tex ViennaRNA-2.5.0/doc/latex/eval_8h.tex ViennaRNA-2.5.0/doc/latex/loop__energies_8h_source.tex ViennaRNA-2.5.0/doc/latex/combinatorics_8h_source.tex ViennaRNA-2.5.0/doc/latex/naview_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/group__mfe__backtracking.pdf ViennaRNA-2.5.0/doc/latex/constants_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/commands_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/MEA_8h.tex ViennaRNA-2.5.0/doc/latex/alphabet_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/group__struct__utils__wuss.tex ViennaRNA-2.5.0/doc/latex/structvrna__alignment__s__coll__graph.md5 ViennaRNA-2.5.0/doc/latex/concentrations_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/constraints__ligand_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__eval__loops__hp.md5 ViennaRNA-2.5.0/doc/latex/ligand_8h.tex ViennaRNA-2.5.0/doc/latex/plot__layouts_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/group__mfe__global__deprecated.tex ViennaRNA-2.5.0/doc/latex/part__func__co_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__mea__fold.tex ViennaRNA-2.5.0/doc/latex/group__neighbors.tex ViennaRNA-2.5.0/doc/latex/stringdist_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/walk_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__paths__walk.tex ViennaRNA-2.5.0/doc/latex/decomp_ext_stem_ext.eps ViennaRNA-2.5.0/doc/latex/decomp_il.eps ViennaRNA-2.5.0/doc/latex/group__subopt__wuchty.tex ViennaRNA-2.5.0/doc/latex/utils_2structures_8h.tex ViennaRNA-2.5.0/doc/latex/structure__utils_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__plotting__utils.tex ViennaRNA-2.5.0/doc/latex/decomp_ml_stem.pdf ViennaRNA-2.5.0/doc/latex/group__file__formats__msa.md5 ViennaRNA-2.5.0/doc/latex/group__plot__layout__utils.pdf ViennaRNA-2.5.0/doc/latex/group__plot__layout__utils.md5 ViennaRNA-2.5.0/doc/latex/part__func_8h.tex ViennaRNA-2.5.0/doc/latex/structvrna__dimer__conc__s.tex ViennaRNA-2.5.0/doc/latex/file__formats_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/plot__aln_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/datastructures_2char__stream_8h_source.tex ViennaRNA-2.5.0/doc/latex/file__formats_8h_source.tex ViennaRNA-2.5.0/doc/latex/mfe__window_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/group__mfe__global__deprecated.md5 ViennaRNA-2.5.0/doc/latex/concentrations_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/energy__par_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/group__kl__neighborhood__pf.md5 ViennaRNA-2.5.0/doc/latex/datastructures_2basic_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/group__pseudoknots.pdf ViennaRNA-2.5.0/doc/latex/constraints_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/structLIST__coll__graph.pdf ViennaRNA-2.5.0/doc/latex/constraints__soft_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/group__struct__utils__helix__list.tex ViennaRNA-2.5.0/doc/latex/group__neighbors.md5 ViennaRNA-2.5.0/doc/latex/move__set_8h_source.tex ViennaRNA-2.5.0/doc/latex/plotting_2utils_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/boltzmann__sampling_8h_source.tex ViennaRNA-2.5.0/doc/latex/convert__epars_8h_source.tex ViennaRNA-2.5.0/doc/latex/subopt__zuker_8h_source.tex ViennaRNA-2.5.0/doc/latex/hairpin__loops_8h_source.tex ViennaRNA-2.5.0/doc/latex/convert__epars_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/move_8h.tex ViennaRNA-2.5.0/doc/latex/group__up__cofold.pdf ViennaRNA-2.5.0/doc/latex/treedist_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__centroid__fold.pdf ViennaRNA-2.5.0/doc/latex/group__struct__utils__plist.pdf ViennaRNA-2.5.0/doc/latex/utils_2alignments_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/gquad_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/plot__utils_8h_source.tex ViennaRNA-2.5.0/doc/latex/findpath_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/group__probing__data.pdf ViennaRNA-2.5.0/doc/latex/alifold_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/group__energy__parameters__rw.md5 ViennaRNA-2.5.0/doc/latex/group__struct__utils__deprecated.pdf ViennaRNA-2.5.0/doc/latex/probabilities_8h.tex ViennaRNA-2.5.0/doc/latex/treedist_8h.tex ViennaRNA-2.5.0/doc/latex/file__formats_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/dist__vars_8h_source.tex ViennaRNA-2.5.0/doc/latex/io_2utils_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/decomp_ml.eps ViennaRNA-2.5.0/doc/latex/group__part__func__window.pdf ViennaRNA-2.5.0/doc/latex/group__eval__loops__int.tex ViennaRNA-2.5.0/doc/latex/structvrna__path__s__coll__graph.pdf ViennaRNA-2.5.0/doc/latex/2Dfold_8h.tex ViennaRNA-2.5.0/doc/latex/group__annotation__utils.tex ViennaRNA-2.5.0/doc/latex/energy__par_8h_source.tex ViennaRNA-2.5.0/doc/latex/1_88_84__epars_8h.tex ViennaRNA-2.5.0/doc/latex/eval_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/grammar_8h.tex ViennaRNA-2.5.0/doc/latex/datastructures_2basic_8h_source.tex ViennaRNA-2.5.0/doc/latex/gquad_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/structvrna__sc__motif__s.tex ViennaRNA-2.5.0/doc/latex/group__mfe__window__deprecated.md5 ViennaRNA-2.5.0/doc/latex/char__stream_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__hash__table__utils.tex ViennaRNA-2.5.0/doc/latex/internal_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__centroid__fold.tex ViennaRNA-2.5.0/doc/latex/default_8h_source.tex ViennaRNA-2.5.0/doc/latex/part__func__up_8h_source.tex ViennaRNA-2.5.0/doc/latex/params_2basic_8h_source.tex ViennaRNA-2.5.0/doc/latex/structvrna__dotplot__auxdata__t__coll__graph.md5 ViennaRNA-2.5.0/doc/latex/plot__structure_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/constraints_2basic_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/profiledist_8h.tex ViennaRNA-2.5.0/doc/latex/file__formats__msa_8h.tex ViennaRNA-2.5.0/doc/latex/group__struct__utils.md5 ViennaRNA-2.5.0/doc/latex/plot__structure_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/pair__mat_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__struct__utils__abstract__shapes.md5 ViennaRNA-2.5.0/doc/latex/group__mfe.pdf ViennaRNA-2.5.0/doc/latex/params_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__landscape.tex ViennaRNA-2.5.0/doc/latex/tabu_doxygen.sty ViennaRNA-2.5.0/doc/latex/group__struct__utils__plist.tex ViennaRNA-2.5.0/doc/latex/decomp_ml_ml_ml.pdf ViennaRNA-2.5.0/doc/latex/structure__utils_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/part__func__window_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/group__soft__constraints.tex ViennaRNA-2.5.0/doc/latex/internal_8h_source.tex ViennaRNA-2.5.0/doc/latex/plotting_2structures_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/structTwoDfold__vars__coll__graph.md5 ViennaRNA-2.5.0/doc/latex/mm_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__gquads.md5 ViennaRNA-2.5.0/doc/latex/decomp_il.pdf ViennaRNA-2.5.0/doc/latex/landscape_2walk_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/io_2file__formats_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/combinatorics_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/io_2file__formats__msa_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/alphabet_8h_source.tex ViennaRNA-2.5.0/doc/latex/cofold_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/file__formats__msa_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/decomp_ml_ml.eps ViennaRNA-2.5.0/doc/latex/LPfold_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__aln__utils__deprecated.md5 ViennaRNA-2.5.0/doc/latex/utils_2structures_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/constraints__ligand_8h.tex ViennaRNA-2.5.0/doc/latex/combinatorics_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__constraints.tex ViennaRNA-2.5.0/doc/latex/group__perturbation.pdf ViennaRNA-2.5.0/doc/latex/stringdist_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/vrna__config_8h_source.tex ViennaRNA-2.5.0/doc/latex/RNAturtle_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__buffer__utils.md5 ViennaRNA-2.5.0/doc/latex/group__constraints.pdf ViennaRNA-2.5.0/doc/latex/ribo_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/loop_decomposition.eps ViennaRNA-2.5.0/doc/latex/group__inverse__fold.tex ViennaRNA-2.5.0/doc/latex/group__dos.pdf ViennaRNA-2.5.0/doc/latex/group__part__func__window__deprecated.tex ViennaRNA-2.5.0/doc/latex/plotting_2naview_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/unstructured__domains_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/constraints_2basic_8h.tex ViennaRNA-2.5.0/doc/latex/utils_8h.tex ViennaRNA-2.5.0/doc/latex/group__struct__utils.pdf ViennaRNA-2.5.0/doc/latex/group__buffer__utils.tex ViennaRNA-2.5.0/doc/latex/svm__utils_8h.tex ViennaRNA-2.5.0/doc/latex/group__kl__neighborhood__mfe.md5 ViennaRNA-2.5.0/doc/latex/internal_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/ligand_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/file__formats_8h.tex ViennaRNA-2.5.0/doc/latex/params_2basic_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__eval__loops__hp.pdf ViennaRNA-2.5.0/doc/latex/strings_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/structvrna__path__s__coll__graph.md5 ViennaRNA-2.5.0/doc/latex/subopt_8h.tex ViennaRNA-2.5.0/doc/latex/group__part__func__window__deprecated.pdf ViennaRNA-2.5.0/doc/latex/plotting_2structures_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/SHAPE_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/constraints_8h.tex ViennaRNA-2.5.0/doc/latex/group__message__utils.md5 ViennaRNA-2.5.0/doc/latex/aln__util_8h.tex ViennaRNA-2.5.0/doc/latex/file__utils_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/structLST__BUCKET.tex ViennaRNA-2.5.0/doc/latex/ribo_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/energy__par_8h.tex ViennaRNA-2.5.0/doc/latex/group__aln__utils__deprecated.tex ViennaRNA-2.5.0/doc/latex/shift_move_intervals.pdf ViennaRNA-2.5.0/doc/latex/group__centroid__fold.md5 ViennaRNA-2.5.0/doc/latex/convert_8h_source.tex ViennaRNA-2.5.0/doc/latex/hard_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/utils_2basic_8h_source.tex ViennaRNA-2.5.0/doc/latex/io_2utils_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/2Dpfold_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__part__func__global__deprecated.md5 ViennaRNA-2.5.0/doc/latex/Crecursion.pdf ViennaRNA-2.5.0/doc/latex/group__eval__loops.pdf ViennaRNA-2.5.0/doc/latex/utils_2units_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/group__dp__matrices.pdf ViennaRNA-2.5.0/doc/latex/datastructures_2char__stream_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/constants_8h.tex ViennaRNA-2.5.0/doc/latex/group__annotation__utils.pdf ViennaRNA-2.5.0/doc/latex/group__thermodynamics.pdf ViennaRNA-2.5.0/doc/latex/group__command__files.md5 ViennaRNA-2.5.0/doc/latex/structLST__BUCKET__coll__graph.pdf ViennaRNA-2.5.0/doc/latex/landscape_2neighbor_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__hard__constraints.pdf ViennaRNA-2.5.0/doc/latex/hairpin__loops_8h.tex ViennaRNA-2.5.0/doc/latex/neighbor_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/treedist_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/hairpin_8h_source.tex ViennaRNA-2.5.0/doc/latex/fold__vars_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/group__dp__matrices.tex ViennaRNA-2.5.0/doc/latex/group__eval__loops.tex ViennaRNA-2.5.0/doc/latex/mfe_8h_source.tex ViennaRNA-2.5.0/doc/latex/pf__multifold_8h_source.tex ViennaRNA-2.5.0/doc/latex/duplex_8h.tex ViennaRNA-2.5.0/doc/latex/constants_8h_source.tex ViennaRNA-2.5.0/doc/latex/landscape_2findpath_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/params_2basic_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/units_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/RNAturtle_8h.tex ViennaRNA-2.5.0/doc/latex/probabilities_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/plot__aln_8h.tex ViennaRNA-2.5.0/doc/latex/findpath_8h.tex ViennaRNA-2.5.0/doc/latex/ProfileAln_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__string__utils.pdf ViennaRNA-2.5.0/doc/latex/profiledist_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__thermodynamics.tex ViennaRNA-2.5.0/doc/latex/decomp_ml_coaxial.eps ViennaRNA-2.5.0/doc/latex/multibranch_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/structvrna__alignment__s__coll__graph.pdf ViennaRNA-2.5.0/doc/latex/plotting_2structures_8h.tex ViennaRNA-2.5.0/doc/latex/group__struct__utils__metrics.pdf ViennaRNA-2.5.0/doc/latex/utils_2basic_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/datastructures_2char__stream_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/PS__dot_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/utils_2basic_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/part__func_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/group__paths__direct.md5 ViennaRNA-2.5.0/doc/latex/io_8h.tex ViennaRNA-2.5.0/doc/latex/equilibrium__probs_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__plotting__utils__deprecated.pdf ViennaRNA-2.5.0/doc/latex/internal_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/decomp_ext_ext.pdf ViennaRNA-2.5.0/doc/latex/dist__vars_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/landscape_2walk_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/plotting_2alignments_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/structLIST.tex ViennaRNA-2.5.0/doc/latex/index.tex ViennaRNA-2.5.0/doc/latex/mfe_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/decomp_ml_ml.pdf ViennaRNA-2.5.0/doc/latex/io.tex ViennaRNA-2.5.0/doc/latex/group__probing__data.tex ViennaRNA-2.5.0/doc/latex/group__alphabet__utils.tex ViennaRNA-2.5.0/doc/latex/recursions.eps ViennaRNA-2.5.0/doc/latex/heap_8h.tex ViennaRNA-2.5.0/doc/latex/equilibrium__probs_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/group__units.pdf ViennaRNA-2.5.0/doc/latex/group__fold__compound.md5 ViennaRNA-2.5.0/doc/latex/group__file__utils.md5 ViennaRNA-2.5.0/doc/latex/decomp_ext_stem_ext.pdf ViennaRNA-2.5.0/doc/latex/MEA_8h_source.tex ViennaRNA-2.5.0/doc/latex/structTwoDpfold__vars.tex ViennaRNA-2.5.0/doc/latex/group__fold__compound.pdf ViennaRNA-2.5.0/doc/latex/plot__aln_8h_source.tex ViennaRNA-2.5.0/doc/latex/plotting_2utils_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/hairpin__loops_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/structvrna__data__linear__s__coll__graph.pdf ViennaRNA-2.5.0/doc/latex/datastructures_2char__stream_8h.tex ViennaRNA-2.5.0/doc/latex/getting_started.tex ViennaRNA-2.5.0/doc/latex/svm__utils_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/constraints__ligand_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/subopt_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/group__subopt__and__representatives.pdf ViennaRNA-2.5.0/doc/latex/structLIST__coll__graph.md5 ViennaRNA-2.5.0/doc/latex/structured__domains_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/constraints__soft_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__eval__deprecated.tex ViennaRNA-2.5.0/doc/latex/plot__aln_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/group__file__utils.pdf ViennaRNA-2.5.0/doc/latex/refman.tex ViennaRNA-2.5.0/doc/latex/group__struct__utils__pair__table.pdf ViennaRNA-2.5.0/doc/latex/datastructures_2basic_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/gquad_8h_source.tex ViennaRNA-2.5.0/doc/latex/commands_8h.tex ViennaRNA-2.5.0/doc/latex/paths_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/group__struct__utils__deprecated.tex ViennaRNA-2.5.0/doc/latex/multibranch_8h.tex ViennaRNA-2.5.0/doc/latex/group__data__structures.tex ViennaRNA-2.5.0/doc/latex/group__domains.md5 ViennaRNA-2.5.0/doc/latex/group__paired__modules.tex ViennaRNA-2.5.0/doc/latex/annotated.tex ViennaRNA-2.5.0/doc/latex/group__paired__modules.pdf ViennaRNA-2.5.0/doc/latex/GCrecursion.eps ViennaRNA-2.5.0/doc/latex/hash__tables_8h_source.tex ViennaRNA-2.5.0/doc/latex/cofold_8h_source.tex ViennaRNA-2.5.0/doc/latex/hairpin_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/grammar_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/group__paths__deprecated.md5 ViennaRNA-2.5.0/doc/latex/sequence_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/structured__domains_8h.tex ViennaRNA-2.5.0/doc/latex/datastructures_2stream__output_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/group__paths__walk.md5 ViennaRNA-2.5.0/doc/latex/structvrna__subopt__sol__s.tex ViennaRNA-2.5.0/doc/latex/group__pf__fold.md5 ViennaRNA-2.5.0/doc/latex/fold__vars_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/structvrna__dotplot__auxdata__t__coll__graph.pdf ViennaRNA-2.5.0/doc/latex/landscape_2neighbor_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__domains__up.pdf ViennaRNA-2.5.0/doc/latex/group__search__utils.tex ViennaRNA-2.5.0/doc/latex/structnode__coll__graph.pdf ViennaRNA-2.5.0/doc/latex/io_2file__formats_8h.tex ViennaRNA-2.5.0/doc/latex/Lfold_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/group__energy__parameters__convert.md5 ViennaRNA-2.5.0/doc/latex/group__hard__constraints.md5 ViennaRNA-2.5.0/doc/latex/2Dpfold_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/utilities.tex ViennaRNA-2.5.0/doc/latex/group__constraints.md5 ViennaRNA-2.5.0/doc/latex/group__struct__utils__metrics.tex ViennaRNA-2.5.0/doc/latex/boltzmann__sampling_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/boltzmann__sampling_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/cofold_8h.tex ViennaRNA-2.5.0/doc/latex/grammar_8h_source.tex ViennaRNA-2.5.0/doc/latex/B_prod_rule.eps ViennaRNA-2.5.0/doc/latex/alifold_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__grammar.pdf ViennaRNA-2.5.0/doc/latex/group__struct__utils__pair__table.md5 ViennaRNA-2.5.0/doc/latex/hairpin_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/walk_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/pk__plex_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/group__landscape.pdf ViennaRNA-2.5.0/doc/latex/group__heap__utils.md5 ViennaRNA-2.5.0/doc/latex/soft_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/structvrna__exp__param__s__coll__graph.md5 ViennaRNA-2.5.0/doc/latex/data__structures_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/group__mfe__window__deprecated.pdf ViennaRNA-2.5.0/doc/latex/heat__capacity_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__eval__deprecated.md5 ViennaRNA-2.5.0/doc/latex/group__mea__fold.md5 ViennaRNA-2.5.0/doc/latex/group__pseudoknots.tex ViennaRNA-2.5.0/doc/latex/svm__utils_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__SHAPE__reactivities.tex ViennaRNA-2.5.0/doc/latex/group__string__utils.tex ViennaRNA-2.5.0/doc/latex/energy__const_8h.tex ViennaRNA-2.5.0/doc/latex/utils_2basic_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/io_2file__formats_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/landscape_2findpath_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/centroid_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/strings_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/group__soft__constraints.md5 ViennaRNA-2.5.0/doc/latex/group__utils.md5 ViennaRNA-2.5.0/doc/latex/decomp_hp.pdf ViennaRNA-2.5.0/doc/latex/decomp_ml_ml_ml.eps ViennaRNA-2.5.0/doc/latex/group__subopt__stochbt__deprecated.md5 ViennaRNA-2.5.0/doc/latex/group__model__details.md5 ViennaRNA-2.5.0/doc/latex/group__plotting__utils.md5 ViennaRNA-2.5.0/doc/latex/eval_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/constraints_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__eval__loops__int.md5 ViennaRNA-2.5.0/doc/latex/plot__utils_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/subopt_8h_source.tex ViennaRNA-2.5.0/doc/latex/decomp_ml_ml_stem.eps ViennaRNA-2.5.0/doc/latex/RNApuzzler_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/constraints__hard_8h.tex ViennaRNA-2.5.0/doc/latex/decomp_ext_ext_stem1.eps ViennaRNA-2.5.0/doc/latex/sequence_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/internal_8h.tex ViennaRNA-2.5.0/doc/latex/strings_8h.tex ViennaRNA-2.5.0/doc/latex/energy__const_8h_source.tex ViennaRNA-2.5.0/doc/latex/concentrations_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/mfe__window_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/commands_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/alphabet_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/mfe__window_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/2Dpfold_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__up__cofold.md5 ViennaRNA-2.5.0/doc/latex/files.tex ViennaRNA-2.5.0/doc/latex/group__energy__parameters.pdf ViennaRNA-2.5.0/doc/latex/group__annotation__utils.md5 ViennaRNA-2.5.0/doc/latex/string__utils_8h_source.tex ViennaRNA-2.5.0/doc/latex/shift_move_intervals.eps ViennaRNA-2.5.0/doc/latex/landscape_2findpath_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/heat__capacity_8h.tex ViennaRNA-2.5.0/doc/latex/aln__util_8h_source.tex ViennaRNA-2.5.0/doc/latex/SHAPE_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/group__subopt__stochbt.tex ViennaRNA-2.5.0/doc/latex/subopt_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/loop_types.pdf ViennaRNA-2.5.0/doc/latex/group__paths__walk.pdf ViennaRNA-2.5.0/doc/latex/grammar_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/plotting_2utils_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/group__energy__parameters__rw.pdf ViennaRNA-2.5.0/doc/latex/part__func__up_8h.tex ViennaRNA-2.5.0/doc/latex/loop_types.eps ViennaRNA-2.5.0/doc/latex/group__up__cofold.tex ViennaRNA-2.5.0/doc/latex/part__func__window_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/stringdist_8h_source.tex ViennaRNA-2.5.0/doc/latex/intl22dH_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__ligands__up.tex ViennaRNA-2.5.0/doc/latex/read__epars_8h.tex ViennaRNA-2.5.0/doc/latex/group__mfe__window.pdf ViennaRNA-2.5.0/doc/latex/SHAPE_8h.tex ViennaRNA-2.5.0/doc/latex/group__kl__neighborhood.md5 ViennaRNA-2.5.0/doc/latex/group__ligands__up.pdf ViennaRNA-2.5.0/doc/latex/string__utils_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/datastructures_2char__stream_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/RNAturtle_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/aln__util_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/walk_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__subopt__stochbt__deprecated.tex ViennaRNA-2.5.0/doc/latex/io_2utils_8h_source.tex ViennaRNA-2.5.0/doc/latex/io_8h_source.tex ViennaRNA-2.5.0/doc/latex/exterior__loops_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/hairpin_8h.tex ViennaRNA-2.5.0/doc/latex/structvrna__move__s__coll__graph.pdf ViennaRNA-2.5.0/doc/latex/group__eval__loops__int.pdf ViennaRNA-2.5.0/doc/latex/part__func__up_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/layouts_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__mfe__window.tex ViennaRNA-2.5.0/doc/latex/group__kl__neighborhood.tex ViennaRNA-2.5.0/doc/latex/LPfold_8h.tex ViennaRNA-2.5.0/doc/latex/intl22_8h_source.tex ViennaRNA-2.5.0/doc/latex/mfe__window_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__thermodynamics.md5 ViennaRNA-2.5.0/doc/latex/plot__utils_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/concepts.tex ViennaRNA-2.5.0/doc/latex/group__eval__deprecated.pdf ViennaRNA-2.5.0/doc/latex/RNApuzzler_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/structvrna__move__s__coll__graph.md5 ViennaRNA-2.5.0/doc/latex/pk__plex_8h_source.tex ViennaRNA-2.5.0/doc/latex/loop__energies_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/2Dfold_8h_source.tex ViennaRNA-2.5.0/doc/latex/centroid_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/group__paths__deprecated.pdf ViennaRNA-2.5.0/doc/latex/neighbor_8h_source.tex ViennaRNA-2.5.0/doc/latex/unstructured__domains_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/soft_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/group__part__func__window__deprecated.md5 ViennaRNA-2.5.0/doc/latex/group__subopt__stochbt__deprecated.pdf ViennaRNA-2.5.0/doc/latex/dp__matrices_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__eval__loops__mb.md5 ViennaRNA-2.5.0/doc/latex/group__dos.tex ViennaRNA-2.5.0/doc/latex/constraints_2basic_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/structvrna__sc__bp__storage__t.tex ViennaRNA-2.5.0/doc/latex/ugly__bt_8h_source.tex ViennaRNA-2.5.0/doc/latex/datastructures_2char__stream_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/part__func__window_8h_source.tex ViennaRNA-2.5.0/doc/latex/file__utils_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/heat__capacity_8h_source.tex ViennaRNA-2.5.0/doc/latex/decomp_hp.eps ViennaRNA-2.5.0/doc/latex/io_2utils_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/group__fold__compound.tex ViennaRNA-2.5.0/doc/latex/group__search__utils.md5 ViennaRNA-2.5.0/doc/latex/group__kl__neighborhood__mfe.pdf ViennaRNA-2.5.0/doc/latex/md_CHANGELOG.tex ViennaRNA-2.5.0/doc/latex/decomp_ml.pdf ViennaRNA-2.5.0/doc/latex/group__combinatorics__utils.md5 ViennaRNA-2.5.0/doc/latex/group__subopt__and__representatives.tex ViennaRNA-2.5.0/doc/latex/stream__output_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/MEA_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/part__func__window_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/alphabet_8h.tex ViennaRNA-2.5.0/doc/latex/plot__layouts_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/structvrna__param__s__coll__graph.pdf ViennaRNA-2.5.0/doc/latex/group__pf__cofold.tex ViennaRNA-2.5.0/doc/latex/structTree__coll__graph.pdf ViennaRNA-2.5.0/doc/latex/energy__const_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/group__soft__constraints.pdf ViennaRNA-2.5.0/doc/latex/plex_8h_source.tex ViennaRNA-2.5.0/doc/latex/higher__order__functions_8h_source.tex ViennaRNA-2.5.0/doc/latex/structured__domains_8h_source.tex ViennaRNA-2.5.0/doc/latex/centroid_8h.tex ViennaRNA-2.5.0/doc/latex/group__pf__fold.pdf ViennaRNA-2.5.0/doc/latex/group__struct__utils__tree.md5 ViennaRNA-2.5.0/doc/latex/group__kl__neighborhood.pdf ViennaRNA-2.5.0/doc/latex/convert_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/group__constraints__ligand.md5 ViennaRNA-2.5.0/doc/latex/Lfold_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__mfe.tex ViennaRNA-2.5.0/doc/latex/group__struct__utils__helix__list.pdf ViennaRNA-2.5.0/doc/latex/datastructures_2stream__output_8h.tex ViennaRNA-2.5.0/doc/latex/landscape_2walk_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/treedist_8h_source.tex ViennaRNA-2.5.0/doc/latex/multibranch__loops_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/file__utils_8h.tex ViennaRNA-2.5.0/doc/latex/group__constraints__ligand.pdf ViennaRNA-2.5.0/doc/latex/plotting_2alignments_8h.tex ViennaRNA-2.5.0/doc/latex/group__struct__utils__abstract__shapes.pdf ViennaRNA-2.5.0/doc/latex/structLST__BUCKET__coll__graph.md5 ViennaRNA-2.5.0/doc/latex/longtable_doxygen.sty ViennaRNA-2.5.0/doc/latex/SHAPE_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/group__aln__utils__deprecated.pdf ViennaRNA-2.5.0/doc/latex/exterior__loops_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/2Dfold_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/group__hash__table__utils.pdf ViennaRNA-2.5.0/doc/latex/modules.tex ViennaRNA-2.5.0/doc/latex/io_2file__formats_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/pk__plex_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/external_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__SHAPE__reactivities.pdf ViennaRNA-2.5.0/doc/latex/group__energy__parameters.tex ViennaRNA-2.5.0/doc/latex/unstructured__domains_8h_source.tex ViennaRNA-2.5.0/doc/latex/landscape_2findpath_8h.tex ViennaRNA-2.5.0/doc/latex/units_8h.tex ViennaRNA-2.5.0/doc/latex/PS__dot_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/structvrna__unstructured__domain__motif__s.tex ViennaRNA-2.5.0/doc/latex/structvrna__exp__param__s__coll__graph.pdf ViennaRNA-2.5.0/doc/latex/group__pf__cofold.md5 ViennaRNA-2.5.0/doc/latex/pk__plex_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__paired__modules.md5 ViennaRNA-2.5.0/doc/latex/group__struct__utils__helix__list.md5 ViennaRNA-2.5.0/doc/latex/utils_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/findpath_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__domains.pdf ViennaRNA-2.5.0/doc/latex/intl11_8h_source.tex ViennaRNA-2.5.0/doc/latex/LPfold_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/constraints__hard_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__data__structures.md5 ViennaRNA-2.5.0/doc/latex/part__func_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__eval__loops__ext.pdf ViennaRNA-2.5.0/doc/latex/group__eval__loops__mb.pdf ViennaRNA-2.5.0/doc/latex/group__alignment__plots.md5 ViennaRNA-2.5.0/doc/latex/grammar_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/citelist.tex ViennaRNA-2.5.0/doc/latex/heap_8h_source.tex ViennaRNA-2.5.0/doc/latex/decomp_ml_stem.eps ViennaRNA-2.5.0/doc/latex/centroid_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__subopt__stochbt.md5 ViennaRNA-2.5.0/doc/latex/stream__output_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/group__eval__loops__mb.tex ViennaRNA-2.5.0/doc/latex/equilibrium__probs_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/units_8h_source.tex ViennaRNA-2.5.0/doc/latex/eval_8h_source.tex ViennaRNA-2.5.0/doc/latex/api_features.tex ViennaRNA-2.5.0/doc/latex/utils_2units_8h.tex ViennaRNA-2.5.0/doc/latex/subopt_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/char__stream_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/landscape_2findpath_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/perturbation__fold_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/inverse_8h_source.tex ViennaRNA-2.5.0/doc/latex/fold__compound_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/neighbor_8h.tex ViennaRNA-2.5.0/doc/latex/fold_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/structvrna__data__linear__s__coll__graph.md5 ViennaRNA-2.5.0/doc/latex/params_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/plotting_2alignments_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__pf__cofold.pdf ViennaRNA-2.5.0/doc/latex/utils_2units_8h_source.tex ViennaRNA-2.5.0/doc/latex/paths_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/plotting_2naview_8h.tex ViennaRNA-2.5.0/doc/latex/group__domains__struc.tex ViennaRNA-2.5.0/doc/latex/all_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/utils_2alignments_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/utils_2alignments_8h.tex ViennaRNA-2.5.0/doc/latex/group__struct__utils__dot__bracket.md5 ViennaRNA-2.5.0/doc/latex/hard_8h.tex ViennaRNA-2.5.0/doc/latex/dp__matrices_8h.tex ViennaRNA-2.5.0/doc/latex/group__mfe__global.pdf ViennaRNA-2.5.0/doc/latex/string__utils_8h.tex ViennaRNA-2.5.0/doc/latex/group__kl__neighborhood__pf.tex ViennaRNA-2.5.0/doc/latex/sequence_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__paths__direct.pdf ViennaRNA-2.5.0/doc/latex/group__file__formats.tex ViennaRNA-2.5.0/doc/latex/fold_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/plot__layouts_8h_source.tex ViennaRNA-2.5.0/doc/latex/external_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/decomp_ml_coaxial.pdf ViennaRNA-2.5.0/doc/latex/decomp_ml_ml_stem.pdf ViennaRNA-2.5.0/doc/latex/ligand_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/io_2file__formats_8h_source.tex ViennaRNA-2.5.0/doc/latex/concentrations_8h.tex ViennaRNA-2.5.0/doc/latex/group__domains.tex ViennaRNA-2.5.0/doc/latex/soft_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__plot__layout__utils.tex ViennaRNA-2.5.0/doc/latex/group__mfe__global.md5 ViennaRNA-2.5.0/doc/latex/group__alphabet__utils.pdf ViennaRNA-2.5.0/doc/latex/soft_8h.tex ViennaRNA-2.5.0/doc/latex/io_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/part__func__window_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/stream__output_8h.tex ViennaRNA-2.5.0/doc/latex/decomp_ext_ext_stem.eps ViennaRNA-2.5.0/doc/latex/group__eval.pdf ViennaRNA-2.5.0/doc/latex/plot__structure_8h_source.tex ViennaRNA-2.5.0/doc/latex/plot__utils_8h.tex ViennaRNA-2.5.0/doc/latex/boltzmann__sampling_8h.tex ViennaRNA-2.5.0/doc/latex/constants_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/paths_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/group__cofold.pdf ViennaRNA-2.5.0/doc/latex/group__ligand__binding.tex ViennaRNA-2.5.0/doc/latex/datastructures_2basic_8h.tex ViennaRNA-2.5.0/doc/latex/group__struct__utils__tree.pdf ViennaRNA-2.5.0/doc/latex/structnode__coll__graph.md5 ViennaRNA-2.5.0/doc/latex/decomp_ext_up.pdf ViennaRNA-2.5.0/doc/latex/hard_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__units.tex ViennaRNA-2.5.0/doc/latex/data__structures_8h_source.tex ViennaRNA-2.5.0/doc/latex/constraints__soft_8h.tex ViennaRNA-2.5.0/doc/latex/PS__dot_8h.tex ViennaRNA-2.5.0/doc/latex/multibranch_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/constraints__SHAPE_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__kl__neighborhood__stochbt.pdf ViennaRNA-2.5.0/doc/latex/walk_8h.tex ViennaRNA-2.5.0/doc/latex/model_8h_source.tex ViennaRNA-2.5.0/doc/latex/sequence_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/mfe__multifold_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__energy__parameters__convert.tex ViennaRNA-2.5.0/doc/latex/group__command__files.pdf ViennaRNA-2.5.0/doc/latex/centroid_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/io_2file__formats__msa_8h.tex ViennaRNA-2.5.0/doc/latex/group__paths.tex ViennaRNA-2.5.0/doc/latex/multibranch__loops_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/utils_2structures_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/examples.tex ViennaRNA-2.5.0/doc/latex/probabilities_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/dist__vars_8h.tex ViennaRNA-2.5.0/doc/latex/landscape_2neighbor_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/fold__vars_8h_source.tex ViennaRNA-2.5.0/doc/latex/layouts_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/utils_2alignments_8h_source.tex ViennaRNA-2.5.0/doc/latex/findpath_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__eval__loops__hp.tex ViennaRNA-2.5.0/doc/latex/group__perturbation.tex ViennaRNA-2.5.0/doc/latex/io_2file__formats__msa_8h_source.tex ViennaRNA-2.5.0/doc/latex/interior__loops_8h.tex ViennaRNA-2.5.0/doc/latex/group__file__formats__msa.pdf ViennaRNA-2.5.0/doc/latex/multibranch__loops_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__class__fold.tex ViennaRNA-2.5.0/doc/latex/group__utils.tex ViennaRNA-2.5.0/doc/latex/LPfold_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/intl21_8h_source.tex ViennaRNA-2.5.0/doc/latex/structswString.tex ViennaRNA-2.5.0/doc/latex/naview_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/stream__output_8h_source.tex ViennaRNA-2.5.0/doc/latex/part__func_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__struct__utils__wuss.md5 ViennaRNA-2.5.0/doc/latex/convert_8h.tex ViennaRNA-2.5.0/doc/latex/hairpin_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/params_2basic_8h.tex ViennaRNA-2.5.0/doc/latex/alifold_8h.tex ViennaRNA-2.5.0/doc/latex/io_2file__formats__msa_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__part__func__global__deprecated.pdf ViennaRNA-2.5.0/doc/latex/group__eval__move.md5 ViennaRNA-2.5.0/doc/latex/group__paths.pdf ViennaRNA-2.5.0/doc/latex/RNAstruct_8h_source.tex ViennaRNA-2.5.0/doc/latex/ligand_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__alphabet__utils.md5 ViennaRNA-2.5.0/doc/latex/combinatorics_8h.tex ViennaRNA-2.5.0/doc/latex/datastructures_2basic_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/alphabet_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/structure__utils_8h_source.tex ViennaRNA-2.5.0/doc/latex/B_prod_rule.pdf ViennaRNA-2.5.0/doc/latex/group__utils.pdf ViennaRNA-2.5.0/doc/latex/group__struct__utils__abstract__shapes.tex ViennaRNA-2.5.0/doc/latex/group__probing__data.md5 ViennaRNA-2.5.0/doc/latex/decomp_ext_stem.eps ViennaRNA-2.5.0/doc/latex/alifold_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/layouts_8h.tex ViennaRNA-2.5.0/doc/latex/interior__loops_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/unstructured__domains_8h.tex ViennaRNA-2.5.0/doc/latex/sequence_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/params_2basic_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/multibranch_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__aln__utils.md5 ViennaRNA-2.5.0/doc/latex/cofold_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/utils_2basic_8h.tex ViennaRNA-2.5.0/doc/latex/fold__vars_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/mm_8h_source.tex ViennaRNA-2.5.0/doc/latex/doxygen.sty ViennaRNA-2.5.0/doc/latex/landscape_2neighbor_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/plotting_2utils_8h_source.tex ViennaRNA-2.5.0/doc/latex/Lfold_8h.tex ViennaRNA-2.5.0/doc/latex/group__energy__parameters__rw.tex ViennaRNA-2.5.0/doc/latex/landscape_2neighbor_8h.tex ViennaRNA-2.5.0/doc/latex/dp__matrices_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/group__struct__utils__tree.tex ViennaRNA-2.5.0/doc/latex/convert__epars_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__units.md5 ViennaRNA-2.5.0/doc/latex/hairpin_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/structTwoDfold__vars__coll__graph.pdf ViennaRNA-2.5.0/doc/latex/all_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/soft_8h_source.tex ViennaRNA-2.5.0/doc/latex/char__stream_8h_source.tex ViennaRNA-2.5.0/doc/latex/mfe__window_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/eval_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/utils_2structures_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/group__struct__utils__dot__bracket.pdf ViennaRNA-2.5.0/doc/latex/data__structures_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/1_88_84__intloops_8h_source.tex ViennaRNA-2.5.0/doc/latex/utils_8h_source.tex ViennaRNA-2.5.0/doc/latex/Crecursion.eps ViennaRNA-2.5.0/doc/latex/io_2file__formats_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/fold__compound_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/intl21dH_8h_source.tex ViennaRNA-2.5.0/doc/latex/multibranch_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/data__structures_8h.tex ViennaRNA-2.5.0/doc/latex/group__subopt__and__representatives.md5 ViennaRNA-2.5.0/doc/latex/group__energy__parameters.md5 ViennaRNA-2.5.0/doc/latex/internal_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/io_2file__formats__msa_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/group__string__utils.md5 ViennaRNA-2.5.0/doc/latex/inverse_8h.tex ViennaRNA-2.5.0/doc/latex/edit__cost_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__mea__fold.pdf ViennaRNA-2.5.0/doc/latex/group__part__func__window.md5 ViennaRNA-2.5.0/doc/latex/decomp_ext_ext_ext.pdf ViennaRNA-2.5.0/doc/latex/group__ligand__binding.md5 ViennaRNA-2.5.0/doc/latex/group__alignment__plots.pdf ViennaRNA-2.5.0/doc/latex/group__ligand__binding.pdf ViennaRNA-2.5.0/doc/latex/loop_decomposition.pdf ViennaRNA-2.5.0/doc/latex/group__paths.md5 ViennaRNA-2.5.0/doc/latex/1_88_84__epars_8h_source.tex ViennaRNA-2.5.0/doc/latex/landscape_2walk_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__model__details.pdf ViennaRNA-2.5.0/doc/latex/2Dpfold_8h.tex ViennaRNA-2.5.0/doc/latex/group__ligands__up.md5 ViennaRNA-2.5.0/doc/latex/group__perturbation.md5 ViennaRNA-2.5.0/doc/latex/layouts_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/group__struct__utils.tex ViennaRNA-2.5.0/doc/latex/hard_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__domains__struc.pdf ViennaRNA-2.5.0/doc/latex/group__mfe__window.md5 ViennaRNA-2.5.0/doc/latex/fold__vars_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/dp__matrices_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/group__aln__utils.tex ViennaRNA-2.5.0/doc/latex/mfe_8h.tex ViennaRNA-2.5.0/doc/latex/ligand_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/decomp_ext_ext.eps ViennaRNA-2.5.0/doc/latex/plotting_2structures_8h_source.tex ViennaRNA-2.5.0/doc/latex/eval_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/boltzmann__sampling_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/exterior__loops_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__mfe__global__deprecated.pdf ViennaRNA-2.5.0/doc/latex/read__epars_8h_source.tex ViennaRNA-2.5.0/doc/latex/exterior__loops_8h.tex ViennaRNA-2.5.0/doc/latex/group__eval__move.tex ViennaRNA-2.5.0/doc/latex/RNAstruct_8h.tex ViennaRNA-2.5.0/doc/latex/group__subopt__zuker.tex ViennaRNA-2.5.0/doc/latex/file__formats__msa_8h_source.tex ViennaRNA-2.5.0/doc/latex/dist__vars_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/strings_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/duplex_8h_source.tex ViennaRNA-2.5.0/doc/latex/part__func__up_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__aln__utils.pdf ViennaRNA-2.5.0/doc/latex/duplex_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/SHAPE_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/plotting_2structures_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__buffer__utils.pdf ViennaRNA-2.5.0/doc/latex/group__cofold.md5 ViennaRNA-2.5.0/doc/latex/group__subopt__wuchty.md5 ViennaRNA-2.5.0/doc/latex/all_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/loop__energies_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/utils_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/decomp_ext_ext_stem.pdf ViennaRNA-2.5.0/doc/latex/constraints__SHAPE_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/svm_8h_source.tex ViennaRNA-2.5.0/doc/latex/probabilities_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__subopt__zuker.pdf ViennaRNA-2.5.0/doc/latex/probabilities_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/boltzmann__sampling_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/RNApuzzler_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__file__formats.md5 ViennaRNA-2.5.0/doc/latex/dp__matrices_8h_source.tex ViennaRNA-2.5.0/doc/latex/plotting_2utils_8h.tex ViennaRNA-2.5.0/doc/latex/svm__utils_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__data__structures.pdf ViennaRNA-2.5.0/doc/latex/grammar_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/lists_8h_source.tex ViennaRNA-2.5.0/doc/latex/read__epars_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/group__message__utils.pdf ViennaRNA-2.5.0/doc/latex/group__eval.md5 ViennaRNA-2.5.0/doc/latex/heat__capacity_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/structvrna__sc__s__coll__graph.pdf ViennaRNA-2.5.0/doc/latex/structvrna__fc__s__coll__graph.md5 ViennaRNA-2.5.0/doc/latex/convert_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/ligands_up_callback.pdf ViennaRNA-2.5.0/doc/latex/model_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/params_8h.tex ViennaRNA-2.5.0/doc/latex/multibranch__loops_8h.tex ViennaRNA-2.5.0/doc/latex/group__subopt__stochbt.pdf ViennaRNA-2.5.0/doc/latex/hard_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/equilibrium__probs_8h_source.tex ViennaRNA-2.5.0/doc/latex/ribo_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__message__utils.tex ViennaRNA-2.5.0/doc/latex/io_2utils_8h.tex ViennaRNA-2.5.0/doc/latex/hard_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/aln__util_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/mfe_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/structvrna__param__s__coll__graph.md5 ViennaRNA-2.5.0/doc/latex/group__command__files.tex ViennaRNA-2.5.0/doc/latex/decomp_ml_up.eps ViennaRNA-2.5.0/doc/latex/decomp_ext_ext_ext.eps ViennaRNA-2.5.0/doc/latex/unstructured__domains_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/plotting_2naview_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/external_8h.tex ViennaRNA-2.5.0/doc/latex/fold__compound_8h.tex ViennaRNA-2.5.0/doc/latex/group__part__func__window.tex ViennaRNA-2.5.0/doc/latex/group__hash__table__utils.md5 ViennaRNA-2.5.0/doc/latex/equilibrium__probs_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/concentrations_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/group__plotting__utils.pdf ViennaRNA-2.5.0/doc/latex/read__epars_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/model_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/cpu_8h_source.tex ViennaRNA-2.5.0/doc/latex/model_8h.tex ViennaRNA-2.5.0/doc/latex/data_structures.tex ViennaRNA-2.5.0/doc/latex/Lfold_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/mfe_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/MEA_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__paths__direct.tex ViennaRNA-2.5.0/doc/latex/fold_8h_source.tex ViennaRNA-2.5.0/doc/latex/structure__utils_8h.tex ViennaRNA-2.5.0/doc/latex/group__kl__neighborhood__pf.pdf ViennaRNA-2.5.0/doc/latex/gquad_8h.tex ViennaRNA-2.5.0/doc/latex/plotting_2alignments_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/struct__struct__en.tex ViennaRNA-2.5.0/doc/latex/group__struct__utils__wuss.pdf ViennaRNA-2.5.0/doc/latex/group__part__func__global.md5 ViennaRNA-2.5.0/doc/latex/ligand_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/group__part__func__global__deprecated.tex ViennaRNA-2.5.0/doc/latex/move_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/datastructures_2basic_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__file__utils.tex ViennaRNA-2.5.0/doc/latex/group__gquads.pdf ViennaRNA-2.5.0/doc/latex/group__pf__fold.tex ViennaRNA-2.5.0/doc/latex/dp__matrices_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/move_8h_source.tex ViennaRNA-2.5.0/doc/latex/decomp_ext_ext_stem1.pdf ViennaRNA-2.5.0/doc/latex/structTree__coll__graph.md5 ViennaRNA-2.5.0/doc/latex/concentrations_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__part__func__global.tex ViennaRNA-2.5.0/doc/latex/ali__plex_8h_source.tex ViennaRNA-2.5.0/doc/latex/group__class__fold.md5 ViennaRNA-2.5.0/doc/latex/group__file__formats__msa.tex ViennaRNA-2.5.0/doc/latex/group__paths__deprecated.tex ViennaRNA-2.5.0/doc/latex/datastructures_2stream__output_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/group__mfe__backtracking.md5 ViennaRNA-2.5.0/doc/latex/structTree.tex ViennaRNA-2.5.0/doc/latex/group__grammar.md5 ViennaRNA-2.5.0/doc/latex/group__eval.tex ViennaRNA-2.5.0/doc/latex/part__func__co_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/group__mfe__global.tex ViennaRNA-2.5.0/doc/latex/string__utils_8h__incl.md5 ViennaRNA-2.5.0/doc/latex/group__eval__loops__ext.md5 ViennaRNA-2.5.0/doc/latex/file__formats__msa_8h__incl.pdf ViennaRNA-2.5.0/doc/latex/structvrna__sc__s__coll__graph.md5 ViennaRNA-2.5.0/doc/latex/paths_8h_source.tex ViennaRNA-2.5.0/doc/latex/layouts_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/decomp_ext_up.eps ViennaRNA-2.5.0/doc/latex/ribo_8h.tex ViennaRNA-2.5.0/doc/latex/wrap__dlib_8h_source.tex ViennaRNA-2.5.0/doc/latex/PS__dot_8h_source.tex ViennaRNA-2.5.0/doc/latex/unstructured__domains_8h__dep__incl.pdf ViennaRNA-2.5.0/doc/latex/md_CONTRIBUTING.tex ViennaRNA-2.5.0/doc/latex/external_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/latex/group__combinatorics__utils.tex ViennaRNA-2.5.0/doc/latex/structvrna__structured__domains__s.tex ViennaRNA-2.5.0/doc/html/ ViennaRNA-2.5.0/doc/html/plot__aln_8h__incl.svg ViennaRNA-2.5.0/doc/html/plot__layouts_8h__incl.map ViennaRNA-2.5.0/doc/html/structvrna__sc__bp__storage__t.html ViennaRNA-2.5.0/doc/html/group__domains__struc.js ViennaRNA-2.5.0/doc/html/dir_8a4ca9b4a73205797ab566a10a6011af_dep.svg ViennaRNA-2.5.0/doc/html/soft_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/group__eval.svg ViennaRNA-2.5.0/doc/html/structswString.html ViennaRNA-2.5.0/doc/html/fold__compound_8h__incl.md5 ViennaRNA-2.5.0/doc/html/walk_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/form_65.png ViennaRNA-2.5.0/doc/html/group__dp__matrices.md5 ViennaRNA-2.5.0/doc/html/group__kl__neighborhood__stochbt.html ViennaRNA-2.5.0/doc/html/equilibrium__probs_8h.js ViennaRNA-2.5.0/doc/html/heat__capacity_8h__incl.map ViennaRNA-2.5.0/doc/html/dir_e78bc76dd94a8744fef38d57611bd23c.html ViennaRNA-2.5.0/doc/html/dp__matrices_8h__incl.svg ViennaRNA-2.5.0/doc/html/group__part__func__window_org.svg ViennaRNA-2.5.0/doc/html/utils_2units_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/structured__domains_8h_source.html ViennaRNA-2.5.0/doc/html/group__struct__utils__plist.md5 ViennaRNA-2.5.0/doc/html/1_88_84__epars_8h.html ViennaRNA-2.5.0/doc/html/files.html ViennaRNA-2.5.0/doc/html/cofold_8h__incl.map ViennaRNA-2.5.0/doc/html/RNApuzzler_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/structvrna__exp__param__s__coll__graph.map ViennaRNA-2.5.0/doc/html/utils_2alignments_8h_source.html ViennaRNA-2.5.0/doc/html/group__subopt__stochbt_org.svg ViennaRNA-2.5.0/doc/html/form_153.png ViennaRNA-2.5.0/doc/html/globals_b.html ViennaRNA-2.5.0/doc/html/loop__energies_8h.html ViennaRNA-2.5.0/doc/html/globals_defs_c.html ViennaRNA-2.5.0/doc/html/eval_8h_source.html ViennaRNA-2.5.0/doc/html/centroid_8h__incl.md5 ViennaRNA-2.5.0/doc/html/group__thermodynamics.html ViennaRNA-2.5.0/doc/html/paths_8h__incl.svg ViennaRNA-2.5.0/doc/html/layouts_8h__incl.md5 ViennaRNA-2.5.0/doc/html/2Dfold_8h.html ViennaRNA-2.5.0/doc/html/globals_v.html ViennaRNA-2.5.0/doc/html/dir_e78bc76dd94a8744fef38d57611bd23c_dep.svg ViennaRNA-2.5.0/doc/html/group__command__files.map ViennaRNA-2.5.0/doc/html/folderopen.png ViennaRNA-2.5.0/doc/html/io_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/2Dpfold_8h__incl.svg ViennaRNA-2.5.0/doc/html/globals_k.html ViennaRNA-2.5.0/doc/html/form_106.png ViennaRNA-2.5.0/doc/html/group__mfe.map ViennaRNA-2.5.0/doc/html/group__annotation__utils.html ViennaRNA-2.5.0/doc/html/form_2.png ViennaRNA-2.5.0/doc/html/ligand_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/plotting_2structures_8h__incl.map ViennaRNA-2.5.0/doc/html/group__SHAPE__reactivities.md5 ViennaRNA-2.5.0/doc/html/dir_000009_000011.html ViennaRNA-2.5.0/doc/html/globals_x.html ViennaRNA-2.5.0/doc/html/constraints__hard_8h.html ViennaRNA-2.5.0/doc/html/utils_2alignments_8h__incl.md5 ViennaRNA-2.5.0/doc/html/group__eval__loops__ext.html ViennaRNA-2.5.0/doc/html/layouts_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/group__file__formats__msa.map ViennaRNA-2.5.0/doc/html/dp__matrices_8h__dep__incl_org.svg ViennaRNA-2.5.0/doc/html/globals_f.html ViennaRNA-2.5.0/doc/html/group__kl__neighborhood__pf.html ViennaRNA-2.5.0/doc/html/dir_1ddf03e95848b6488d60454f7a385ded.js ViennaRNA-2.5.0/doc/html/globals_defs_x.html ViennaRNA-2.5.0/doc/html/landscape_2neighbor_8h__incl.svg ViennaRNA-2.5.0/doc/html/navtreeindex12.js ViennaRNA-2.5.0/doc/html/group__kl__neighborhood.svg ViennaRNA-2.5.0/doc/html/globals_defs_s.html ViennaRNA-2.5.0/doc/html/strings_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/constraints__ligand_8h__incl.svg ViennaRNA-2.5.0/doc/html/layouts_8h.js ViennaRNA-2.5.0/doc/html/sequence_8h__dep__incl_org.svg ViennaRNA-2.5.0/doc/html/paths_8h.html ViennaRNA-2.5.0/doc/html/PKplex_8h_source.html ViennaRNA-2.5.0/doc/html/1_88_84__intloops_8h.html ViennaRNA-2.5.0/doc/html/eval_8h.js ViennaRNA-2.5.0/doc/html/hard_8h__incl.svg ViennaRNA-2.5.0/doc/html/plotting_2utils_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/layouts_8h__incl.map ViennaRNA-2.5.0/doc/html/model_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/form_113.png ViennaRNA-2.5.0/doc/html/string__utils_8h__incl.map ViennaRNA-2.5.0/doc/html/external_8h__incl.svg ViennaRNA-2.5.0/doc/html/form_34.png ViennaRNA-2.5.0/doc/html/hard_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/constants_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/structvrna__fc__s__coll__graph.map ViennaRNA-2.5.0/doc/html/io_2file__formats__msa_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/datastructures_2char__stream_8h__incl.map ViennaRNA-2.5.0/doc/html/folding_grammar.html ViennaRNA-2.5.0/doc/html/group__kl__neighborhood.map ViennaRNA-2.5.0/doc/html/group__plotting__utils__deprecated.md5 ViennaRNA-2.5.0/doc/html/group__neighbors.html ViennaRNA-2.5.0/doc/html/hairpin_8h.html ViennaRNA-2.5.0/doc/html/form_107.png ViennaRNA-2.5.0/doc/html/2Dfold_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/interior__loops_8h_source.html ViennaRNA-2.5.0/doc/html/form_58.png ViennaRNA-2.5.0/doc/html/dir_54da8e06181df970e10d68c1aa7bbb33.js ViennaRNA-2.5.0/doc/html/landscape_2neighbor_8h_source.html ViennaRNA-2.5.0/doc/html/group__domains__up.md5 ViennaRNA-2.5.0/doc/html/group__struct__utils__plist.html ViennaRNA-2.5.0/doc/html/form_24.png ViennaRNA-2.5.0/doc/html/constraints_2basic_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/dir_1ca6f3a46323f79e1934000abf5d4efb.html ViennaRNA-2.5.0/doc/html/soft_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/navtreedata.js ViennaRNA-2.5.0/doc/html/internal_8h__incl.map ViennaRNA-2.5.0/doc/html/functions_vars_g.html ViennaRNA-2.5.0/doc/html/structure_motifs.html ViennaRNA-2.5.0/doc/html/structured__domains_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/utils_2alignments_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/recursions.png ViennaRNA-2.5.0/doc/html/dir_000009_000004.html ViennaRNA-2.5.0/doc/html/hairpin_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/concentrations_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/group__mfe__window__deprecated.js ViennaRNA-2.5.0/doc/html/fold__vars_8h__incl.map ViennaRNA-2.5.0/doc/html/utils_2units_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/ligand_8h__incl.svg ViennaRNA-2.5.0/doc/html/all_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/group__file__utils.map ViennaRNA-2.5.0/doc/html/plotting_2structures_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/group__kl__neighborhood__stochbt.md5 ViennaRNA-2.5.0/doc/html/group__domains.map ViennaRNA-2.5.0/doc/html/group__fold__compound.svg ViennaRNA-2.5.0/doc/html/equilibrium__probs_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/sequence_8h.js ViennaRNA-2.5.0/doc/html/utils_8h.html ViennaRNA-2.5.0/doc/html/move_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/dir_1ca6f3a46323f79e1934000abf5d4efb_dep.map ViennaRNA-2.5.0/doc/html/group__struct__utils__abstract__shapes.html ViennaRNA-2.5.0/doc/html/dir_3d74ce004720553e7871f65d12e07ff9_dep.map ViennaRNA-2.5.0/doc/html/hard_8h_source.html ViennaRNA-2.5.0/doc/html/part__func__up_8h.js ViennaRNA-2.5.0/doc/html/file__formats__msa_8h.html ViennaRNA-2.5.0/doc/html/perturbation__fold_8h.js ViennaRNA-2.5.0/doc/html/dir_000006_000004.html ViennaRNA-2.5.0/doc/html/group__struct__utils__deprecated.md5 ViennaRNA-2.5.0/doc/html/interior__loops_8h__incl.md5 ViennaRNA-2.5.0/doc/html/plex_8h_source.html ViennaRNA-2.5.0/doc/html/file__formats__msa_8h__incl.map ViennaRNA-2.5.0/doc/html/params_8h_source.html ViennaRNA-2.5.0/doc/html/form_6.png ViennaRNA-2.5.0/doc/html/constraints__SHAPE_8h__incl.svg ViennaRNA-2.5.0/doc/html/classes.html ViennaRNA-2.5.0/doc/html/navtreeindex6.js ViennaRNA-2.5.0/doc/html/functions_vars_t.html ViennaRNA-2.5.0/doc/html/structured__domains_8h.js ViennaRNA-2.5.0/doc/html/dir_8a4ca9b4a73205797ab566a10a6011af_dep.map ViennaRNA-2.5.0/doc/html/treedist_8h__incl.map ViennaRNA-2.5.0/doc/html/landscape_2walk_8h_source.html ViennaRNA-2.5.0/doc/html/params_2basic_8h.html ViennaRNA-2.5.0/doc/html/landscape_2walk_8h__incl.md5 ViennaRNA-2.5.0/doc/html/structvrna__path__s__coll__graph.svg ViennaRNA-2.5.0/doc/html/group__landscape.md5 ViennaRNA-2.5.0/doc/html/form_94.png ViennaRNA-2.5.0/doc/html/form_138.png ViennaRNA-2.5.0/doc/html/part__func__co_8h_source.html ViennaRNA-2.5.0/doc/html/functions_vars_d.html ViennaRNA-2.5.0/doc/html/group__subopt__stochbt.js ViennaRNA-2.5.0/doc/html/group__utils.js ViennaRNA-2.5.0/doc/html/plot__aln_8h.html ViennaRNA-2.5.0/doc/html/external_8h__incl.md5 ViennaRNA-2.5.0/doc/html/multibranch_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/dir_8b3d6293463b6781f7bf8859fc72e182.html ViennaRNA-2.5.0/doc/html/Lfold_8h__incl.svg ViennaRNA-2.5.0/doc/html/globals_defs.js ViennaRNA-2.5.0/doc/html/form_130.png ViennaRNA-2.5.0/doc/html/loop__energies_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/group__part__func__window__deprecated.html ViennaRNA-2.5.0/doc/html/mfe_8h__incl.map ViennaRNA-2.5.0/doc/html/structvrna__sc__motif__s.html ViennaRNA-2.5.0/doc/html/group__class__fold.map ViennaRNA-2.5.0/doc/html/dir_94a42affd43e91f8a4e9ff1a4c7599c5_dep.svg ViennaRNA-2.5.0/doc/html/group__eval__loops__hp.svg ViennaRNA-2.5.0/doc/html/energy__par_8h__incl.md5 ViennaRNA-2.5.0/doc/html/pk__plex_8h.html ViennaRNA-2.5.0/doc/html/convert__epars_8h__incl.map ViennaRNA-2.5.0/doc/html/group__plotting__utils__deprecated.map ViennaRNA-2.5.0/doc/html/group__subopt__stochbt__deprecated.map ViennaRNA-2.5.0/doc/html/form_184.png ViennaRNA-2.5.0/doc/html/group__buffer__utils.js ViennaRNA-2.5.0/doc/html/form_31.png ViennaRNA-2.5.0/doc/html/structTwoDpfold__vars__coll__graph.md5 ViennaRNA-2.5.0/doc/html/group__pseudoknots.md5 ViennaRNA-2.5.0/doc/html/strings_8h__incl.md5 ViennaRNA-2.5.0/doc/html/form_40.png ViennaRNA-2.5.0/doc/html/commands_8h.html ViennaRNA-2.5.0/doc/html/form_0.png ViennaRNA-2.5.0/doc/html/getting_started.js ViennaRNA-2.5.0/doc/html/PS__dot_8h__incl.map ViennaRNA-2.5.0/doc/html/utils_2basic_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/dir_e78bc76dd94a8744fef38d57611bd23c_dep.map ViennaRNA-2.5.0/doc/html/treedist_8h__incl.svg ViennaRNA-2.5.0/doc/html/group__dos.svg ViennaRNA-2.5.0/doc/html/structLST__BUCKET__coll__graph.map ViennaRNA-2.5.0/doc/html/exterior__loops_8h__incl.map ViennaRNA-2.5.0/doc/html/functions_vars.html ViennaRNA-2.5.0/doc/html/hairpin_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/move_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/group__mfe__global.svg ViennaRNA-2.5.0/doc/html/form_125.png ViennaRNA-2.5.0/doc/html/structvrna__param__s__coll__graph.map ViennaRNA-2.5.0/doc/html/Lfold_8h.html ViennaRNA-2.5.0/doc/html/params_2basic_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/strings_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/group__alphabet__utils.js ViennaRNA-2.5.0/doc/html/dir_ece6de16e10c3ab1bafd819fa99af76e.js ViennaRNA-2.5.0/doc/html/landscape_2neighbor_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/internal_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/perturbation__fold_8h.html ViennaRNA-2.5.0/doc/html/group__heap__utils.map ViennaRNA-2.5.0/doc/html/layouts_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/group__mfe.md5 ViennaRNA-2.5.0/doc/html/form_81.png ViennaRNA-2.5.0/doc/html/group__plot__layout__utils.js ViennaRNA-2.5.0/doc/html/group__eval__loops.md5 ViennaRNA-2.5.0/doc/html/plotting_2naview_8h.html ViennaRNA-2.5.0/doc/html/form_172.png ViennaRNA-2.5.0/doc/html/gquad_8h__incl.map ViennaRNA-2.5.0/doc/html/form_152.png ViennaRNA-2.5.0/doc/html/group__struct__utils.svg ViennaRNA-2.5.0/doc/html/group__domains.svg ViennaRNA-2.5.0/doc/html/perturbation__fold_8h_source.html ViennaRNA-2.5.0/doc/html/internal_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/navtreeindex1.js ViennaRNA-2.5.0/doc/html/globals_func_g.html ViennaRNA-2.5.0/doc/html/functions_i.html ViennaRNA-2.5.0/doc/html/globals_enum.html ViennaRNA-2.5.0/doc/html/group__file__utils.html ViennaRNA-2.5.0/doc/html/form_115.png ViennaRNA-2.5.0/doc/html/params_8h__incl.map ViennaRNA-2.5.0/doc/html/examples_perl5.html ViennaRNA-2.5.0/doc/html/group__units.html ViennaRNA-2.5.0/doc/html/globals_g.html ViennaRNA-2.5.0/doc/html/group__dos.map ViennaRNA-2.5.0/doc/html/group__pseudoknots.js ViennaRNA-2.5.0/doc/html/group__energy__parameters_structvrna__param__s.js ViennaRNA-2.5.0/doc/html/dp__matrices_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/concentrations_8h__incl.map ViennaRNA-2.5.0/doc/html/energy__par_8h_source.html ViennaRNA-2.5.0/doc/html/group__string__utils.map ViennaRNA-2.5.0/doc/html/group__paths__walk.js ViennaRNA-2.5.0/doc/html/io_8h_source.html ViennaRNA-2.5.0/doc/html/group__grammar.js ViennaRNA-2.5.0/doc/html/suboptimal_structures.html ViennaRNA-2.5.0/doc/html/functions_vars_n.html ViennaRNA-2.5.0/doc/html/group__kl__neighborhood__stochbt.svg ViennaRNA-2.5.0/doc/html/interior__loops_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/form_25.png ViennaRNA-2.5.0/doc/html/group__gquads.svg ViennaRNA-2.5.0/doc/html/group__mea__fold.svg ViennaRNA-2.5.0/doc/html/group__mfe__window.js ViennaRNA-2.5.0/doc/html/concentrations_8h.html ViennaRNA-2.5.0/doc/html/paths_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/dir_000008_000004.html ViennaRNA-2.5.0/doc/html/group__neighbors.js ViennaRNA-2.5.0/doc/html/utils_2units_8h.js ViennaRNA-2.5.0/doc/html/io_2utils_8h__incl.svg ViennaRNA-2.5.0/doc/html/neighbor_8h__incl.md5 ViennaRNA-2.5.0/doc/html/dir_e78bc76dd94a8744fef38d57611bd23c_dep.md5 ViennaRNA-2.5.0/doc/html/units_8h__incl.md5 ViennaRNA-2.5.0/doc/html/secondary_structure_landscape.html ViennaRNA-2.5.0/doc/html/structTwoDpfold__vars.html ViennaRNA-2.5.0/doc/html/group__paired__modules.svg ViennaRNA-2.5.0/doc/html/structured__domains_8h__dep__incl_org.svg ViennaRNA-2.5.0/doc/html/group__paths__walk.svg ViennaRNA-2.5.0/doc/html/group__subopt__zuker.md5 ViennaRNA-2.5.0/doc/html/constraints_2basic_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/globals_func.js ViennaRNA-2.5.0/doc/html/group__struct__utils__abstract__shapes.svg ViennaRNA-2.5.0/doc/html/group__neighbors_structvrna__move__s.js ViennaRNA-2.5.0/doc/html/probabilities_8h.html ViennaRNA-2.5.0/doc/html/group__buffer__utils.svg ViennaRNA-2.5.0/doc/html/utils_2alignments_8h__incl.map ViennaRNA-2.5.0/doc/html/shift_move_intervals.svg ViennaRNA-2.5.0/doc/html/external_8h__incl.map ViennaRNA-2.5.0/doc/html/plotting_2naview_8h.js ViennaRNA-2.5.0/doc/html/utils_2basic_8h_source.html ViennaRNA-2.5.0/doc/html/group__pf__fold.js ViennaRNA-2.5.0/doc/html/plot__layouts_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/group__utils.html ViennaRNA-2.5.0/doc/html/splitbar.png ViennaRNA-2.5.0/doc/html/group__domains__struc.md5 ViennaRNA-2.5.0/doc/html/mfe_8h.js ViennaRNA-2.5.0/doc/html/plotting_2utils_8h__incl.md5 ViennaRNA-2.5.0/doc/html/group__struct__utils__metrics.md5 ViennaRNA-2.5.0/doc/html/group__mea__fold.js ViennaRNA-2.5.0/doc/html/functions_e.html ViennaRNA-2.5.0/doc/html/group__struct__utils__abstract__shapes.map ViennaRNA-2.5.0/doc/html/form_17.png ViennaRNA-2.5.0/doc/html/internal_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/tab_s.png ViennaRNA-2.5.0/doc/html/datastructures_2char__stream_8h.js ViennaRNA-2.5.0/doc/html/form_32.png ViennaRNA-2.5.0/doc/html/energy__const_8h__incl.md5 ViennaRNA-2.5.0/doc/html/doc.png ViennaRNA-2.5.0/doc/html/group__domains__up.js ViennaRNA-2.5.0/doc/html/group__constraints__ligand.svg ViennaRNA-2.5.0/doc/html/convert_8h_source.html ViennaRNA-2.5.0/doc/html/centroid_8h.html ViennaRNA-2.5.0/doc/html/sequence_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/form_49.png ViennaRNA-2.5.0/doc/html/concentrations_8h__incl.svg ViennaRNA-2.5.0/doc/html/io_2utils_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/gquad_8h_source.html ViennaRNA-2.5.0/doc/html/form_90.png ViennaRNA-2.5.0/doc/html/alphabet_8h.js ViennaRNA-2.5.0/doc/html/utils_2alignments_8h__incl.svg ViennaRNA-2.5.0/doc/html/group__subopt__and__representatives.svg ViennaRNA-2.5.0/doc/html/constraints__ligand_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/2Dfold_8h__incl.md5 ViennaRNA-2.5.0/doc/html/group__file__formats.js ViennaRNA-2.5.0/doc/html/landscape_2walk_8h__incl.svg ViennaRNA-2.5.0/doc/html/equilibrium__probs_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/form_16.png ViennaRNA-2.5.0/doc/html/form_126.png ViennaRNA-2.5.0/doc/html/wrap__dlib_8h_source.html ViennaRNA-2.5.0/doc/html/fold__compound_8h__incl.svg ViennaRNA-2.5.0/doc/html/RNAstruct_8h.js ViennaRNA-2.5.0/doc/html/navtree.js ViennaRNA-2.5.0/doc/html/group__eval__loops__ext.svg ViennaRNA-2.5.0/doc/html/intl21dH_8h_source.html ViennaRNA-2.5.0/doc/html/functions_b.html ViennaRNA-2.5.0/doc/html/move_8h.js ViennaRNA-2.5.0/doc/html/group__alignment__plots.map ViennaRNA-2.5.0/doc/html/structTwoDfold__vars__coll__graph_org.svg ViennaRNA-2.5.0/doc/html/form_93.png ViennaRNA-2.5.0/doc/html/mm_8h.js ViennaRNA-2.5.0/doc/html/group__dos.md5 ViennaRNA-2.5.0/doc/html/group__paths__deprecated.svg ViennaRNA-2.5.0/doc/html/datastructures_2basic_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/constraints_2basic_8h__incl.svg ViennaRNA-2.5.0/doc/html/group__eval__loops.map ViennaRNA-2.5.0/doc/html/findpath_8h__incl.map ViennaRNA-2.5.0/doc/html/form_129.png ViennaRNA-2.5.0/doc/html/utils_2structures_8h_source.html ViennaRNA-2.5.0/doc/html/dir_000008_000005.html ViennaRNA-2.5.0/doc/html/graph_legend.html ViennaRNA-2.5.0/doc/html/convert_8h.js ViennaRNA-2.5.0/doc/html/pair__mat_8h_source.html ViennaRNA-2.5.0/doc/html/datastructures_2char__stream_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/alifold_8h__incl.svg ViennaRNA-2.5.0/doc/html/globals_j.html ViennaRNA-2.5.0/doc/html/dir_8b3d6293463b6781f7bf8859fc72e182_dep.svg ViennaRNA-2.5.0/doc/html/plot__aln_8h__incl.map ViennaRNA-2.5.0/doc/html/utils_2units_8h.html ViennaRNA-2.5.0/doc/html/hairpin__loops_8h__incl.map ViennaRNA-2.5.0/doc/html/group__landscape.svg ViennaRNA-2.5.0/doc/html/units_8h__incl.svg ViennaRNA-2.5.0/doc/html/group__paths__deprecated.map ViennaRNA-2.5.0/doc/html/group__annotation__utils.svg ViennaRNA-2.5.0/doc/html/commands_8h__incl.md5 ViennaRNA-2.5.0/doc/html/group__grammar.svg ViennaRNA-2.5.0/doc/html/alphabet_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/structvrna__alignment__s__coll__graph.md5 ViennaRNA-2.5.0/doc/html/group__eval__loops__hp.md5 ViennaRNA-2.5.0/doc/html/group__alignment__plots.html ViennaRNA-2.5.0/doc/html/eval_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/part__func__co_8h__incl.md5 ViennaRNA-2.5.0/doc/html/form_69.png ViennaRNA-2.5.0/doc/html/alifold_8h.html ViennaRNA-2.5.0/doc/html/io.html ViennaRNA-2.5.0/doc/html/form_120.png ViennaRNA-2.5.0/doc/html/group__constraints.js ViennaRNA-2.5.0/doc/html/walk_8h__incl.md5 ViennaRNA-2.5.0/doc/html/form_68.png ViennaRNA-2.5.0/doc/html/multibranch_8h_source.html ViennaRNA-2.5.0/doc/html/all_8h_source.html ViennaRNA-2.5.0/doc/html/group__neighbors.map ViennaRNA-2.5.0/doc/html/form_45.png ViennaRNA-2.5.0/doc/html/file__formats_8h__incl.svg ViennaRNA-2.5.0/doc/html/alphabet_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/form_167.png ViennaRNA-2.5.0/doc/html/group__landscape.html ViennaRNA-2.5.0/doc/html/form_143.png ViennaRNA-2.5.0/doc/html/structure__utils_8h__incl.md5 ViennaRNA-2.5.0/doc/html/group__constraints.map ViennaRNA-2.5.0/doc/html/group__struct__utils__dot__bracket.js ViennaRNA-2.5.0/doc/html/group__eval__loops__ext.js ViennaRNA-2.5.0/doc/html/structvrna__subopt__sol__s.html ViennaRNA-2.5.0/doc/html/cofold_8h.html ViennaRNA-2.5.0/doc/html/constraints_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/structvrna__dotplot__auxdata__t__coll__graph.map ViennaRNA-2.5.0/doc/html/SHAPE_8h.html ViennaRNA-2.5.0/doc/html/group__plotting__utils.js ViennaRNA-2.5.0/doc/html/group__hard__constraints.svg ViennaRNA-2.5.0/doc/html/form_150.png ViennaRNA-2.5.0/doc/html/plot__utils_8h_source.html ViennaRNA-2.5.0/doc/html/centroid_8h__incl.map ViennaRNA-2.5.0/doc/html/boltzmann__sampling_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/open.png ViennaRNA-2.5.0/doc/html/group__file__formats__msa.md5 ViennaRNA-2.5.0/doc/html/group__part__func__global.map ViennaRNA-2.5.0/doc/html/folderclosed.png ViennaRNA-2.5.0/doc/html/group__plot__layout__utils.md5 ViennaRNA-2.5.0/doc/html/nav_f.png ViennaRNA-2.5.0/doc/html/group__kl__neighborhood__mfe.html ViennaRNA-2.5.0/doc/html/dist__vars_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/file__formats_8h__incl.md5 ViennaRNA-2.5.0/doc/html/doxygen.svg ViennaRNA-2.5.0/doc/html/loop_types.png ViennaRNA-2.5.0/doc/html/plot__aln_8h__incl.md5 ViennaRNA-2.5.0/doc/html/form_89.png ViennaRNA-2.5.0/doc/html/io_2file__formats__msa_8h.html ViennaRNA-2.5.0/doc/html/functions_w.html ViennaRNA-2.5.0/doc/html/group__mfe__global__deprecated.md5 ViennaRNA-2.5.0/doc/html/concentrations_8h__incl.md5 ViennaRNA-2.5.0/doc/html/utils_2units_8h_source.html ViennaRNA-2.5.0/doc/html/constraints__hard_8h_source.html ViennaRNA-2.5.0/doc/html/structvrna__structured__domains__s.html ViennaRNA-2.5.0/doc/html/group__kl__neighborhood__pf.md5 ViennaRNA-2.5.0/doc/html/group__eval__move.js ViennaRNA-2.5.0/doc/html/group__pseudoknots.html ViennaRNA-2.5.0/doc/html/functions_vars_w.html ViennaRNA-2.5.0/doc/html/group__dp__matrices.map ViennaRNA-2.5.0/doc/html/plotting_2alignments_8h.html ViennaRNA-2.5.0/doc/html/form_30.png ViennaRNA-2.5.0/doc/html/constraints_8h__incl.md5 ViennaRNA-2.5.0/doc/html/landscape_2walk_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/mfe__window_8h.html ViennaRNA-2.5.0/doc/html/form_177.png ViennaRNA-2.5.0/doc/html/group__data__structures.html ViennaRNA-2.5.0/doc/html/dir_1ca6f3a46323f79e1934000abf5d4efb_dep.md5 ViennaRNA-2.5.0/doc/html/mfe__window_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/neighbor_8h__incl.svg ViennaRNA-2.5.0/doc/html/form_162.png ViennaRNA-2.5.0/doc/html/1_88_84__intloops_8h_source.html ViennaRNA-2.5.0/doc/html/group__neighbors.md5 ViennaRNA-2.5.0/doc/html/group__eval__move.svg ViennaRNA-2.5.0/doc/html/group__probing__data.js ViennaRNA-2.5.0/doc/html/rna_structure_notations.html ViennaRNA-2.5.0/doc/html/energy__const_8h__incl.map ViennaRNA-2.5.0/doc/html/group__part__func__window.svg ViennaRNA-2.5.0/doc/html/group__combinatorics__utils.map ViennaRNA-2.5.0/doc/html/group__constraints__ligand.js ViennaRNA-2.5.0/doc/html/fold__compound_8h.html ViennaRNA-2.5.0/doc/html/form_38.png ViennaRNA-2.5.0/doc/html/dir_8a4ca9b4a73205797ab566a10a6011af.html ViennaRNA-2.5.0/doc/html/form_21.png ViennaRNA-2.5.0/doc/html/alphabet_8h__incl.map ViennaRNA-2.5.0/doc/html/globals_defs_i.html ViennaRNA-2.5.0/doc/html/form_27.png ViennaRNA-2.5.0/doc/html/hard_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/treedist_8h__incl.md5 ViennaRNA-2.5.0/doc/html/constraints_8h__incl.map ViennaRNA-2.5.0/doc/html/design.html ViennaRNA-2.5.0/doc/html/io_2utils_8h__incl.map ViennaRNA-2.5.0/doc/html/form_76.png ViennaRNA-2.5.0/doc/html/group__energy__parameters__rw.md5 ViennaRNA-2.5.0/doc/html/MEA_8h.js ViennaRNA-2.5.0/doc/html/group__plotting__utils.svg ViennaRNA-2.5.0/doc/html/data_structures.js ViennaRNA-2.5.0/doc/html/stringdist_8h__incl.map ViennaRNA-2.5.0/doc/html/soft_8h.js ViennaRNA-2.5.0/doc/html/boltzmann__sampling_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/form_169.png ViennaRNA-2.5.0/doc/html/ligands_up_callback.svg ViennaRNA-2.5.0/doc/html/group__domains.js ViennaRNA-2.5.0/doc/html/plot__utils_8h.html ViennaRNA-2.5.0/doc/html/form_80.png ViennaRNA-2.5.0/doc/html/group__ligand__binding.svg ViennaRNA-2.5.0/doc/html/group__SHAPE__reactivities.html ViennaRNA-2.5.0/doc/html/form_174.png ViennaRNA-2.5.0/doc/html/decomp_ml_ml.svg ViennaRNA-2.5.0/doc/html/group__pf__cofold.js ViennaRNA-2.5.0/doc/html/part__func__co_8h__incl.svg ViennaRNA-2.5.0/doc/html/io_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/constraints__SHAPE_8h_source.html ViennaRNA-2.5.0/doc/html/group__kl__neighborhood__mfe.js ViennaRNA-2.5.0/doc/html/dir_e68e8157741866f444e17edd764ebbae.html ViennaRNA-2.5.0/doc/html/group__eval__loops__int.svg ViennaRNA-2.5.0/doc/html/heat__capacity_8h.html ViennaRNA-2.5.0/doc/html/group__utils_org.svg ViennaRNA-2.5.0/doc/html/newAPI.html ViennaRNA-2.5.0/doc/html/group__plotting__utils__deprecated.svg ViennaRNA-2.5.0/doc/html/form_12.png ViennaRNA-2.5.0/doc/html/multibranch__loops_8h__incl.svg ViennaRNA-2.5.0/doc/html/group__struct__utils__plist_structvrna__elem__prob__s.js ViennaRNA-2.5.0/doc/html/stringdist_8h.html ViennaRNA-2.5.0/doc/html/navtreeindex8.js ViennaRNA-2.5.0/doc/html/io_2file__formats__msa_8h__incl.map ViennaRNA-2.5.0/doc/html/eval_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/stringdist_8h.js ViennaRNA-2.5.0/doc/html/group__energy__parameters.map ViennaRNA-2.5.0/doc/html/svm__utils_8h__incl.map ViennaRNA-2.5.0/doc/html/gquad_8h__incl.md5 ViennaRNA-2.5.0/doc/html/io_2file__formats_8h__incl.map ViennaRNA-2.5.0/doc/html/commands_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/subopt_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/group__mfe__window__deprecated.md5 ViennaRNA-2.5.0/doc/html/group__subopt__zuker.html ViennaRNA-2.5.0/doc/html/file_formats.html ViennaRNA-2.5.0/doc/html/examples_python.html ViennaRNA-2.5.0/doc/html/char__stream_8h__incl.md5 ViennaRNA-2.5.0/doc/html/io_2utils_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/decomp_ext_stem_ext.svg ViennaRNA-2.5.0/doc/html/structvrna__path__s__coll__graph.map ViennaRNA-2.5.0/doc/html/part__func__window_8h__incl.map ViennaRNA-2.5.0/doc/html/utils_2structures_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/subopt_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/RNApuzzler_8h_source.html ViennaRNA-2.5.0/doc/html/intl11_8h_source.html ViennaRNA-2.5.0/doc/html/internal_8h__incl.md5 ViennaRNA-2.5.0/doc/html/LPfold_8h.js ViennaRNA-2.5.0/doc/html/group__paths.html ViennaRNA-2.5.0/doc/html/plotting_2utils_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/commands_8h__incl.svg ViennaRNA-2.5.0/doc/html/group__paths__walk.map ViennaRNA-2.5.0/doc/html/structvrna__dotplot__auxdata__t__coll__graph.md5 ViennaRNA-2.5.0/doc/html/group__paths__deprecated.js ViennaRNA-2.5.0/doc/html/mfe_8h_source.html ViennaRNA-2.5.0/doc/html/group__pf__cofold.html ViennaRNA-2.5.0/doc/html/params_8h__incl.svg ViennaRNA-2.5.0/doc/html/constraints__ligand_8h.html ViennaRNA-2.5.0/doc/html/navtreeindex0.js ViennaRNA-2.5.0/doc/html/constraints_2basic_8h__incl.md5 ViennaRNA-2.5.0/doc/html/group__pseudoknots.svg ViennaRNA-2.5.0/doc/html/group__ligand__binding.js ViennaRNA-2.5.0/doc/html/group__model__details.html ViennaRNA-2.5.0/doc/html/group__string__utils.html ViennaRNA-2.5.0/doc/html/ribo_8h.js ViennaRNA-2.5.0/doc/html/group__struct__utils.md5 ViennaRNA-2.5.0/doc/html/part__func__co_8h.html ViennaRNA-2.5.0/doc/html/plot__structure_8h__incl.md5 ViennaRNA-2.5.0/doc/html/landscape_2neighbor_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/group__struct__utils__abstract__shapes.md5 ViennaRNA-2.5.0/doc/html/heap_8h.js ViennaRNA-2.5.0/doc/html/heat__capacity_8h_source.html ViennaRNA-2.5.0/doc/html/group__mfe__backtracking.html ViennaRNA-2.5.0/doc/html/constraints__hard_8h__incl.map ViennaRNA-2.5.0/doc/html/exterior__loops_8h_source.html ViennaRNA-2.5.0/doc/html/PS__dot_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/structTwoDpfold__vars__coll__graph_org.svg ViennaRNA-2.5.0/doc/html/globals_eval.html ViennaRNA-2.5.0/doc/html/form_160.png ViennaRNA-2.5.0/doc/html/decomp_ext_up.svg ViennaRNA-2.5.0/doc/html/io_2file__formats_8h_source.html ViennaRNA-2.5.0/doc/html/MEA_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/functions_vars_o.html ViennaRNA-2.5.0/doc/html/params_2basic_8h__dep__incl_org.svg ViennaRNA-2.5.0/doc/html/snoop_8h_source.html ViennaRNA-2.5.0/doc/html/subopt_8h.js ViennaRNA-2.5.0/doc/html/grammar_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/group__eval__loops__hp.js ViennaRNA-2.5.0/doc/html/form_122.png ViennaRNA-2.5.0/doc/html/globals_l.html ViennaRNA-2.5.0/doc/html/part__func__window_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/functions_vars_h.html ViennaRNA-2.5.0/doc/html/globals_defs_b.html ViennaRNA-2.5.0/doc/html/plot__utils_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/group__alignment__plots.js ViennaRNA-2.5.0/doc/html/group__energy__parameters__rw.map ViennaRNA-2.5.0/doc/html/constraints_2basic_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/decomp_ml_up.svg ViennaRNA-2.5.0/doc/html/utils_2structures_8h__incl.map ViennaRNA-2.5.0/doc/html/group__kl__neighborhood.js ViennaRNA-2.5.0/doc/html/group__thermodynamics.js ViennaRNA-2.5.0/doc/html/navtree.css ViennaRNA-2.5.0/doc/html/group__message__utils.html ViennaRNA-2.5.0/doc/html/group__eval__loops__ext.map ViennaRNA-2.5.0/doc/html/modules.html ViennaRNA-2.5.0/doc/html/group__kl__neighborhood__pf.map ViennaRNA-2.5.0/doc/html/group__constraints__ligand.html ViennaRNA-2.5.0/doc/html/internal_8h.js ViennaRNA-2.5.0/doc/html/structTwoDfold__vars__coll__graph.md5 ViennaRNA-2.5.0/doc/html/deprecated.html ViennaRNA-2.5.0/doc/html/exterior__loops_8h__incl.svg ViennaRNA-2.5.0/doc/html/mm_8h__incl.md5 ViennaRNA-2.5.0/doc/html/group__gquads.md5 ViennaRNA-2.5.0/doc/html/landscape_2walk_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/pk__plex_8h__incl.svg ViennaRNA-2.5.0/doc/html/utils_2structures_8h__incl.svg ViennaRNA-2.5.0/doc/html/structvrna__move__s__coll__graph.svg ViennaRNA-2.5.0/doc/html/group__aln__utils__deprecated.js ViennaRNA-2.5.0/doc/html/hard_8h.html ViennaRNA-2.5.0/doc/html/io_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/group__part__func__global__deprecated.svg ViennaRNA-2.5.0/doc/html/group__domains__up.map ViennaRNA-2.5.0/doc/html/form_159.png ViennaRNA-2.5.0/doc/html/part__func_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/cofold_8h__incl.md5 ViennaRNA-2.5.0/doc/html/group__mfe__global.map ViennaRNA-2.5.0/doc/html/probabilities_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/file__formats__msa_8h__incl.md5 ViennaRNA-2.5.0/doc/html/svm__utils_8h.html ViennaRNA-2.5.0/doc/html/functions_p.html ViennaRNA-2.5.0/doc/html/group__mfe.html ViennaRNA-2.5.0/doc/html/form_182.png ViennaRNA-2.5.0/doc/html/dir_511ee2b14d6879b7ada858ff02a7ab24.html ViennaRNA-2.5.0/doc/html/unstructured__domains_8h__dep__incl_org.svg ViennaRNA-2.5.0/doc/html/structured__domains_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/group__aln__utils__deprecated.md5 ViennaRNA-2.5.0/doc/html/constraints_8h__incl.svg ViennaRNA-2.5.0/doc/html/intl22dH_8h_source.html ViennaRNA-2.5.0/doc/html/ribo_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/utils_2structures_8h__incl.md5 ViennaRNA-2.5.0/doc/html/form_78.png ViennaRNA-2.5.0/doc/html/tabs.css ViennaRNA-2.5.0/doc/html/file__utils_8h.html ViennaRNA-2.5.0/doc/html/combinatorics_8h__incl.md5 ViennaRNA-2.5.0/doc/html/stringdist_8h__incl.md5 ViennaRNA-2.5.0/doc/html/group__eval.map ViennaRNA-2.5.0/doc/html/params_2basic_8h__incl.map ViennaRNA-2.5.0/doc/html/group__eval__loops.html ViennaRNA-2.5.0/doc/html/datastructures_2char__stream_8h_source.html ViennaRNA-2.5.0/doc/html/group__pf__fold.html ViennaRNA-2.5.0/doc/html/grammar_8h.html ViennaRNA-2.5.0/doc/html/group__grammar_structvrna__gr__aux__s.js ViennaRNA-2.5.0/doc/html/2Dpfold_8h.html ViennaRNA-2.5.0/doc/html/group__buffer__utils.md5 ViennaRNA-2.5.0/doc/html/probabilities_8h.js ViennaRNA-2.5.0/doc/html/dir_1ca6f3a46323f79e1934000abf5d4efb.js ViennaRNA-2.5.0/doc/html/plotting_2utils_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/group__eval.js ViennaRNA-2.5.0/doc/html/bc_s.png ViennaRNA-2.5.0/doc/html/tab_h.png ViennaRNA-2.5.0/doc/html/group__heap__utils.js ViennaRNA-2.5.0/doc/html/group__mfe__global__deprecated.js ViennaRNA-2.5.0/doc/html/plot__structure_8h__incl.svg ViennaRNA-2.5.0/doc/html/utils_2units_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/group__struct__utils__pair__table.js ViennaRNA-2.5.0/doc/html/datastructures_2stream__output_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/group__kl__neighborhood__pf.js ViennaRNA-2.5.0/doc/html/plotting_2naview_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/constraints__hard_8h__incl.svg ViennaRNA-2.5.0/doc/html/form_82.png ViennaRNA-2.5.0/doc/html/fold_compound_container.html ViennaRNA-2.5.0/doc/html/classified_dp.html ViennaRNA-2.5.0/doc/html/external_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/form_110.png ViennaRNA-2.5.0/doc/html/plot__utils_8h__incl.map ViennaRNA-2.5.0/doc/html/form_61.png ViennaRNA-2.5.0/doc/html/group__subopt__stochbt.html ViennaRNA-2.5.0/doc/html/walk_8h.html ViennaRNA-2.5.0/doc/html/mfe__window_8h_source.html ViennaRNA-2.5.0/doc/html/move_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/datastructures_2basic_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/group__kl__neighborhood__mfe.md5 ViennaRNA-2.5.0/doc/html/form_158.png ViennaRNA-2.5.0/doc/html/centroid_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/group__probing__data.svg ViennaRNA-2.5.0/doc/html/params_2basic_8h__incl.md5 ViennaRNA-2.5.0/doc/html/part__func__co_8h.js ViennaRNA-2.5.0/doc/html/part__func_8h__incl.svg ViennaRNA-2.5.0/doc/html/hard_8h__dep__incl_org.svg ViennaRNA-2.5.0/doc/html/paths_8h__incl.map ViennaRNA-2.5.0/doc/html/group__ligand__binding.html ViennaRNA-2.5.0/doc/html/convert__epars_8h__incl.svg ViennaRNA-2.5.0/doc/html/functions_d.html ViennaRNA-2.5.0/doc/html/citelist.html ViennaRNA-2.5.0/doc/html/plotting_2structures_8h__incl.svg ViennaRNA-2.5.0/doc/html/structvrna__path__s__coll__graph.md5 ViennaRNA-2.5.0/doc/html/plotting_2alignments_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/form_156.png ViennaRNA-2.5.0/doc/html/group__paths__direct.js ViennaRNA-2.5.0/doc/html/dynsections.js ViennaRNA-2.5.0/doc/html/plotting_2alignments_8h_source.html ViennaRNA-2.5.0/doc/html/constraints__soft_8h_source.html ViennaRNA-2.5.0/doc/html/globals_func_r.html ViennaRNA-2.5.0/doc/html/plotting_2utils_8h.html ViennaRNA-2.5.0/doc/html/form_116.png ViennaRNA-2.5.0/doc/html/group__energy__parameters.svg ViennaRNA-2.5.0/doc/html/group__paired__modules.js ViennaRNA-2.5.0/doc/html/group__mfe__global__deprecated.svg ViennaRNA-2.5.0/doc/html/dir_54da8e06181df970e10d68c1aa7bbb33.html ViennaRNA-2.5.0/doc/html/globals_defs_k.html ViennaRNA-2.5.0/doc/html/globals_defs_e.html ViennaRNA-2.5.0/doc/html/convert_8h.html ViennaRNA-2.5.0/doc/html/internal_8h__incl.svg ViennaRNA-2.5.0/doc/html/form_18.png ViennaRNA-2.5.0/doc/html/group__model__details.svg ViennaRNA-2.5.0/doc/html/form_148.png ViennaRNA-2.5.0/doc/html/form_142.png ViennaRNA-2.5.0/doc/html/SHAPE_8h__incl.md5 ViennaRNA-2.5.0/doc/html/group__message__utils.md5 ViennaRNA-2.5.0/doc/html/heat__capacity_8h.js ViennaRNA-2.5.0/doc/html/dir_8a4ca9b4a73205797ab566a10a6011af.js ViennaRNA-2.5.0/doc/html/group__fold__compound.map ViennaRNA-2.5.0/doc/html/eval_8h.html ViennaRNA-2.5.0/doc/html/form_144.png ViennaRNA-2.5.0/doc/html/group__struct__utils__tree.svg ViennaRNA-2.5.0/doc/html/dir_ece6de16e10c3ab1bafd819fa99af76e.html ViennaRNA-2.5.0/doc/html/perturbation__fold_8h__incl.map ViennaRNA-2.5.0/doc/html/SHAPE_8h.js ViennaRNA-2.5.0/doc/html/cofold_8h__incl.svg ViennaRNA-2.5.0/doc/html/mfe_algorithm.html ViennaRNA-2.5.0/doc/html/ribo_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/group__pf__fold.svg ViennaRNA-2.5.0/doc/html/dir_1ddf03e95848b6488d60454f7a385ded_dep.map ViennaRNA-2.5.0/doc/html/datastructures_2basic_8h__incl.map ViennaRNA-2.5.0/doc/html/energy__par_8h__incl.map ViennaRNA-2.5.0/doc/html/functions_vars_p.html ViennaRNA-2.5.0/doc/html/group__probing__data.map ViennaRNA-2.5.0/doc/html/part__func_8h__incl.map ViennaRNA-2.5.0/doc/html/model_8h_source.html ViennaRNA-2.5.0/doc/html/structure_probing_data.html ViennaRNA-2.5.0/doc/html/group__centroid__fold.md5 ViennaRNA-2.5.0/doc/html/form_98.png ViennaRNA-2.5.0/doc/html/group__neighbors.svg ViennaRNA-2.5.0/doc/html/plotting_2utils_8h_source.html ViennaRNA-2.5.0/doc/html/fold__vars_8h__incl.svg ViennaRNA-2.5.0/doc/html/hard_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/strings_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/io_2utils_8h__incl.md5 ViennaRNA-2.5.0/doc/html/2Dpfold_8h__incl.md5 ViennaRNA-2.5.0/doc/html/probabilities_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/group__part__func__global__deprecated.md5 ViennaRNA-2.5.0/doc/html/utils_2basic_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/group__soft__constraints.map ViennaRNA-2.5.0/doc/html/form_4.png ViennaRNA-2.5.0/doc/html/group__struct__utils__metrics.svg ViennaRNA-2.5.0/doc/html/group__kl__neighborhood__mfe.svg ViennaRNA-2.5.0/doc/html/all_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/sync_off.png ViennaRNA-2.5.0/doc/html/datastructures_2char__stream_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/form_79.png ViennaRNA-2.5.0/doc/html/group__energy__parameters__convert.html ViennaRNA-2.5.0/doc/html/string__utils_8h_source.html ViennaRNA-2.5.0/doc/html/group__pseudoknots.map ViennaRNA-2.5.0/doc/html/group__alphabet__utils_structvrna__sequence__s.js ViennaRNA-2.5.0/doc/html/dir_8a4ca9b4a73205797ab566a10a6011af_dep.md5 ViennaRNA-2.5.0/doc/html/group__command__files.md5 ViennaRNA-2.5.0/doc/html/alphabet_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/globals_m.html ViennaRNA-2.5.0/doc/html/group__hard__constraints_structvrna__hc__up__s.js ViennaRNA-2.5.0/doc/html/group__centroid__fold.svg ViennaRNA-2.5.0/doc/html/heat__capacity_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/dir_8b3d6293463b6781f7bf8859fc72e182_dep.map ViennaRNA-2.5.0/doc/html/group__inverse__fold.js ViennaRNA-2.5.0/doc/html/structTwoDfold__vars__coll__graph.map ViennaRNA-2.5.0/doc/html/group__pseudoknots_structvrna__pk__plex__result__s.js ViennaRNA-2.5.0/doc/html/group__aln__utils.js ViennaRNA-2.5.0/doc/html/globals_vars.html ViennaRNA-2.5.0/doc/html/grammar_8h__incl.svg ViennaRNA-2.5.0/doc/html/globals_defs_f.html ViennaRNA-2.5.0/doc/html/group__plot__layout__utils.map ViennaRNA-2.5.0/doc/html/pk__plex_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/group__struct__utils__pair__table.html ViennaRNA-2.5.0/doc/html/centroid_8h_source.html ViennaRNA-2.5.0/doc/html/constraints__soft_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/group__struct__utils__wuss.map ViennaRNA-2.5.0/doc/html/commands_8h.js ViennaRNA-2.5.0/doc/html/dir_6a0733844edef9457f203c22427641a5.html ViennaRNA-2.5.0/doc/html/functions_vars_j.html ViennaRNA-2.5.0/doc/html/datastructures_2basic_8h__dep__incl_org.svg ViennaRNA-2.5.0/doc/html/group__part__func__global__deprecated.js ViennaRNA-2.5.0/doc/html/form_87.png ViennaRNA-2.5.0/doc/html/nav_h.png ViennaRNA-2.5.0/doc/html/landscape_2findpath_8h__incl.md5 ViennaRNA-2.5.0/doc/html/form_33.png ViennaRNA-2.5.0/doc/html/structvrna__dimer__conc__s.js ViennaRNA-2.5.0/doc/html/group__energy__parameters__rw.js ViennaRNA-2.5.0/doc/html/group__domains__struc.map ViennaRNA-2.5.0/doc/html/units_8h.html ViennaRNA-2.5.0/doc/html/grammar_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/group__struct__utils__wuss.html ViennaRNA-2.5.0/doc/html/group__mfe__global__deprecated.map ViennaRNA-2.5.0/doc/html/profiledist_8h__incl.md5 ViennaRNA-2.5.0/doc/html/part__func__window_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/globals_func_n.html ViennaRNA-2.5.0/doc/html/form_9.png ViennaRNA-2.5.0/doc/html/RNAturtle_8h.html ViennaRNA-2.5.0/doc/html/globals_z.html ViennaRNA-2.5.0/doc/html/multibranch__loops_8h__incl.map ViennaRNA-2.5.0/doc/html/soft_8h_source.html ViennaRNA-2.5.0/doc/html/dir_000008_000011.html ViennaRNA-2.5.0/doc/html/navtreeindex5.js ViennaRNA-2.5.0/doc/html/examples_c.html ViennaRNA-2.5.0/doc/html/group__subopt__zuker.svg ViennaRNA-2.5.0/doc/html/duplex_8h.html ViennaRNA-2.5.0/doc/html/group__command__files.svg ViennaRNA-2.5.0/doc/html/multibranch_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/hard_8h.js ViennaRNA-2.5.0/doc/html/group__struct__utils.map ViennaRNA-2.5.0/doc/html/form_92.png ViennaRNA-2.5.0/doc/html/structTwoDfold__vars__coll__graph.svg ViennaRNA-2.5.0/doc/html/functions_vars_u.html ViennaRNA-2.5.0/doc/html/group__mfe__window__deprecated.map ViennaRNA-2.5.0/doc/html/subopt__zuker_8h_source.html ViennaRNA-2.5.0/doc/html/combinatorics_8h__incl.svg ViennaRNA-2.5.0/doc/html/cpu_8h_source.html ViennaRNA-2.5.0/doc/html/io_2file__formats__msa_8h_source.html ViennaRNA-2.5.0/doc/html/part__func_8h.html ViennaRNA-2.5.0/doc/html/functions_vars_c.html ViennaRNA-2.5.0/doc/html/lists_8h_source.html ViennaRNA-2.5.0/doc/html/form_73.png ViennaRNA-2.5.0/doc/html/hairpin__loops_8h_source.html ViennaRNA-2.5.0/doc/html/multibranch__loops_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/part__func_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/structvrna__param__s__coll__graph.svg ViennaRNA-2.5.0/doc/html/group__paths__direct.md5 ViennaRNA-2.5.0/doc/html/loop__energies_8h__incl.svg ViennaRNA-2.5.0/doc/html/io_2file__formats__msa_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/equilibrium__probs_8h__incl.md5 ViennaRNA-2.5.0/doc/html/group__subopt__zuker.js ViennaRNA-2.5.0/doc/html/unstructured__domains_8h__incl.svg ViennaRNA-2.5.0/doc/html/neighbor_8h.html ViennaRNA-2.5.0/doc/html/intl11dH_8h_source.html ViennaRNA-2.5.0/doc/html/heap_8h.html ViennaRNA-2.5.0/doc/html/utils_2structures_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/2Dfold_8h__incl.svg ViennaRNA-2.5.0/doc/html/group__struct__utils__helix__list.map ViennaRNA-2.5.0/doc/html/higher__order__functions_8h_source.html ViennaRNA-2.5.0/doc/html/perturbation__fold_8h__incl.svg ViennaRNA-2.5.0/doc/html/convert_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/form_123.png ViennaRNA-2.5.0/doc/html/mfe_8h__incl.md5 ViennaRNA-2.5.0/doc/html/aln__util_8h__incl.map ViennaRNA-2.5.0/doc/html/functions_g.html ViennaRNA-2.5.0/doc/html/constraints_2basic_8h.html ViennaRNA-2.5.0/doc/html/io_2file__formats_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/form_20.png ViennaRNA-2.5.0/doc/html/group__annotation__utils.map ViennaRNA-2.5.0/doc/html/helloworld_swig.html ViennaRNA-2.5.0/doc/html/structTree__coll__graph.map ViennaRNA-2.5.0/doc/html/LPfold_8h__incl.map ViennaRNA-2.5.0/doc/html/form_43.png ViennaRNA-2.5.0/doc/html/group__fold__compound.md5 ViennaRNA-2.5.0/doc/html/group__file__utils.md5 ViennaRNA-2.5.0/doc/html/hairpin_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/form_179.png ViennaRNA-2.5.0/doc/html/constants_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/globals_r.html ViennaRNA-2.5.0/doc/html/form_136.png ViennaRNA-2.5.0/doc/html/graph_legend.svg ViennaRNA-2.5.0/doc/html/aln__util_8h_source.html ViennaRNA-2.5.0/doc/html/structnode__coll__graph.map ViennaRNA-2.5.0/doc/html/utils_2basic_8h.js ViennaRNA-2.5.0/doc/html/group__plot__layout__utils.svg ViennaRNA-2.5.0/doc/html/constants_8h_source.html ViennaRNA-2.5.0/doc/html/string__utils_8h.html ViennaRNA-2.5.0/doc/html/group__mea__fold.html ViennaRNA-2.5.0/doc/html/hairpin__loops_8h__incl.md5 ViennaRNA-2.5.0/doc/html/group__kl__neighborhood__pf_structvrna__sol__TwoD__pf__t.js ViennaRNA-2.5.0/doc/html/boltzmann__sampling_8h.html ViennaRNA-2.5.0/doc/html/utils_2basic_8h__incl.map ViennaRNA-2.5.0/doc/html/group__paths.svg ViennaRNA-2.5.0/doc/html/group__kl__neighborhood__mfe_structvrna__sol__TwoD__t.js ViennaRNA-2.5.0/doc/html/group__plotting__utils.html ViennaRNA-2.5.0/doc/html/snofold_8h_source.html ViennaRNA-2.5.0/doc/html/plotting_2structures_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/SHAPE_8h_source.html ViennaRNA-2.5.0/doc/html/structTwoDpfold__vars__coll__graph.svg ViennaRNA-2.5.0/doc/html/io_2utils_8h_source.html ViennaRNA-2.5.0/doc/html/constraints__ligand_8h__incl.md5 ViennaRNA-2.5.0/doc/html/globals_func_l.html ViennaRNA-2.5.0/doc/html/group__subopt__wuchty.map ViennaRNA-2.5.0/doc/html/part__func_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/group__eval__loops__mb.svg ViennaRNA-2.5.0/doc/html/group__struct__utils__deprecated.svg ViennaRNA-2.5.0/doc/html/navtreeindex10.js ViennaRNA-2.5.0/doc/html/fold_8h__incl.svg ViennaRNA-2.5.0/doc/html/structLIST__coll__graph.md5 ViennaRNA-2.5.0/doc/html/boltzmann__sampling_8h_source.html ViennaRNA-2.5.0/doc/html/functions_o.html ViennaRNA-2.5.0/doc/html/inverse_8h.html ViennaRNA-2.5.0/doc/html/layouts_8h.html ViennaRNA-2.5.0/doc/html/constraints__soft_8h__incl.md5 ViennaRNA-2.5.0/doc/html/strings_8h.js ViennaRNA-2.5.0/doc/html/2Dpfold_8h.js ViennaRNA-2.5.0/doc/html/part__func__up_8h_source.html ViennaRNA-2.5.0/doc/html/params_2basic_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/eval_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/group__hash__table__utils.map ViennaRNA-2.5.0/doc/html/plotting_2utils_8h__incl.map ViennaRNA-2.5.0/doc/html/formula.repository ViennaRNA-2.5.0/doc/html/group__domains.md5 ViennaRNA-2.5.0/doc/html/group__part__func__global__deprecated.html ViennaRNA-2.5.0/doc/html/ligand_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/energy__const_8h__incl.svg ViennaRNA-2.5.0/doc/html/form_41.png ViennaRNA-2.5.0/doc/html/hairpin_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/grammar_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/form_124.png ViennaRNA-2.5.0/doc/html/group__aln__utils__deprecated.html ViennaRNA-2.5.0/doc/html/group__paths__deprecated.md5 ViennaRNA-2.5.0/doc/html/group__landscape.map ViennaRNA-2.5.0/doc/html/model_8h.js ViennaRNA-2.5.0/doc/html/dp__matrices_8h_source.html ViennaRNA-2.5.0/doc/html/form_35.png ViennaRNA-2.5.0/doc/html/part__func__window_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/functions_vars_q.html ViennaRNA-2.5.0/doc/html/form_28.png ViennaRNA-2.5.0/doc/html/dir_000009_000012.html ViennaRNA-2.5.0/doc/html/group__dp__matrices_structvrna__mx__mfe__s.js ViennaRNA-2.5.0/doc/html/form_146.png ViennaRNA-2.5.0/doc/html/globals_func_m.html ViennaRNA-2.5.0/doc/html/form_85.png ViennaRNA-2.5.0/doc/html/group__struct__utils__metrics.map ViennaRNA-2.5.0/doc/html/group__paths__walk.md5 ViennaRNA-2.5.0/doc/html/callbacks.html ViennaRNA-2.5.0/doc/html/group__pf__fold.md5 ViennaRNA-2.5.0/doc/html/group__domains__struc.html ViennaRNA-2.5.0/doc/html/group__utils.map ViennaRNA-2.5.0/doc/html/secondary_structures.html ViennaRNA-2.5.0/doc/html/form_11.png ViennaRNA-2.5.0/doc/html/getting_started.html ViennaRNA-2.5.0/doc/html/group__class__fold.js ViennaRNA-2.5.0/doc/html/landscape_2neighbor_8h.js ViennaRNA-2.5.0/doc/html/layouts_8h_source.html ViennaRNA-2.5.0/doc/html/2Dfold_8h__incl.map ViennaRNA-2.5.0/doc/html/loop__energies_8h__incl.map ViennaRNA-2.5.0/doc/html/group__mfe.svg ViennaRNA-2.5.0/doc/html/BoyerMoore_8h.html ViennaRNA-2.5.0/doc/html/group__eval__move.map ViennaRNA-2.5.0/doc/html/landscape_2neighbor_8h__incl.md5 ViennaRNA-2.5.0/doc/html/group__struct__utils__plist.map ViennaRNA-2.5.0/doc/html/external_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/char__stream_8h__incl.map ViennaRNA-2.5.0/doc/html/form_145.png ViennaRNA-2.5.0/doc/html/structure__utils_8h.html ViennaRNA-2.5.0/doc/html/group__struct__utils__dot__bracket.map ViennaRNA-2.5.0/doc/html/dir_54da8e06181df970e10d68c1aa7bbb33_dep.svg ViennaRNA-2.5.0/doc/html/form_10.png ViennaRNA-2.5.0/doc/html/exterior__loops_8h.html ViennaRNA-2.5.0/doc/html/form_111.png ViennaRNA-2.5.0/doc/html/group__energy__parameters__convert.md5 ViennaRNA-2.5.0/doc/html/io.js ViennaRNA-2.5.0/doc/html/form_54.png ViennaRNA-2.5.0/doc/html/utils_2alignments_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/group__hard__constraints.md5 ViennaRNA-2.5.0/doc/html/form_51.png ViennaRNA-2.5.0/doc/html/soft_8h__incl.map ViennaRNA-2.5.0/doc/html/group__class__fold.html ViennaRNA-2.5.0/doc/html/group__part__func__window.map ViennaRNA-2.5.0/doc/html/group__subopt__and__representatives.map ViennaRNA-2.5.0/doc/html/SHAPE_8h__incl.map ViennaRNA-2.5.0/doc/html/combinatorics_8h.html ViennaRNA-2.5.0/doc/html/GCrecursion.png ViennaRNA-2.5.0/doc/html/group__struct__utils__helix__list.js ViennaRNA-2.5.0/doc/html/plot__layouts_8h.html ViennaRNA-2.5.0/doc/html/part__func__window_8h_source.html ViennaRNA-2.5.0/doc/html/alifold_8h_source.html ViennaRNA-2.5.0/doc/html/datastructures_2basic_8h__incl.svg ViennaRNA-2.5.0/doc/html/mfe__window_8h__incl.svg ViennaRNA-2.5.0/doc/html/group__constraints.md5 ViennaRNA-2.5.0/doc/html/part__func__up_8h.html ViennaRNA-2.5.0/doc/html/functions_c.html ViennaRNA-2.5.0/doc/html/boltzmann__sampling_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/combinatorics_8h.js ViennaRNA-2.5.0/doc/html/energy__const_8h_source.html ViennaRNA-2.5.0/doc/html/form_19.png ViennaRNA-2.5.0/doc/html/alphabet_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/interior__loops_8h__incl.svg ViennaRNA-2.5.0/doc/html/eval_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/form_132.png ViennaRNA-2.5.0/doc/html/neighbor_8h_source.html ViennaRNA-2.5.0/doc/html/group__mea__fold.map ViennaRNA-2.5.0/doc/html/form_59.png ViennaRNA-2.5.0/doc/html/group__hash__table__utils.svg ViennaRNA-2.5.0/doc/html/form_133.png ViennaRNA-2.5.0/doc/html/form_88.png ViennaRNA-2.5.0/doc/html/form_5.png ViennaRNA-2.5.0/doc/html/2Dpfold_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/io_2file__formats_8h.js ViennaRNA-2.5.0/doc/html/form_60.png ViennaRNA-2.5.0/doc/html/form_117.png ViennaRNA-2.5.0/doc/html/group__struct__utils__plist.svg ViennaRNA-2.5.0/doc/html/stringdist_8h_source.html ViennaRNA-2.5.0/doc/html/utils_2alignments_8h.js ViennaRNA-2.5.0/doc/html/dir_000004_000005.html ViennaRNA-2.5.0/doc/html/group__up__cofold.svg ViennaRNA-2.5.0/doc/html/globals_func_s.html ViennaRNA-2.5.0/doc/html/pages.html ViennaRNA-2.5.0/doc/html/group__struct__utils__pair__table.md5 ViennaRNA-2.5.0/doc/html/form_187.png ViennaRNA-2.5.0/doc/html/structured__domains_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/hairpin_8h__incl.md5 ViennaRNA-2.5.0/doc/html/hairpin__loops_8h__incl.svg ViennaRNA-2.5.0/doc/html/pk__plex_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/profiledist_8h_source.html ViennaRNA-2.5.0/doc/html/group__heap__utils.md5 ViennaRNA-2.5.0/doc/html/group__energy__parameters__rw.html ViennaRNA-2.5.0/doc/html/group__mfe__backtracking.svg ViennaRNA-2.5.0/doc/html/external_8h.html ViennaRNA-2.5.0/doc/html/group__heap__utils.html ViennaRNA-2.5.0/doc/html/naview_8h__incl.map ViennaRNA-2.5.0/doc/html/globals_e.html ViennaRNA-2.5.0/doc/html/structvrna__exp__param__s__coll__graph.md5 ViennaRNA-2.5.0/doc/html/move_8h_source.html ViennaRNA-2.5.0/doc/html/heat__capacity_8h__incl.md5 ViennaRNA-2.5.0/doc/html/centroid_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/annotated_dup.js ViennaRNA-2.5.0/doc/html/dp__matrices_8h__incl.map ViennaRNA-2.5.0/doc/html/group__eval__deprecated.md5 ViennaRNA-2.5.0/doc/html/group__mea__fold.md5 ViennaRNA-2.5.0/doc/html/unstructured__domains_8h.html ViennaRNA-2.5.0/doc/html/eval_8h__incl.svg ViennaRNA-2.5.0/doc/html/decomp_ml_ml_stem.svg ViennaRNA-2.5.0/doc/html/group__kl__neighborhood_org.svg ViennaRNA-2.5.0/doc/html/aln__util_8h__incl.svg ViennaRNA-2.5.0/doc/html/group__mfe__window.svg ViennaRNA-2.5.0/doc/html/utils_2basic_8h__incl.md5 ViennaRNA-2.5.0/doc/html/group__centroid__fold.js ViennaRNA-2.5.0/doc/html/io_2file__formats_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/constants_8h__dep__incl_org.svg ViennaRNA-2.5.0/doc/html/group__alphabet__utils.svg ViennaRNA-2.5.0/doc/html/landscape_2findpath_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/findpath_8h_source.html ViennaRNA-2.5.0/doc/html/centroid_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/walk_8h__incl.map ViennaRNA-2.5.0/doc/html/multibranch_8h.js ViennaRNA-2.5.0/doc/html/Crecursion.png ViennaRNA-2.5.0/doc/html/string__utils_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/group__soft__constraints.md5 ViennaRNA-2.5.0/doc/html/group__utils.md5 ViennaRNA-2.5.0/doc/html/exterior__loops_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/globals_defs.html ViennaRNA-2.5.0/doc/html/structvrna__sc__s__coll__graph.map ViennaRNA-2.5.0/doc/html/group__perturbation.svg ViennaRNA-2.5.0/doc/html/fold_8h.html ViennaRNA-2.5.0/doc/html/group__subopt__wuchty.html ViennaRNA-2.5.0/doc/html/group__subopt__and__representatives.js ViennaRNA-2.5.0/doc/html/file__formats_8h_source.html ViennaRNA-2.5.0/doc/html/units_8h__incl.map ViennaRNA-2.5.0/doc/html/units_8h_source.html ViennaRNA-2.5.0/doc/html/structure__utils_8h_source.html ViennaRNA-2.5.0/doc/html/globals_defs_m.html ViennaRNA-2.5.0/doc/html/group__mfe__global.html ViennaRNA-2.5.0/doc/html/centroid_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/form_127.png ViennaRNA-2.5.0/doc/html/form_75.png ViennaRNA-2.5.0/doc/html/functions_r.html ViennaRNA-2.5.0/doc/html/group__subopt__stochbt__deprecated.md5 ViennaRNA-2.5.0/doc/html/group__model__details.md5 ViennaRNA-2.5.0/doc/html/group__plotting__utils.md5 ViennaRNA-2.5.0/doc/html/eval_8h__incl.md5 ViennaRNA-2.5.0/doc/html/group__aln__utils.svg ViennaRNA-2.5.0/doc/html/read__epars_8h.html ViennaRNA-2.5.0/doc/html/group__eval__loops__int.md5 ViennaRNA-2.5.0/doc/html/navtreeindex9.js ViennaRNA-2.5.0/doc/html/sequence_structure_data.html ViennaRNA-2.5.0/doc/html/form_164.png ViennaRNA-2.5.0/doc/html/fold__vars_8h.html ViennaRNA-2.5.0/doc/html/structure__utils_8h__incl.map ViennaRNA-2.5.0/doc/html/RNApuzzler_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/group__aln__utils__deprecated.svg ViennaRNA-2.5.0/doc/html/group__aln__utils.map ViennaRNA-2.5.0/doc/html/mfe_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/sequence_8h__incl.md5 ViennaRNA-2.5.0/doc/html/group__part__func__global_structvrna__dimer__pf__s.js ViennaRNA-2.5.0/doc/html/structvrna__unstructured__domain__motif__s.html ViennaRNA-2.5.0/doc/html/equilibrium__probs_8h__incl.svg ViennaRNA-2.5.0/doc/html/distance_measures.html ViennaRNA-2.5.0/doc/html/profiledist_8h.js ViennaRNA-2.5.0/doc/html/group__part__func__window__deprecated.js ViennaRNA-2.5.0/doc/html/decomp_ml_ml_ml.svg ViennaRNA-2.5.0/doc/html/form_23.png ViennaRNA-2.5.0/doc/html/functions_n.html ViennaRNA-2.5.0/doc/html/gquad_8h__incl.svg ViennaRNA-2.5.0/doc/html/fold__vars_8h_source.html ViennaRNA-2.5.0/doc/html/sequence_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/form_140.png ViennaRNA-2.5.0/doc/html/unstructured__domains_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/aln__util_8h.html ViennaRNA-2.5.0/doc/html/group__paths__direct.html ViennaRNA-2.5.0/doc/html/functions_l.html ViennaRNA-2.5.0/doc/html/dir_000004_000011.html ViennaRNA-2.5.0/doc/html/mfe__window_8h__incl.md5 ViennaRNA-2.5.0/doc/html/combinatorics_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/plot__layouts_8h__incl.svg ViennaRNA-2.5.0/doc/html/constraints__SHAPE_8h.html ViennaRNA-2.5.0/doc/html/constraints__soft_8h__incl.map ViennaRNA-2.5.0/doc/html/interior__loops_8h.html ViennaRNA-2.5.0/doc/html/form_48.png ViennaRNA-2.5.0/doc/html/group__up__cofold.md5 ViennaRNA-2.5.0/doc/html/form_100.png ViennaRNA-2.5.0/doc/html/group__aln__utils__deprecated.map ViennaRNA-2.5.0/doc/html/equilibrium__probs_8h.html ViennaRNA-2.5.0/doc/html/navtreeindex3.js ViennaRNA-2.5.0/doc/html/group__hard__constraints.map ViennaRNA-2.5.0/doc/html/group__annotation__utils.md5 ViennaRNA-2.5.0/doc/html/constants_8h.js ViennaRNA-2.5.0/doc/html/form_77.png ViennaRNA-2.5.0/doc/html/equilibrium__probs_8h__incl.map ViennaRNA-2.5.0/doc/html/constraints__ligand_8h__incl.map ViennaRNA-2.5.0/doc/html/resize.js ViennaRNA-2.5.0/doc/html/layouts_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/functions.html ViennaRNA-2.5.0/doc/html/group__inverse__fold.html ViennaRNA-2.5.0/doc/html/dir_e78bc76dd94a8744fef38d57611bd23c.js ViennaRNA-2.5.0/doc/html/treedist_8h.js ViennaRNA-2.5.0/doc/html/naview_8h__incl.svg ViennaRNA-2.5.0/doc/html/move__set_8h_source.html ViennaRNA-2.5.0/doc/html/group__dos.js ViennaRNA-2.5.0/doc/html/findpath_8h.html ViennaRNA-2.5.0/doc/html/constraints_2basic_8h_source.html ViennaRNA-2.5.0/doc/html/combinatorics_8h_source.html ViennaRNA-2.5.0/doc/html/SHAPE_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/PS__dot_8h__incl.svg ViennaRNA-2.5.0/doc/html/boltzmann__sampling_8h.js ViennaRNA-2.5.0/doc/html/cofold_8h_source.html ViennaRNA-2.5.0/doc/html/form_114.png ViennaRNA-2.5.0/doc/html/subopt_8h.html ViennaRNA-2.5.0/doc/html/group__mfe__backtracking.map ViennaRNA-2.5.0/doc/html/group__paths_structvrna__path__s.js ViennaRNA-2.5.0/doc/html/subopt_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/data__structures_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/eval_8h__incl.map ViennaRNA-2.5.0/doc/html/grammar_8h__incl.md5 ViennaRNA-2.5.0/doc/html/part__func_8h.js ViennaRNA-2.5.0/doc/html/files_dup.js ViennaRNA-2.5.0/doc/html/group__dos.html ViennaRNA-2.5.0/doc/html/plotting_2utils_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/group__up__cofold.map ViennaRNA-2.5.0/doc/html/group__subopt__stochbt__deprecated.js ViennaRNA-2.5.0/doc/html/group__plot__layout__utils.html ViennaRNA-2.5.0/doc/html/landscape_2findpath_8h__incl.svg ViennaRNA-2.5.0/doc/html/plotting_2structures_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/part__func__window_8h__incl.md5 ViennaRNA-2.5.0/doc/html/constraints__hard_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/group__dp__matrices.svg ViennaRNA-2.5.0/doc/html/landscape_2walk_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/internal_8h_source.html ViennaRNA-2.5.0/doc/html/RNAturtle_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/structvrna__alignment__s__coll__graph.svg ViennaRNA-2.5.0/doc/html/aln__util_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/form_53.png ViennaRNA-2.5.0/doc/html/group__mfe.js ViennaRNA-2.5.0/doc/html/group__plotting__utils__deprecated.html ViennaRNA-2.5.0/doc/html/group__part__func__window.js ViennaRNA-2.5.0/doc/html/io_2file__formats__msa_8h.js ViennaRNA-2.5.0/doc/html/group__kl__neighborhood.md5 ViennaRNA-2.5.0/doc/html/group__struct__utils__dot__bracket.svg ViennaRNA-2.5.0/doc/html/group__message__utils.js ViennaRNA-2.5.0/doc/html/globals_func_w.html ViennaRNA-2.5.0/doc/html/datastructures_2char__stream_8h__incl.md5 ViennaRNA-2.5.0/doc/html/RNAturtle_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/group__struct__utils__metrics.html ViennaRNA-2.5.0/doc/html/globals_func_z.html ViennaRNA-2.5.0/doc/html/aln__util_8h__incl.md5 ViennaRNA-2.5.0/doc/html/data__structures_8h__incl.map ViennaRNA-2.5.0/doc/html/RNAstruct_8h.html ViennaRNA-2.5.0/doc/html/form_103.png ViennaRNA-2.5.0/doc/html/zscore_8h_source.html ViennaRNA-2.5.0/doc/html/dp__matrices_8h.html ViennaRNA-2.5.0/doc/html/grammar_8h_source.html ViennaRNA-2.5.0/doc/html/structLST__BUCKET__coll__graph.svg ViennaRNA-2.5.0/doc/html/functions_vars_i.html ViennaRNA-2.5.0/doc/html/dir_3d74ce004720553e7871f65d12e07ff9_dep.md5 ViennaRNA-2.5.0/doc/html/group__struct__utils__dot__bracket.html ViennaRNA-2.5.0/doc/html/group__mfe__global__deprecated.html ViennaRNA-2.5.0/doc/html/group__probing__data.html ViennaRNA-2.5.0/doc/html/form_131.png ViennaRNA-2.5.0/doc/html/datastructures_2basic_8h.js ViennaRNA-2.5.0/doc/html/structLIST__coll__graph.svg ViennaRNA-2.5.0/doc/html/form_55.png ViennaRNA-2.5.0/doc/html/form_176.png ViennaRNA-2.5.0/doc/html/globals_d.html ViennaRNA-2.5.0/doc/html/group__paired__modules.map ViennaRNA-2.5.0/doc/html/group__annotation__utils.js ViennaRNA-2.5.0/doc/html/group__dp__matrices.js ViennaRNA-2.5.0/doc/html/group__centroid__fold.map ViennaRNA-2.5.0/doc/html/hairpin__loops_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/data__structures_8h_source.html ViennaRNA-2.5.0/doc/html/svm_8h_source.html ViennaRNA-2.5.0/doc/html/io_8h.html ViennaRNA-2.5.0/doc/html/constraints_8h.html ViennaRNA-2.5.0/doc/html/plotting_2structures_8h.html ViennaRNA-2.5.0/doc/html/PS__dot_8h.html ViennaRNA-2.5.0/doc/html/form_171.png ViennaRNA-2.5.0/doc/html/stringdist_8h__incl.svg ViennaRNA-2.5.0/doc/html/group__thermodynamics.md5 ViennaRNA-2.5.0/doc/html/group__part__func__global.html ViennaRNA-2.5.0/doc/html/structLST__BUCKET.html ViennaRNA-2.5.0/doc/html/plot__utils_8h__incl.md5 ViennaRNA-2.5.0/doc/html/datastructures_2char__stream_8h.html ViennaRNA-2.5.0/doc/html/form_149.png ViennaRNA-2.5.0/doc/html/group__struct__utils__deprecated.html ViennaRNA-2.5.0/doc/html/utils_2basic_8h.html ViennaRNA-2.5.0/doc/html/form_175.png ViennaRNA-2.5.0/doc/html/form_181.png ViennaRNA-2.5.0/doc/html/landscape_2findpath_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/group__thermodynamics_structvrna__heat__capacity__s.js ViennaRNA-2.5.0/doc/html/group__eval__loops__int.js ViennaRNA-2.5.0/doc/html/io_2utils_8h.html ViennaRNA-2.5.0/doc/html/mfe_8h__incl.svg ViennaRNA-2.5.0/doc/html/equilibrium__probs_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/group__subopt__and__representatives.html ViennaRNA-2.5.0/doc/html/structvrna__move__s__coll__graph.md5 ViennaRNA-2.5.0/doc/html/file__utils_8h__incl.svg ViennaRNA-2.5.0/doc/html/form_46.png ViennaRNA-2.5.0/doc/html/stream__output_8h_source.html ViennaRNA-2.5.0/doc/html/group__data__structures.map ViennaRNA-2.5.0/doc/html/part__func__co_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/group__combinatorics__utils.svg ViennaRNA-2.5.0/doc/html/group__file__formats.map ViennaRNA-2.5.0/doc/html/hairpin__loops_8h.html ViennaRNA-2.5.0/doc/html/utils_2alignments_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/globals_defs_h.html ViennaRNA-2.5.0/doc/html/globals_h.html ViennaRNA-2.5.0/doc/html/alifold_8h__incl.map ViennaRNA-2.5.0/doc/html/group__energy__parameters__convert.svg ViennaRNA-2.5.0/doc/html/multibranch_8h__incl.map ViennaRNA-2.5.0/doc/html/dir_54da8e06181df970e10d68c1aa7bbb33_dep.map ViennaRNA-2.5.0/doc/html/soft_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/navtreeindex11.js ViennaRNA-2.5.0/doc/html/sequence_8h__incl.map ViennaRNA-2.5.0/doc/html/paths_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/unstructured__domains_8h__incl.md5 ViennaRNA-2.5.0/doc/html/group__struct__utils__helix__list.svg ViennaRNA-2.5.0/doc/html/group__part__func__window__deprecated.md5 ViennaRNA-2.5.0/doc/html/hash__tables_8h.js ViennaRNA-2.5.0/doc/html/group__eval__loops__int.html ViennaRNA-2.5.0/doc/html/dp__matrices_8h__incl.md5 ViennaRNA-2.5.0/doc/html/io_2file__formats__msa_8h__incl.svg ViennaRNA-2.5.0/doc/html/group__ligands__up.html ViennaRNA-2.5.0/doc/html/globals_func_h.html ViennaRNA-2.5.0/doc/html/energy_evaluation.html ViennaRNA-2.5.0/doc/html/dir_8b3d6293463b6781f7bf8859fc72e182_dep.md5 ViennaRNA-2.5.0/doc/html/group__eval__loops__mb.md5 ViennaRNA-2.5.0/doc/html/data_structures.html ViennaRNA-2.5.0/doc/html/landscape_2findpath_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/group__subopt__stochbt__deprecated.svg ViennaRNA-2.5.0/doc/html/group__domains__up.svg ViennaRNA-2.5.0/doc/html/file__formats__msa_8h_source.html ViennaRNA-2.5.0/doc/html/globals_defs_d.html ViennaRNA-2.5.0/doc/html/ProfileAln_8h_source.html ViennaRNA-2.5.0/doc/html/group__paths__direct.svg ViennaRNA-2.5.0/doc/html/utils_2basic_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/MEA_8h__incl.svg ViennaRNA-2.5.0/doc/html/io_2file__formats_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/group__cofold.svg ViennaRNA-2.5.0/doc/html/group__fold__compound.html ViennaRNA-2.5.0/doc/html/dist__vars_8h.js ViennaRNA-2.5.0/doc/html/form_83.png ViennaRNA-2.5.0/doc/html/group__hard__constraints.html ViennaRNA-2.5.0/doc/html/group__search__utils.js ViennaRNA-2.5.0/doc/html/file__formats__msa_8h__incl.svg ViennaRNA-2.5.0/doc/html/dir_45ac42044d8b814ecf694abd17d2de12.html ViennaRNA-2.5.0/doc/html/file__utils_8h__incl.md5 ViennaRNA-2.5.0/doc/html/nav_g.png ViennaRNA-2.5.0/doc/html/group__struct__utils__tree.js ViennaRNA-2.5.0/doc/html/profiledist_8h__incl.svg ViennaRNA-2.5.0/doc/html/form_8.png ViennaRNA-2.5.0/doc/html/commands_8h_source.html ViennaRNA-2.5.0/doc/html/functions_f.html ViennaRNA-2.5.0/doc/html/group__search__utils.md5 ViennaRNA-2.5.0/doc/html/search.html ViennaRNA-2.5.0/doc/html/centroid_8h.js ViennaRNA-2.5.0/doc/html/globals_defs_n.html ViennaRNA-2.5.0/doc/html/group__eval__loops__mb.html ViennaRNA-2.5.0/doc/html/group__constraints__ligand.map ViennaRNA-2.5.0/doc/html/tab_a.png ViennaRNA-2.5.0/doc/html/dir_511ee2b14d6879b7ada858ff02a7ab24.js ViennaRNA-2.5.0/doc/html/svm__utils_8h_source.html ViennaRNA-2.5.0/doc/html/group__pf__cofold.svg ViennaRNA-2.5.0/doc/html/group__combinatorics__utils.md5 ViennaRNA-2.5.0/doc/html/neighbor_8h__incl.map ViennaRNA-2.5.0/doc/html/stream__output_8h__incl.md5 ViennaRNA-2.5.0/doc/html/group__grammar.html ViennaRNA-2.5.0/doc/html/commands_8h__incl.map ViennaRNA-2.5.0/doc/html/landscape_2walk_8h__incl.map ViennaRNA-2.5.0/doc/html/constants_8h__incl.svg ViennaRNA-2.5.0/doc/html/naview_8h_source.html ViennaRNA-2.5.0/doc/html/plot__layouts_8h__incl.md5 ViennaRNA-2.5.0/doc/html/form_101.png ViennaRNA-2.5.0/doc/html/form_157.png ViennaRNA-2.5.0/doc/html/plotting_2naview_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/landscape_2neighbor_8h__incl.map ViennaRNA-2.5.0/doc/html/group__up__cofold.html ViennaRNA-2.5.0/doc/html/interior__loops_8h__incl.map ViennaRNA-2.5.0/doc/html/group__part__func__global__deprecated.map ViennaRNA-2.5.0/doc/html/duplex_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/group__fold__compound.js ViennaRNA-2.5.0/doc/html/group__subopt__wuchty.svg ViennaRNA-2.5.0/doc/html/dir_000003_000007.html ViennaRNA-2.5.0/doc/html/group__eval__move.html ViennaRNA-2.5.0/doc/html/form_108.png ViennaRNA-2.5.0/doc/html/ligand_8h_source.html ViennaRNA-2.5.0/doc/html/intl21_8h_source.html ViennaRNA-2.5.0/doc/html/subopt_8h_source.html ViennaRNA-2.5.0/doc/html/concepts.js ViennaRNA-2.5.0/doc/html/datastructures_2basic_8h.html ViennaRNA-2.5.0/doc/html/group__struct__utils__tree.md5 ViennaRNA-2.5.0/doc/html/unstructured__domains_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/plotting_2alignments_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/group__constraints__ligand.md5 ViennaRNA-2.5.0/doc/html/equilibrium__probs_8h_source.html ViennaRNA-2.5.0/doc/html/BoyerMoore_8h.js ViennaRNA-2.5.0/doc/html/search/ ViennaRNA-2.5.0/doc/html/search/search_m.png ViennaRNA-2.5.0/doc/html/search/search_r.png ViennaRNA-2.5.0/doc/html/search/search.js ViennaRNA-2.5.0/doc/html/search/search_l.png ViennaRNA-2.5.0/doc/html/search/mag.svg ViennaRNA-2.5.0/doc/html/search/search.css ViennaRNA-2.5.0/doc/html/sequence_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/findpath_8h__incl.svg ViennaRNA-2.5.0/doc/html/constants_8h.html ViennaRNA-2.5.0/doc/html/datastructures_2basic_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/treedist_8h.html ViennaRNA-2.5.0/doc/html/wrappers.html ViennaRNA-2.5.0/doc/html/external_8h_source.html ViennaRNA-2.5.0/doc/html/multibranch__loops_8h.html ViennaRNA-2.5.0/doc/html/SHAPE_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/ligand_8h.js ViennaRNA-2.5.0/doc/html/datastructures_2stream__output_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/group__cofold.html ViennaRNA-2.5.0/doc/html/form_91.png ViennaRNA-2.5.0/doc/html/grammar_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/concentrations_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/all_8h__incl.svg ViennaRNA-2.5.0/doc/html/form_39.png ViennaRNA-2.5.0/doc/html/form_50.png ViennaRNA-2.5.0/doc/html/group__thermodynamics.map ViennaRNA-2.5.0/doc/html/convert__epars_8h.html ViennaRNA-2.5.0/doc/html/fold_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/form_166.png ViennaRNA-2.5.0/doc/html/structvrna__data__linear__s__coll__graph.svg ViennaRNA-2.5.0/doc/html/functions_j.html ViennaRNA-2.5.0/doc/html/install.html ViennaRNA-2.5.0/doc/html/group__perturbation.map ViennaRNA-2.5.0/doc/html/utils_8h__incl.svg ViennaRNA-2.5.0/doc/html/bug.html ViennaRNA-2.5.0/doc/html/form_7.png ViennaRNA-2.5.0/doc/html/multibranch__loops_8h__incl.md5 ViennaRNA-2.5.0/doc/html/group__aln__utils_structvrna__pinfo__s.js ViennaRNA-2.5.0/doc/html/gquad_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/plots.html ViennaRNA-2.5.0/doc/html/cofold_8h.js ViennaRNA-2.5.0/doc/html/dir_94a42affd43e91f8a4e9ff1a4c7599c5.js ViennaRNA-2.5.0/doc/html/rip.html ViennaRNA-2.5.0/doc/html/B_prod_rule.svg ViennaRNA-2.5.0/doc/html/group__ligands__up.svg ViennaRNA-2.5.0/doc/html/structLST__BUCKET__coll__graph.md5 ViennaRNA-2.5.0/doc/html/group__hash__table__utils.html ViennaRNA-2.5.0/doc/html/functions_s.html ViennaRNA-2.5.0/doc/html/group__grammar.map ViennaRNA-2.5.0/doc/html/plot__layouts_8h_source.html ViennaRNA-2.5.0/doc/html/exterior__loops_8h__incl.md5 ViennaRNA-2.5.0/doc/html/ribo_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/SHAPE_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/structTree__coll__graph.svg ViennaRNA-2.5.0/doc/html/dir_000005_000004.html ViennaRNA-2.5.0/doc/html/datastructures_2stream__output_8h.js ViennaRNA-2.5.0/doc/html/part__func__window_8h.js ViennaRNA-2.5.0/doc/html/subopt_8h__incl.map ViennaRNA-2.5.0/doc/html/pk__plex_8h_source.html ViennaRNA-2.5.0/doc/html/form_42.png ViennaRNA-2.5.0/doc/html/group__energy__parameters__rw.svg ViennaRNA-2.5.0/doc/html/form_109.png ViennaRNA-2.5.0/doc/html/form_96.png ViennaRNA-2.5.0/doc/html/treedist_8h_source.html ViennaRNA-2.5.0/doc/html/dir_45ac42044d8b814ecf694abd17d2de12_dep.map ViennaRNA-2.5.0/doc/html/constants_8h__incl.map ViennaRNA-2.5.0/doc/html/group__up__cofold.js ViennaRNA-2.5.0/doc/html/params_2basic_8h_source.html ViennaRNA-2.5.0/doc/html/group__paths.js ViennaRNA-2.5.0/doc/html/navtreeindex2.js ViennaRNA-2.5.0/doc/html/group__search__utils.map ViennaRNA-2.5.0/doc/html/group__hash__table__utils.js ViennaRNA-2.5.0/doc/html/decomp_ext_ext_stem1.svg ViennaRNA-2.5.0/doc/html/form_183.png ViennaRNA-2.5.0/doc/html/form_1.png ViennaRNA-2.5.0/doc/html/part__func__window_8h__incl.svg ViennaRNA-2.5.0/doc/html/PS__dot_8h__incl.md5 ViennaRNA-2.5.0/doc/html/soft_8h.html ViennaRNA-2.5.0/doc/html/MEA_8h__incl.map ViennaRNA-2.5.0/doc/html/group__pf__cofold.md5 ViennaRNA-2.5.0/doc/html/navtreeindex7.js ViennaRNA-2.5.0/doc/html/form_37.png ViennaRNA-2.5.0/doc/html/pk__plex_8h__incl.md5 ViennaRNA-2.5.0/doc/html/bdwn.png ViennaRNA-2.5.0/doc/html/group__paired__modules.html ViennaRNA-2.5.0/doc/html/functions_m.html ViennaRNA-2.5.0/doc/html/group__struct__utils__deprecated.js ViennaRNA-2.5.0/doc/html/cofold_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/perturbation__fold_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/unstructured__domains_8h_source.html ViennaRNA-2.5.0/doc/html/landscape_2neighbor_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/group__paired__modules.md5 ViennaRNA-2.5.0/doc/html/ugly__bt_8h_source.html ViennaRNA-2.5.0/doc/html/subopt_8h__incl.svg ViennaRNA-2.5.0/doc/html/globals_func_i.html ViennaRNA-2.5.0/doc/html/globals_c.html ViennaRNA-2.5.0/doc/html/group__struct__utils__helix__list.md5 ViennaRNA-2.5.0/doc/html/hash__tables_8h_source.html ViennaRNA-2.5.0/doc/html/sequence_8h_source.html ViennaRNA-2.5.0/doc/html/concentrations_8h.js ViennaRNA-2.5.0/doc/html/findpath_8h__incl.md5 ViennaRNA-2.5.0/doc/html/concentrations_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/ribo_8h.html ViennaRNA-2.5.0/doc/html/constraints__SHAPE_8h__incl.map ViennaRNA-2.5.0/doc/html/group__kl__neighborhood__mfe_structTwoDfold__vars.js ViennaRNA-2.5.0/doc/html/group__part__func__global.js ViennaRNA-2.5.0/doc/html/utils_2alignments_8h.html ViennaRNA-2.5.0/doc/html/multibranch_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/constraints__hard_8h__incl.md5 ViennaRNA-2.5.0/doc/html/group__data__structures.md5 ViennaRNA-2.5.0/doc/html/datastructures_2basic_8h_source.html ViennaRNA-2.5.0/doc/html/group__model__details.map ViennaRNA-2.5.0/doc/html/form_22.png ViennaRNA-2.5.0/doc/html/data__structures_8h.html ViennaRNA-2.5.0/doc/html/group__alignment__plots.md5 ViennaRNA-2.5.0/doc/html/form_180.png ViennaRNA-2.5.0/doc/html/structvrna__sc__s__coll__graph.svg ViennaRNA-2.5.0/doc/html/strings_8h.html ViennaRNA-2.5.0/doc/html/group__mfe__backtracking.js ViennaRNA-2.5.0/doc/html/constraints__soft_8h.html ViennaRNA-2.5.0/doc/html/group__subopt__stochbt.md5 ViennaRNA-2.5.0/doc/html/group__hard__constraints.js ViennaRNA-2.5.0/doc/html/landscape_2findpath_8h__incl.map ViennaRNA-2.5.0/doc/html/read__epars_8h_source.html ViennaRNA-2.5.0/doc/html/equilibrium__probs_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/mm_8h__incl.map ViennaRNA-2.5.0/doc/html/globals_defs_g.html ViennaRNA-2.5.0/doc/html/globals_dup.js ViennaRNA-2.5.0/doc/html/form_135.png ViennaRNA-2.5.0/doc/html/SHAPE_8h__incl.svg ViennaRNA-2.5.0/doc/html/subopt_8h__incl.md5 ViennaRNA-2.5.0/doc/html/landscape_2walk_8h.js ViennaRNA-2.5.0/doc/html/probabilities_8h_source.html ViennaRNA-2.5.0/doc/html/group__search__utils.svg ViennaRNA-2.5.0/doc/html/examples.html ViennaRNA-2.5.0/doc/html/form_15.png ViennaRNA-2.5.0/doc/html/subopt_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/model_8h__dep__incl_org.svg ViennaRNA-2.5.0/doc/html/form_29.png ViennaRNA-2.5.0/doc/html/structvrna__alignment__s__coll__graph.map ViennaRNA-2.5.0/doc/html/perturbation__fold_8h__incl.md5 ViennaRNA-2.5.0/doc/html/fold__compound_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/boltzmann__sampling_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/io_2file__formats_8h.html ViennaRNA-2.5.0/doc/html/group__energy__parameters.html ViennaRNA-2.5.0/doc/html/group__domains__up_structvrna__unstructured__domain__s.js ViennaRNA-2.5.0/doc/html/form_137.png ViennaRNA-2.5.0/doc/html/fold__compound_8h.js ViennaRNA-2.5.0/doc/html/model_8h.html ViennaRNA-2.5.0/doc/html/part__func_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/file__utils_8h_source.html ViennaRNA-2.5.0/doc/html/dir_000004_000010.html ViennaRNA-2.5.0/doc/html/plot__utils_8h__incl.svg ViennaRNA-2.5.0/doc/html/fold__compound_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/mm_8h_source.html ViennaRNA-2.5.0/doc/html/dist__vars_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/structvrna__data__linear__s__coll__graph.md5 ViennaRNA-2.5.0/doc/html/params_8h__incl.md5 ViennaRNA-2.5.0/doc/html/form_104.png ViennaRNA-2.5.0/doc/html/plot__structure_8h.html ViennaRNA-2.5.0/doc/html/boltzmann__sampling_8h__incl.map ViennaRNA-2.5.0/doc/html/index.html ViennaRNA-2.5.0/doc/html/group__domains__up.html ViennaRNA-2.5.0/doc/html/group__command__files.html ViennaRNA-2.5.0/doc/html/form_119.png ViennaRNA-2.5.0/doc/html/group__fold__compound_structvrna__fc__s.js ViennaRNA-2.5.0/doc/html/RNApuzzler_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/centroid_8h__incl.svg ViennaRNA-2.5.0/doc/html/probabilities_8h__incl.svg ViennaRNA-2.5.0/doc/html/unstructured__domains_8h__incl.map ViennaRNA-2.5.0/doc/html/alifold_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/plotting_2alignments_8h.js ViennaRNA-2.5.0/doc/html/group__model__details_structvrna__md__s.js ViennaRNA-2.5.0/doc/html/structvrna__fc__s__coll__graph_org.svg ViennaRNA-2.5.0/doc/html/energy__par_8h.html ViennaRNA-2.5.0/doc/html/paths_8h__incl.md5 ViennaRNA-2.5.0/doc/html/special__const_8h_source.html ViennaRNA-2.5.0/doc/html/external_8h.js ViennaRNA-2.5.0/doc/html/annotated.html ViennaRNA-2.5.0/doc/html/mfe__window_8h__incl.map ViennaRNA-2.5.0/doc/html/all_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/io_2file__formats_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/group__paths__deprecated.html ViennaRNA-2.5.0/doc/html/multibranch_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/group__struct__utils__wuss.js ViennaRNA-2.5.0/doc/html/group__soft__constraints.html ViennaRNA-2.5.0/doc/html/group__file__formats.html ViennaRNA-2.5.0/doc/html/duplex_8h_source.html ViennaRNA-2.5.0/doc/html/hairpin_8h.js ViennaRNA-2.5.0/doc/html/Lfold_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/pk__plex_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/RNAturtle_8h.js ViennaRNA-2.5.0/doc/html/soft_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/globals_t.html ViennaRNA-2.5.0/doc/html/group__struct__utils__dot__bracket.md5 ViennaRNA-2.5.0/doc/html/recursions.svg ViennaRNA-2.5.0/doc/html/group__data__structures.svg ViennaRNA-2.5.0/doc/html/group__mfe__window__deprecated.svg ViennaRNA-2.5.0/doc/html/group__ligands__up.map ViennaRNA-2.5.0/doc/html/io_2utils_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/group__kl__neighborhood.html ViennaRNA-2.5.0/doc/html/datastructures_2char__stream_8h__incl.svg ViennaRNA-2.5.0/doc/html/Lfold_8h__incl.map ViennaRNA-2.5.0/doc/html/group__hard__constraints_structvrna__hc__s.js ViennaRNA-2.5.0/doc/html/alphabet_8h_source.html ViennaRNA-2.5.0/doc/html/group__command__files.js ViennaRNA-2.5.0/doc/html/multibranch_8h.html ViennaRNA-2.5.0/doc/html/convert__epars_8h_source.html ViennaRNA-2.5.0/doc/html/form_97.png ViennaRNA-2.5.0/doc/html/globals_defs_t.html ViennaRNA-2.5.0/doc/html/fold_8h__incl.md5 ViennaRNA-2.5.0/doc/html/form_173.png ViennaRNA-2.5.0/doc/html/globals_func_b.html ViennaRNA-2.5.0/doc/html/group__units.map ViennaRNA-2.5.0/doc/html/decomp_hp.svg ViennaRNA-2.5.0/doc/html/datastructures_2char__stream_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/form_186.png ViennaRNA-2.5.0/doc/html/group__struct__utils.js ViennaRNA-2.5.0/doc/html/structvrna__exp__param__s__coll__graph.svg ViennaRNA-2.5.0/doc/html/struct__struct__en.html ViennaRNA-2.5.0/doc/html/plotting_2naview_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/ligand_8h__incl.md5 ViennaRNA-2.5.0/doc/html/2Dpfold_8h_source.html ViennaRNA-2.5.0/doc/html/group__struct__utils__tree.html ViennaRNA-2.5.0/doc/html/soft_8h__incl.md5 ViennaRNA-2.5.0/doc/html/form_102.png ViennaRNA-2.5.0/doc/html/group__thermodynamics.svg ViennaRNA-2.5.0/doc/html/utils_8h__incl.map ViennaRNA-2.5.0/doc/html/globals_i.html ViennaRNA-2.5.0/doc/html/alphabet_8h__incl.svg ViennaRNA-2.5.0/doc/html/globals_o.html ViennaRNA-2.5.0/doc/html/fold_8h_source.html ViennaRNA-2.5.0/doc/html/group__mfe__global.md5 ViennaRNA-2.5.0/doc/html/ribo_8h_source.html ViennaRNA-2.5.0/doc/html/group__perturbation.html ViennaRNA-2.5.0/doc/html/PS__dot_8h_source.html ViennaRNA-2.5.0/doc/html/landscape_2findpath_8h.js ViennaRNA-2.5.0/doc/html/group__paths_org.svg ViennaRNA-2.5.0/doc/html/api_features.html ViennaRNA-2.5.0/doc/html/layouts_8h__incl.svg ViennaRNA-2.5.0/doc/html/globals_defs_p.html ViennaRNA-2.5.0/doc/html/io_8h.js ViennaRNA-2.5.0/doc/html/globals_n.html ViennaRNA-2.5.0/doc/html/all_8h__incl.map ViennaRNA-2.5.0/doc/html/group__model__details.js ViennaRNA-2.5.0/doc/html/functions_u.html ViennaRNA-2.5.0/doc/html/dir_000011_000004.html ViennaRNA-2.5.0/doc/html/constants_8h__incl.md5 ViennaRNA-2.5.0/doc/html/doxygen.css ViennaRNA-2.5.0/doc/html/2Dfold_8h.js ViennaRNA-2.5.0/doc/html/constraints_2basic_8h.js ViennaRNA-2.5.0/doc/html/group__eval__loops__mb.map ViennaRNA-2.5.0/doc/html/constraints__ligand_8h_source.html ViennaRNA-2.5.0/doc/html/plotting_2structures_8h_source.html ViennaRNA-2.5.0/doc/html/structnode__coll__graph.md5 ViennaRNA-2.5.0/doc/html/dir_000003_000008.html ViennaRNA-2.5.0/doc/html/params_2basic_8h.js ViennaRNA-2.5.0/doc/html/form_168.png ViennaRNA-2.5.0/doc/html/hard_8h__incl.md5 ViennaRNA-2.5.0/doc/html/group__subopt__stochbt.map ViennaRNA-2.5.0/doc/html/utils_2alignments_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/constraints_2basic_8h__incl.map ViennaRNA-2.5.0/doc/html/duplex_8h__incl.svg ViennaRNA-2.5.0/doc/html/form_74.png ViennaRNA-2.5.0/doc/html/multibranch_8h__incl.md5 ViennaRNA-2.5.0/doc/html/group__mfe__window.html ViennaRNA-2.5.0/doc/html/constraints__SHAPE_8h__incl.md5 ViennaRNA-2.5.0/doc/html/constants_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/vrna__config_8h_source.html ViennaRNA-2.5.0/doc/html/paths_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/internal_8h.html ViennaRNA-2.5.0/doc/html/mm_8h.html ViennaRNA-2.5.0/doc/html/dir_1ddf03e95848b6488d60454f7a385ded.html ViennaRNA-2.5.0/doc/html/dir_54da8e06181df970e10d68c1aa7bbb33_dep.md5 ViennaRNA-2.5.0/doc/html/group__eval__loops__hp.html ViennaRNA-2.5.0/doc/html/constraints_2basic_8h__dep__incl_org.svg ViennaRNA-2.5.0/doc/html/soft_8h__dep__incl_org.svg ViennaRNA-2.5.0/doc/html/group__struct__utils__metrics.js ViennaRNA-2.5.0/doc/html/sequence_8h.html ViennaRNA-2.5.0/doc/html/RNApuzzler_8h.html ViennaRNA-2.5.0/doc/html/group__SHAPE__reactivities.svg ViennaRNA-2.5.0/doc/html/form_70.png ViennaRNA-2.5.0/doc/html/decomp_il.svg ViennaRNA-2.5.0/doc/html/structure__utils_8h__incl.svg ViennaRNA-2.5.0/doc/html/strings_8h__incl.map ViennaRNA-2.5.0/doc/html/modules.js ViennaRNA-2.5.0/doc/html/dir_1ddf03e95848b6488d60454f7a385ded_dep.md5 ViennaRNA-2.5.0/doc/html/group__alignment__plots.svg ViennaRNA-2.5.0/doc/html/form_72.png ViennaRNA-2.5.0/doc/html/hairpin_8h__incl.map ViennaRNA-2.5.0/doc/html/group__struct__utils__pair__table.map ViennaRNA-2.5.0/doc/html/globals_func_p.html ViennaRNA-2.5.0/doc/html/group__heap__utils.svg ViennaRNA-2.5.0/doc/html/structnode__coll__graph.svg ViennaRNA-2.5.0/doc/html/probabilities_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/group__domains__struc.svg ViennaRNA-2.5.0/doc/html/mfe__window_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/data__structures_8h__incl.svg ViennaRNA-2.5.0/doc/html/group__class__fold.svg ViennaRNA-2.5.0/doc/html/globals_func_f.html ViennaRNA-2.5.0/doc/html/globals_defs_o.html ViennaRNA-2.5.0/doc/html/group__part__func__window__deprecated.map ViennaRNA-2.5.0/doc/html/group__buffer__utils.map ViennaRNA-2.5.0/doc/html/group__units.js ViennaRNA-2.5.0/doc/html/group__soft__constraints.svg ViennaRNA-2.5.0/doc/html/structvrna__subopt__sol__s.js ViennaRNA-2.5.0/doc/html/utils_2structures_8h__dep__incl_org.svg ViennaRNA-2.5.0/doc/html/plot__aln_8h_source.html ViennaRNA-2.5.0/doc/html/RNApuzzler_8h.js ViennaRNA-2.5.0/doc/html/dp__matrices_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/form_147.png ViennaRNA-2.5.0/doc/html/plot__structure_8h_source.html ViennaRNA-2.5.0/doc/html/ligand_binding.html ViennaRNA-2.5.0/doc/html/functions_t.html ViennaRNA-2.5.0/doc/html/group__string__utils.js ViennaRNA-2.5.0/doc/html/RNAstruct_8h_source.html ViennaRNA-2.5.0/doc/html/pk__plex_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/dir_8b3d6293463b6781f7bf8859fc72e182.js ViennaRNA-2.5.0/doc/html/group__eval__loops__mb.js ViennaRNA-2.5.0/doc/html/dir_000010_000004.html ViennaRNA-2.5.0/doc/html/LPfold_8h__incl.md5 ViennaRNA-2.5.0/doc/html/external_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/soft_8h__incl.svg ViennaRNA-2.5.0/doc/html/naview_8h__incl.md5 ViennaRNA-2.5.0/doc/html/1_88_84__epars_8h_source.html ViennaRNA-2.5.0/doc/html/unstructured__domains_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/part__func_8h__incl.md5 ViennaRNA-2.5.0/doc/html/group__struct__utils__wuss.md5 ViennaRNA-2.5.0/doc/html/group__eval.html ViennaRNA-2.5.0/doc/html/group__mfe__global.js ViennaRNA-2.5.0/doc/html/ligand_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/fold__vars_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/examples.js ViennaRNA-2.5.0/doc/html/gquad_8h.js ViennaRNA-2.5.0/doc/html/fold__vars_8h.js ViennaRNA-2.5.0/doc/html/mm_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/io_2file__formats__msa_8h__incl.md5 ViennaRNA-2.5.0/doc/html/group__cofold.map ViennaRNA-2.5.0/doc/html/group__eval__deprecated.html ViennaRNA-2.5.0/doc/html/edit__cost_8h.html ViennaRNA-2.5.0/doc/html/group__soft__constraints.js ViennaRNA-2.5.0/doc/html/sequence_8h__incl.svg ViennaRNA-2.5.0/doc/html/globals_u.html ViennaRNA-2.5.0/doc/html/group__eval__move.md5 ViennaRNA-2.5.0/doc/html/intl22_8h_source.html ViennaRNA-2.5.0/doc/html/group__alphabet__utils.md5 ViennaRNA-2.5.0/doc/html/svgpan.js ViennaRNA-2.5.0/doc/html/convert_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/datastructures_2basic_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/char__stream_8h.html ViennaRNA-2.5.0/doc/html/mfe_8h.html ViennaRNA-2.5.0/doc/html/part__func__up_8h__incl.map ViennaRNA-2.5.0/doc/html/alphabet_8h__incl.md5 ViennaRNA-2.5.0/doc/html/group__domains.html ViennaRNA-2.5.0/doc/html/dir_45ac42044d8b814ecf694abd17d2de12_dep.md5 ViennaRNA-2.5.0/doc/html/energy__par_8h__incl.svg ViennaRNA-2.5.0/doc/html/group__probing__data.md5 ViennaRNA-2.5.0/doc/html/alifold_8h__incl.md5 ViennaRNA-2.5.0/doc/html/sequence_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/params_2basic_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/group__part__func__window.html ViennaRNA-2.5.0/doc/html/group__aln__utils.md5 ViennaRNA-2.5.0/doc/html/fold__vars_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/group__struct__utils.html ViennaRNA-2.5.0/doc/html/form_86.png ViennaRNA-2.5.0/doc/html/paths_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/group__combinatorics__utils.js ViennaRNA-2.5.0/doc/html/fold_8h.js ViennaRNA-2.5.0/doc/html/part__func__window_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/structPostorder__list.html ViennaRNA-2.5.0/doc/html/dir_94a42affd43e91f8a4e9ff1a4c7599c5_dep.map ViennaRNA-2.5.0/doc/html/edit__cost_8h_source.html ViennaRNA-2.5.0/doc/html/utils_2basic_8h__incl.svg ViennaRNA-2.5.0/doc/html/paths_8h_source.html ViennaRNA-2.5.0/doc/html/utils_2structures_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/group__file__formats__msa.js ViennaRNA-2.5.0/doc/html/group__energy__parameters__convert.js ViennaRNA-2.5.0/doc/html/group__data__structures.js ViennaRNA-2.5.0/doc/html/form_170.png ViennaRNA-2.5.0/doc/html/group__dp__matrices.html ViennaRNA-2.5.0/doc/html/form_118.png ViennaRNA-2.5.0/doc/html/group__buffer__utils.html ViennaRNA-2.5.0/doc/html/globals_func_e.html ViennaRNA-2.5.0/doc/html/char__stream_8h__incl.svg ViennaRNA-2.5.0/doc/html/file__formats_8h.html ViennaRNA-2.5.0/doc/html/globals_defs_v.html ViennaRNA-2.5.0/doc/html/fold__compound_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/convert__epars_8h__incl.md5 ViennaRNA-2.5.0/doc/html/dir_45ac42044d8b814ecf694abd17d2de12.js ViennaRNA-2.5.0/doc/html/landscape_2walk_8h.html ViennaRNA-2.5.0/doc/html/group__units.md5 ViennaRNA-2.5.0/doc/html/globals_func.html ViennaRNA-2.5.0/doc/html/group__search__utils.html ViennaRNA-2.5.0/doc/html/mfe_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/structvrna__move__s__coll__graph.map ViennaRNA-2.5.0/doc/html/form_154.png ViennaRNA-2.5.0/doc/html/plot__structure_8h__incl.map ViennaRNA-2.5.0/doc/html/dir_ff6b5900125bb0123025c1cb24bdc726.html ViennaRNA-2.5.0/doc/html/probabilities_8h__incl.map ViennaRNA-2.5.0/doc/html/file__formats_8h__incl.map ViennaRNA-2.5.0/doc/html/group__part__func__window__deprecated.svg ViennaRNA-2.5.0/doc/html/form_163.png ViennaRNA-2.5.0/doc/html/form_62.png ViennaRNA-2.5.0/doc/html/mfe__window_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/combinatorics_8h__incl.map ViennaRNA-2.5.0/doc/html/grammar_8h__dep__incl_org.svg ViennaRNA-2.5.0/doc/html/dir_94a42affd43e91f8a4e9ff1a4c7599c5_dep.md5 ViennaRNA-2.5.0/doc/html/mfe__window_8h.js ViennaRNA-2.5.0/doc/html/structLIST__coll__graph.map ViennaRNA-2.5.0/doc/html/utils_2structures_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/Lfold_8h.js ViennaRNA-2.5.0/doc/html/RNAturtle_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/navtreeindex4.js ViennaRNA-2.5.0/doc/html/functions_vars.js ViennaRNA-2.5.0/doc/html/data__structures_8h__incl.md5 ViennaRNA-2.5.0/doc/html/group__plotting__utils__deprecated.js ViennaRNA-2.5.0/doc/html/file__utils_8h__incl.map ViennaRNA-2.5.0/doc/html/form_121.png ViennaRNA-2.5.0/doc/html/constraints__soft_8h__incl.svg ViennaRNA-2.5.0/doc/html/landscape_2neighbor_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/RNAturtle_8h_source.html ViennaRNA-2.5.0/doc/html/group__gquads.map ViennaRNA-2.5.0/doc/html/pf__multifold_8h_source.html ViennaRNA-2.5.0/doc/html/dist__vars_8h_source.html ViennaRNA-2.5.0/doc/html/io_2file__formats_8h__incl.md5 ViennaRNA-2.5.0/doc/html/form_67.png ViennaRNA-2.5.0/doc/html/group__pf__fold.map ViennaRNA-2.5.0/doc/html/read__epars_8h__incl.map ViennaRNA-2.5.0/doc/html/group__SHAPE__reactivities.js ViennaRNA-2.5.0/doc/html/group__subopt__and__representatives.md5 ViennaRNA-2.5.0/doc/html/tab_b.png ViennaRNA-2.5.0/doc/html/concepts.html ViennaRNA-2.5.0/doc/html/walk_8h__incl.svg ViennaRNA-2.5.0/doc/html/group__energy__parameters.md5 ViennaRNA-2.5.0/doc/html/form_36.png ViennaRNA-2.5.0/doc/html/internal_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/globals_func_t.html ViennaRNA-2.5.0/doc/html/group__file__formats.svg ViennaRNA-2.5.0/doc/html/functions_vars_b.html ViennaRNA-2.5.0/doc/html/inverse_8h_source.html ViennaRNA-2.5.0/doc/html/group__message__utils.map ViennaRNA-2.5.0/doc/html/part__func__window_8h.html ViennaRNA-2.5.0/doc/html/group__string__utils.md5 ViennaRNA-2.5.0/doc/html/dir_94a42affd43e91f8a4e9ff1a4c7599c5.html ViennaRNA-2.5.0/doc/html/part__func_8h_source.html ViennaRNA-2.5.0/doc/html/group__subopt__stochbt__deprecated.html ViennaRNA-2.5.0/doc/html/group__part__func__window.md5 ViennaRNA-2.5.0/doc/html/read__epars_8h__incl.svg ViennaRNA-2.5.0/doc/html/hard_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/decomp_ml_coaxial.svg ViennaRNA-2.5.0/doc/html/form_14.png ViennaRNA-2.5.0/doc/html/profiledist_8h__incl.map ViennaRNA-2.5.0/doc/html/pf_algorithm.html ViennaRNA-2.5.0/doc/html/group__ligand__binding.md5 ViennaRNA-2.5.0/doc/html/group__eval__loops.js ViennaRNA-2.5.0/doc/html/fold_8h__incl.map ViennaRNA-2.5.0/doc/html/move_8h__dep__incl_org.svg ViennaRNA-2.5.0/doc/html/ligand_8h.html ViennaRNA-2.5.0/doc/html/dir_45ac42044d8b814ecf694abd17d2de12_dep.svg ViennaRNA-2.5.0/doc/html/decomp_ext_ext_stem.svg ViennaRNA-2.5.0/doc/html/structTree.html ViennaRNA-2.5.0/doc/html/functions_dup.js ViennaRNA-2.5.0/doc/html/consensus_structures.html ViennaRNA-2.5.0/doc/html/group__paths.md5 ViennaRNA-2.5.0/doc/html/unstructured__domains_8h.js ViennaRNA-2.5.0/doc/html/plotting_2utils_8h__incl.svg ViennaRNA-2.5.0/doc/html/form_47.png ViennaRNA-2.5.0/doc/html/paths_8h.js ViennaRNA-2.5.0/doc/html/group__ligands__up.md5 ViennaRNA-2.5.0/doc/html/model_settings.html ViennaRNA-2.5.0/doc/html/group__kl__neighborhood__stochbt.js ViennaRNA-2.5.0/doc/html/energy__const_8h.html ViennaRNA-2.5.0/doc/html/inverse_8h.js ViennaRNA-2.5.0/doc/html/group__perturbation.md5 ViennaRNA-2.5.0/doc/html/form_71.png ViennaRNA-2.5.0/doc/html/profiledist_8h.html ViennaRNA-2.5.0/doc/html/group__alphabet__utils.html ViennaRNA-2.5.0/doc/html/params_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/group__utils.svg ViennaRNA-2.5.0/doc/html/utils_2structures_8h.html ViennaRNA-2.5.0/doc/html/form_165.png ViennaRNA-2.5.0/doc/html/group__mfe__window.map ViennaRNA-2.5.0/doc/html/alphabet_8h.html ViennaRNA-2.5.0/doc/html/group__alphabet__utils.map ViennaRNA-2.5.0/doc/html/group__gquads.js ViennaRNA-2.5.0/doc/html/dist__vars_8h.html ViennaRNA-2.5.0/doc/html/MEA_8h_source.html ViennaRNA-2.5.0/doc/html/plot__structure_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/group__part__func__global_structvrna__multimer__pf__s.js ViennaRNA-2.5.0/doc/html/default_8h_source.html ViennaRNA-2.5.0/doc/html/globals_defs_u.html ViennaRNA-2.5.0/doc/html/group__paths__direct.map ViennaRNA-2.5.0/doc/html/group__mfe__window.md5 ViennaRNA-2.5.0/doc/html/form_44.png ViennaRNA-2.5.0/doc/html/plotting_2structures_8h.js ViennaRNA-2.5.0/doc/html/fold__vars_8h__incl.md5 ViennaRNA-2.5.0/doc/html/functions_k.html ViennaRNA-2.5.0/doc/html/group__part__func__global.svg ViennaRNA-2.5.0/doc/html/group__energy__parameters.js ViennaRNA-2.5.0/doc/html/group__gquads.html ViennaRNA-2.5.0/doc/html/ligand_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/group__paths.map ViennaRNA-2.5.0/doc/html/model_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/string__utils_8h__incl.svg ViennaRNA-2.5.0/doc/html/group__mfe__window__deprecated.html ViennaRNA-2.5.0/doc/html/group__units.svg ViennaRNA-2.5.0/doc/html/alifold_8h.js ViennaRNA-2.5.0/doc/html/LPfold_8h.html ViennaRNA-2.5.0/doc/html/closed.png ViennaRNA-2.5.0/doc/html/multibranch_8h__incl.svg ViennaRNA-2.5.0/doc/html/group__eval__loops__hp.map ViennaRNA-2.5.0/doc/html/form_84.png ViennaRNA-2.5.0/doc/html/form_105.png ViennaRNA-2.5.0/doc/html/dist__vars_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/part__func__up_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/strings_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/ali__plex_8h_source.html ViennaRNA-2.5.0/doc/html/group__ligand__binding.map ViennaRNA-2.5.0/doc/html/part__func__up_8h__incl.md5 ViennaRNA-2.5.0/doc/html/MEA_8h.html ViennaRNA-2.5.0/doc/html/utilities.html ViennaRNA-2.5.0/doc/html/io_2file__formats__msa_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/duplex_8h__incl.md5 ViennaRNA-2.5.0/doc/html/plotting_2structures_8h__incl.md5 ViennaRNA-2.5.0/doc/html/group__message__utils.svg ViennaRNA-2.5.0/doc/html/utils_2basic_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/dir_3d74ce004720553e7871f65d12e07ff9.js ViennaRNA-2.5.0/doc/html/form_64.png ViennaRNA-2.5.0/doc/html/landscape_2findpath_8h_source.html ViennaRNA-2.5.0/doc/html/group__cofold.md5 ViennaRNA-2.5.0/doc/html/group__subopt__wuchty.md5 ViennaRNA-2.5.0/doc/html/hard_8h__incl.map ViennaRNA-2.5.0/doc/html/all_8h__incl.md5 ViennaRNA-2.5.0/doc/html/loop__energies_8h__incl.md5 ViennaRNA-2.5.0/doc/html/io_2utils_8h.js ViennaRNA-2.5.0/doc/html/probabilities_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/structvrna__fc__s__coll__graph.svg ViennaRNA-2.5.0/doc/html/group__constraints.svg ViennaRNA-2.5.0/doc/html/hairpin_8h__incl.svg ViennaRNA-2.5.0/doc/html/group__struct__utils__tree.map ViennaRNA-2.5.0/doc/html/utils_8h__incl.md5 ViennaRNA-2.5.0/doc/html/dir_1ddf03e95848b6488d60454f7a385ded_dep.svg ViennaRNA-2.5.0/doc/html/group__centroid__fold.html ViennaRNA-2.5.0/doc/html/BoyerMoore_8h_source.html ViennaRNA-2.5.0/doc/html/structured__domains_8h.html ViennaRNA-2.5.0/doc/html/params_2basic_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/group__SHAPE__reactivities.map ViennaRNA-2.5.0/doc/html/neighbor_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/group__eval__deprecated.svg ViennaRNA-2.5.0/doc/html/group__file__formats__msa_org.svg ViennaRNA-2.5.0/doc/html/dp__matrices_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/probabilities_8h__incl.md5 ViennaRNA-2.5.0/doc/html/boltzmann__sampling_8h__incl.md5 ViennaRNA-2.5.0/doc/html/datastructures_2stream__output_8h.html ViennaRNA-2.5.0/doc/html/group__file__formats.md5 ViennaRNA-2.5.0/doc/html/grammar_8h__incl.map ViennaRNA-2.5.0/doc/html/dir_3d74ce004720553e7871f65d12e07ff9.html ViennaRNA-2.5.0/doc/html/group__combinatorics__utils.html ViennaRNA-2.5.0/doc/html/structvrna__dimer__conc__s.html ViennaRNA-2.5.0/doc/html/svm__utils_8h__incl.md5 ViennaRNA-2.5.0/doc/html/globals_func_d.html ViennaRNA-2.5.0/doc/html/form_13.png ViennaRNA-2.5.0/doc/html/group__data__structures_structpu__out.js ViennaRNA-2.5.0/doc/html/helloworld.html ViennaRNA-2.5.0/doc/html/form_95.png ViennaRNA-2.5.0/doc/html/form_151.png ViennaRNA-2.5.0/doc/html/landscape_2neighbor_8h.html ViennaRNA-2.5.0/doc/html/group__cofold.js ViennaRNA-2.5.0/doc/html/heat__capacity_8h__incl.svg ViennaRNA-2.5.0/doc/html/form_112.png ViennaRNA-2.5.0/doc/html/group__file__formats__msa.html ViennaRNA-2.5.0/doc/html/form_178.png ViennaRNA-2.5.0/doc/html/fold__vars_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/group__landscape.js ViennaRNA-2.5.0/doc/html/group__eval.md5 ViennaRNA-2.5.0/doc/html/pk__plex_8h__incl.map ViennaRNA-2.5.0/doc/html/walk_8h_source.html ViennaRNA-2.5.0/doc/html/form_155.png ViennaRNA-2.5.0/doc/html/structvrna__fc__s__coll__graph.md5 ViennaRNA-2.5.0/doc/html/char__stream_8h_source.html ViennaRNA-2.5.0/doc/html/form_185.png ViennaRNA-2.5.0/doc/html/convert_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/ligand_8h__incl.map ViennaRNA-2.5.0/doc/html/group__perturbation.js ViennaRNA-2.5.0/doc/html/loop_decomposition.png ViennaRNA-2.5.0/doc/html/group__paths__walk.html ViennaRNA-2.5.0/doc/html/model_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/dp__matrices_8h.js ViennaRNA-2.5.0/doc/html/group__struct__utils__wuss.svg ViennaRNA-2.5.0/doc/html/form_52.png ViennaRNA-2.5.0/doc/html/duplex_8h__incl.map ViennaRNA-2.5.0/doc/html/dir_000008_000010.html ViennaRNA-2.5.0/doc/html/form_26.png ViennaRNA-2.5.0/doc/html/functions_vars_r.html ViennaRNA-2.5.0/doc/html/group__hash__table__utils_structvrna__ht__entry__db__t.js ViennaRNA-2.5.0/doc/html/globals_w.html ViennaRNA-2.5.0/doc/html/stream__output_8h.html ViennaRNA-2.5.0/doc/html/strings_8h__incl.svg ViennaRNA-2.5.0/doc/html/form_3.png ViennaRNA-2.5.0/doc/html/group__eval__deprecated.map ViennaRNA-2.5.0/doc/html/dir_3d74ce004720553e7871f65d12e07ff9_dep.svg ViennaRNA-2.5.0/doc/html/landscape_2walk_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/group__constraints.html ViennaRNA-2.5.0/doc/html/functions_vars_k.html ViennaRNA-2.5.0/doc/html/structTwoDpfold__vars.js ViennaRNA-2.5.0/doc/html/globals_func_c.html ViennaRNA-2.5.0/doc/html/structvrna__param__s__coll__graph.md5 ViennaRNA-2.5.0/doc/html/form_161.png ViennaRNA-2.5.0/doc/html/decomp_ml.svg ViennaRNA-2.5.0/doc/html/file__formats_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/fold__compound_8h__incl.map ViennaRNA-2.5.0/doc/html/profiledist_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/utils_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/constraints_8h_source.html ViennaRNA-2.5.0/doc/html/unstructured__domains_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/md_CONTRIBUTING.html ViennaRNA-2.5.0/doc/html/group__struct__utils__deprecated.map ViennaRNA-2.5.0/doc/html/form_190.png ViennaRNA-2.5.0/doc/html/dir_1ca6f3a46323f79e1934000abf5d4efb_dep.svg ViennaRNA-2.5.0/doc/html/hairpin_8h_source.html ViennaRNA-2.5.0/doc/html/structLIST.html ViennaRNA-2.5.0/doc/html/SHAPE_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/utils_2structures_8h.js ViennaRNA-2.5.0/doc/html/concentrations_8h_source.html ViennaRNA-2.5.0/doc/html/landscape_2findpath_8h.html ViennaRNA-2.5.0/doc/html/group__subopt__wuchty.js ViennaRNA-2.5.0/doc/html/form_139.png ViennaRNA-2.5.0/doc/html/hash__tables_8h.html ViennaRNA-2.5.0/doc/html/group__hash__table__utils.md5 ViennaRNA-2.5.0/doc/html/decomp_ext_ext_ext.svg ViennaRNA-2.5.0/doc/html/group__struct__utils__plist.js ViennaRNA-2.5.0/doc/html/all_8h.html ViennaRNA-2.5.0/doc/html/params_8h.html ViennaRNA-2.5.0/doc/html/concentrations_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/group__kl__neighborhood__mfe.map ViennaRNA-2.5.0/doc/html/plotting_2structures_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/form_134.png ViennaRNA-2.5.0/doc/html/structvrna__dotplot__auxdata__t__coll__graph.svg ViennaRNA-2.5.0/doc/html/functions_vars_e.html ViennaRNA-2.5.0/doc/html/read__epars_8h__incl.md5 ViennaRNA-2.5.0/doc/html/LPfold_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/local_vs_global.html ViennaRNA-2.5.0/doc/html/mfe__window_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/graph_legend.md5 ViennaRNA-2.5.0/doc/html/params_2basic_8h__incl.svg ViennaRNA-2.5.0/doc/html/form_56.png ViennaRNA-2.5.0/doc/html/group__struct__utils__helix__list.html ViennaRNA-2.5.0/doc/html/globals_s.html ViennaRNA-2.5.0/doc/html/dir_000003_000006.html ViennaRNA-2.5.0/doc/html/structure__utils_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/fold__compound_8h_source.html ViennaRNA-2.5.0/doc/html/group__soft__constraints_structvrna__sc__s.js ViennaRNA-2.5.0/doc/html/group__kl__neighborhood__stochbt.map ViennaRNA-2.5.0/doc/html/decomp_ml_stem.svg ViennaRNA-2.5.0/doc/html/Lfold_8h__incl.md5 ViennaRNA-2.5.0/doc/html/globals_type.html ViennaRNA-2.5.0/doc/html/group__eval__deprecated.js ViennaRNA-2.5.0/doc/html/part__func__co_8h__incl.map ViennaRNA-2.5.0/doc/html/mfe_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/MEA_8h__incl.md5 ViennaRNA-2.5.0/doc/html/2Dfold_8h_source.html ViennaRNA-2.5.0/doc/html/group__file__utils.svg ViennaRNA-2.5.0/doc/html/mm_8h__incl.svg ViennaRNA-2.5.0/doc/html/datastructures_2stream__output_8h_source.html ViennaRNA-2.5.0/doc/html/plotting_2alignments_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/functions_h.html ViennaRNA-2.5.0/doc/html/globals_func_u.html ViennaRNA-2.5.0/doc/html/group__subopt__stochbt.svg ViennaRNA-2.5.0/doc/html/utils_2basic_8h__dep__incl_org.svg ViennaRNA-2.5.0/doc/html/group__plotting__utils.map ViennaRNA-2.5.0/doc/html/boltzmann__sampling_8h__incl.svg ViennaRNA-2.5.0/doc/html/group__part__func__global.md5 ViennaRNA-2.5.0/doc/html/functions_vars_f.html ViennaRNA-2.5.0/doc/html/group__file__formats__msa.svg ViennaRNA-2.5.0/doc/html/group__eval__loops__int.map ViennaRNA-2.5.0/doc/html/group__file__utils.js ViennaRNA-2.5.0/doc/html/stream__output_8h__incl.svg ViennaRNA-2.5.0/doc/html/datastructures_2basic_8h__incl.md5 ViennaRNA-2.5.0/doc/html/gquad_8h.html ViennaRNA-2.5.0/doc/html/group__data__structures_structinteract.js ViennaRNA-2.5.0/doc/html/naview_8h.html ViennaRNA-2.5.0/doc/html/strings_8h_source.html ViennaRNA-2.5.0/doc/html/stream__output_8h__incl.map ViennaRNA-2.5.0/doc/html/form_128.png ViennaRNA-2.5.0/doc/html/mfe__multifold_8h_source.html ViennaRNA-2.5.0/doc/html/LPfold_8h__incl.svg ViennaRNA-2.5.0/doc/html/group__subopt__zuker.map ViennaRNA-2.5.0/doc/html/group__energy__parameters_structvrna__exp__param__s.js ViennaRNA-2.5.0/doc/html/fold__compound_8h__dep__incl_org.svg ViennaRNA-2.5.0/doc/html/form_141.png ViennaRNA-2.5.0/doc/html/group__kl__neighborhood__pf.svg ViennaRNA-2.5.0/doc/html/form_66.png ViennaRNA-2.5.0/doc/html/dp__matrices_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/functions_vars_s.html ViennaRNA-2.5.0/doc/html/globals.html ViennaRNA-2.5.0/doc/html/loop__energies_8h_source.html ViennaRNA-2.5.0/doc/html/Lfold_8h_source.html ViennaRNA-2.5.0/doc/html/all_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/form_57.png ViennaRNA-2.5.0/doc/html/group__string__utils.svg ViennaRNA-2.5.0/doc/html/structTree__coll__graph.md5 ViennaRNA-2.5.0/doc/html/io_2file__formats_8h__incl.svg ViennaRNA-2.5.0/doc/html/jquery.js ViennaRNA-2.5.0/doc/html/globals_func_o.html ViennaRNA-2.5.0/doc/html/mfe_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/LPfold_8h_source.html ViennaRNA-2.5.0/doc/html/decomp_ext_ext.svg ViennaRNA-2.5.0/doc/html/globals_p.html ViennaRNA-2.5.0/doc/html/api_features.js ViennaRNA-2.5.0/doc/html/pk__plex_8h.js ViennaRNA-2.5.0/doc/html/group__struct__utils__abstract__shapes.js ViennaRNA-2.5.0/doc/html/group__energy__parameters__convert.map ViennaRNA-2.5.0/doc/html/form_63.png ViennaRNA-2.5.0/doc/html/structvrna__data__linear__s__coll__graph.map ViennaRNA-2.5.0/doc/html/svm__utils_8h__incl.svg ViennaRNA-2.5.0/doc/html/group__class__fold.md5 ViennaRNA-2.5.0/doc/html/form_188.png ViennaRNA-2.5.0/doc/html/findpath_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/datastructures_2stream__output_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/form_191.png ViennaRNA-2.5.0/doc/html/group__mfe__backtracking.md5 ViennaRNA-2.5.0/doc/html/move_8h.html ViennaRNA-2.5.0/doc/html/functions_q.html ViennaRNA-2.5.0/doc/html/decomp_ext_stem.svg ViennaRNA-2.5.0/doc/html/structTwoDpfold__vars__coll__graph.map ViennaRNA-2.5.0/doc/html/group__grammar.md5 ViennaRNA-2.5.0/doc/html/constraints_2basic_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/sync_on.png ViennaRNA-2.5.0/doc/html/functions_vars_m.html ViennaRNA-2.5.0/doc/html/string__utils_8h__incl.md5 ViennaRNA-2.5.0/doc/html/group__eval__loops__ext.md5 ViennaRNA-2.5.0/doc/html/md_CHANGELOG.html ViennaRNA-2.5.0/doc/html/globals_func_x.html ViennaRNA-2.5.0/doc/html/group__aln__utils.html ViennaRNA-2.5.0/doc/html/multibranch__loops_8h_source.html ViennaRNA-2.5.0/doc/html/fold__compound_8h__dep__incl.map ViennaRNA-2.5.0/doc/html/form_99.png ViennaRNA-2.5.0/doc/html/constraints__SHAPE_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/structvrna__sc__s__coll__graph.md5 ViennaRNA-2.5.0/doc/html/group__pf__cofold.map ViennaRNA-2.5.0/doc/html/group__data__structures_structpu__contrib.js ViennaRNA-2.5.0/doc/html/2Dpfold_8h__incl.map ViennaRNA-2.5.0/doc/html/layouts_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/utils_8h_source.html ViennaRNA-2.5.0/doc/html/group__struct__utils__pair__table.svg ViennaRNA-2.5.0/doc/html/plotting_2utils_8h.js ViennaRNA-2.5.0/doc/html/form_189.png ViennaRNA-2.5.0/doc/html/functions_vars_l.html ViennaRNA-2.5.0/doc/html/plotting_2naview_8h_source.html ViennaRNA-2.5.0/doc/html/landscape_2findpath_8h__dep__incl.svg ViennaRNA-2.5.0/doc/html/part__func__up_8h__incl.svg ViennaRNA-2.5.0/doc/html/fold__vars_8h__incl_org.svg ViennaRNA-2.5.0/doc/html/external_8h__dep__incl.md5 ViennaRNA-2.5.0/doc/html/heap_8h_source.html ViennaRNA-2.5.0/doc/html/group__eval__loops.svg ViennaRNA-2.5.0/doc/DoxygenLayout.xml ViennaRNA-2.5.0/NEWS ViennaRNA-2.5.0/CHANGELOG.md ViennaRNA-2.5.0/COPYING ViennaRNA-2.5.0/license.txt ViennaRNA-2.5.0/aclocal.m4 ViennaRNA-2.5.0/THANKS ViennaRNA-2.5.0/m4/ ViennaRNA-2.5.0/m4/ax_cxx_compile_stdcxx.m4 ViennaRNA-2.5.0/m4/ac_rna_build_requirements.m4 ViennaRNA-2.5.0/m4/ac_rna_features.m4 ViennaRNA-2.5.0/m4/ac_rna_unit_tests.m4 ViennaRNA-2.5.0/m4/ac_rna_latex.m4 ViennaRNA-2.5.0/m4/ax_check_link_flag.m4 ViennaRNA-2.5.0/m4/ax_pkg_swig.m4 ViennaRNA-2.5.0/m4/ac_rna_tutorial.m4 ViennaRNA-2.5.0/m4/ac_rna_lto.m4 ViennaRNA-2.5.0/m4/libtool.m4 ViennaRNA-2.5.0/m4/ax_check_compile_flag.m4 ViennaRNA-2.5.0/m4/ac_rna_osx.m4 ViennaRNA-2.5.0/m4/ac_rna.m4 ViennaRNA-2.5.0/m4/ax_append_flag.m4 ViennaRNA-2.5.0/m4/ax_compiler_vendor.m4 ViennaRNA-2.5.0/m4/ax_perl_ext.m4 ViennaRNA-2.5.0/m4/ax_python3_devel.m4 ViennaRNA-2.5.0/m4/ac_rna_swig.m4 ViennaRNA-2.5.0/m4/ac_rna_colorize.m4 ViennaRNA-2.5.0/m4/ltversion.m4 ViennaRNA-2.5.0/m4/ax_require_defined.m4 ViennaRNA-2.5.0/m4/ac_rna_refman.m4 ViennaRNA-2.5.0/m4/ax_pthread.m4 ViennaRNA-2.5.0/m4/lt~obsolete.m4 ViennaRNA-2.5.0/m4/ax_openmp.m4 ViennaRNA-2.5.0/m4/ltoptions.m4 ViennaRNA-2.5.0/m4/ac_rna_cla.m4 ViennaRNA-2.5.0/m4/ac_rna_subpackages.m4 ViennaRNA-2.5.0/m4/ltsugar.m4 ViennaRNA-2.5.0/m4/ax_python2_devel.m4 ViennaRNA-2.5.0/m4/ac_rna_macros.m4 ViennaRNA-2.5.0/man/ ViennaRNA-2.5.0/man/Makefile.am ViennaRNA-2.5.0/man/RNAfold.1 ViennaRNA-2.5.0/man/RNAinverse.1 ViennaRNA-2.5.0/man/RNAup.1 ViennaRNA-2.5.0/man/RNAalifold.1 ViennaRNA-2.5.0/man/RNAlib.info ViennaRNA-2.5.0/man/ct2db.1 ViennaRNA-2.5.0/man/RNAdos.1 ViennaRNA-2.5.0/man/RNA2Dfold.1 ViennaRNA-2.5.0/man/RNAplot.1 ViennaRNA-2.5.0/man/RNAdistance.1 ViennaRNA-2.5.0/man/RNAmultifold.1 ViennaRNA-2.5.0/man/RNAaliduplex.1 ViennaRNA-2.5.0/man/RNApdist.1 ViennaRNA-2.5.0/man/RNAplfold.1 ViennaRNA-2.5.0/man/Makefile.in ViennaRNA-2.5.0/man/RNAsubopt.1 ViennaRNA-2.5.0/man/RNAduplex.1 ViennaRNA-2.5.0/man/RNAsnoop.1 ViennaRNA-2.5.0/man/RNApaln.1 ViennaRNA-2.5.0/man/cmdlopt.sh.in ViennaRNA-2.5.0/man/RNALalifold.1 ViennaRNA-2.5.0/man/include/ ViennaRNA-2.5.0/man/include/RNAinverse.inc ViennaRNA-2.5.0/man/include/RNAheat.inc ViennaRNA-2.5.0/man/include/RNALalifold.inc ViennaRNA-2.5.0/man/include/RNAdos.inc ViennaRNA-2.5.0/man/include/RNAeval.inc ViennaRNA-2.5.0/man/include/RNAcofold.inc ViennaRNA-2.5.0/man/include/RNAplfold.inc ViennaRNA-2.5.0/man/include/ref_energy_par.inc ViennaRNA-2.5.0/man/include/ref_package.inc ViennaRNA-2.5.0/man/include/RNAaliduplex.inc ViennaRNA-2.5.0/man/include/RNAup.inc ViennaRNA-2.5.0/man/include/RNAPKplex.inc ViennaRNA-2.5.0/man/include/RNApdist.inc ViennaRNA-2.5.0/man/include/RNA2Dfold.inc ViennaRNA-2.5.0/man/include/RNAdistance.inc ViennaRNA-2.5.0/man/include/RNAalifold.inc ViennaRNA-2.5.0/man/include/RNApaln.inc ViennaRNA-2.5.0/man/include/RNAsnoop.inc ViennaRNA-2.5.0/man/include/RNAplot.inc ViennaRNA-2.5.0/man/include/RNAparconv.inc ViennaRNA-2.5.0/man/include/RNAfold.inc ViennaRNA-2.5.0/man/include/RNALfold.inc ViennaRNA-2.5.0/man/include/RNApvmin.inc ViennaRNA-2.5.0/man/include/RNAsubopt.inc ViennaRNA-2.5.0/man/include/RNAplex.inc ViennaRNA-2.5.0/man/include/RNAduplex.inc ViennaRNA-2.5.0/man/RNAlib.texi ViennaRNA-2.5.0/man/RNAcofold.1 ViennaRNA-2.5.0/man/RNAparconv.1 ViennaRNA-2.5.0/man/RNAheat.1 ViennaRNA-2.5.0/man/RNAPKplex.1 ViennaRNA-2.5.0/man/RNAplex.1 ViennaRNA-2.5.0/man/RNAeval.1 ViennaRNA-2.5.0/man/RNApvmin.1 ViennaRNA-2.5.0/man/RNALfold.1 ViennaRNA-2.5.0/misc/ ViennaRNA-2.5.0/misc/Makefile.am ViennaRNA-2.5.0/misc/2Dlandscape_pf.gri ViennaRNA-2.5.0/misc/rna_turner1999.par ViennaRNA-2.5.0/misc/Makefile.in ViennaRNA-2.5.0/misc/parameter_files.txt ViennaRNA-2.5.0/misc/rna_turner2004.par ViennaRNA-2.5.0/misc/rna_misc_special_hairpins.par ViennaRNA-2.5.0/misc/2Dlandscape.R ViennaRNA-2.5.0/misc/2Dlandscape_mfe.gri ViennaRNA-2.5.0/misc/dna_mathews2004.par ViennaRNA-2.5.0/misc/rna_andronescu2007.par ViennaRNA-2.5.0/misc/rna_langdon2018.par ViennaRNA-2.5.0/misc/dna_mathews1999.par ViennaRNA-2.5.0/Makefile.in ViennaRNA-2.5.0/configure.ac ViennaRNA-2.5.0/INSTALL ViennaRNA-2.5.0/RNAlib2.pc.in ViennaRNA-2.5.0/config/ ViennaRNA-2.5.0/config/tap-driver.sh ViennaRNA-2.5.0/config/ltmain.sh ViennaRNA-2.5.0/config/config.sub ViennaRNA-2.5.0/config/config.guess ViennaRNA-2.5.0/config/ar-lib ViennaRNA-2.5.0/config/missing ViennaRNA-2.5.0/config/install-sh ViennaRNA-2.5.0/config/depcomp ViennaRNA-2.5.0/config/texinfo.tex ViennaRNA-2.5.0/config/compile ViennaRNA-2.5.0/tests/ ViennaRNA-2.5.0/tests/Makefile.am ViennaRNA-2.5.0/tests/utils.c ViennaRNA-2.5.0/tests/RNAfold/ ViennaRNA-2.5.0/tests/RNAfold/partfunc ViennaRNA-2.5.0/tests/RNAfold/results/ ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0026_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_gquad_test_0011_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0015_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0008_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0040_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0024_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0024_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0023_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0018_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0003_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0043_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0040_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_gquad_test_0005_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0016_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0014_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0017_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0021_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.SHAPE.TPP_riboswitch_E.coli.Z.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_gquad_test_0012_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.SHAPE.TPP_riboswitch_E.coli.D.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.small.span30.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0013_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0045_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0027_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0010_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0020_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_gquad_test_0004_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0016_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0038_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0036_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0036_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0001_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0016_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.small.id.mfe.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0020_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0035_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.SHAPE.Lysine_riboswitch_T._martima.Z.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0021_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0027_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.SHAPE.5domain16S_rRNA_H.volcanii.W.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.small.rna_turner1999.par.mfe.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.fasta.mfe.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0032_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.SHAPE.Lysine_riboswitch_T._martima.D.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0006_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0050_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_gquad_test_0018_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0028_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0022_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0013_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0029_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.small.circ.hc.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0048_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0002_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0005_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0002_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.small.noLP.mfe.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0042_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0038_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0031_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.SHAPE.5domain16S_rRNA_H.volcanii.Z.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0047_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0017_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0044_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0014_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.small.d1.mfe.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0018_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0041_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0023_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0042_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.SHAPE.5domain16S_rRNA_H.volcanii.D.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0039_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.SHAPE.TPP_riboswitch_E.coli.W.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0038_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0013_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0049_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0004_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.small.d3.mfe.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0027_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0009_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0009_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0008_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_gquad_test_0010_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0026_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0012_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.gquad.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0010_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0050_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0034_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_gquad_test_0019_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_gquad_test_0003_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0028_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0006_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.small.cmds.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.small.T25.mfe.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0039_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0039_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0007_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0019_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0049_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0048_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0001_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0032_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0005_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.small.rna_andronescu2007.par.mfe.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0046_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0033_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0041_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0029_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_gquad_test_0001_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0048_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0044_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0030_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0035_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0028_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_gquad_test_0017_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0010_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0032_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_gquad_test_0013_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0045_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_gquad_test_0006_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0046_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0011_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_gquad_test_0009_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0047_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0033_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0043_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0011_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_gquad_test_0007_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0034_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_gquad_test_0014_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0015_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0037_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0044_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0019_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0037_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0022_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.theo.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0034_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0009_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0025_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0035_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0025_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0020_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0004_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0014_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0019_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0003_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_gquad_test_0002_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_gquad_test_0016_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0031_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0050_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_gquad_test_0015_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0040_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0042_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0033_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.small.d2.mfe.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0025_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.SHAPE.5domain16S_rRNA_E.coli.D.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.small.dna_mathews1999.par.mfe.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0047_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.small.d0.mfe.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0030_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.SHAPE.5domain16S_rRNA_E.coli.Z.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.SHAPE.Lysine_riboswitch_T._martima.W.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.small.T40.mfe.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0026_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0012_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0006_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0037_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0015_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0005_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.small.dna_mathews2004.par.mfe.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0023_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0008_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0022_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.small.pf.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0046_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_theo_test_0001_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.seq.mfe.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0007_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0002_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0036_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0003_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_gquad_test_0008_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0017_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0018_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0030_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_gquad_test_0020_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0012_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0007_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0001_dp2.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0029_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.small.circ.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0011_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0043_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0041_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold.SHAPE.5domain16S_rRNA_E.coli.W.gold ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0021_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0049_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0031_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_cmd_test_0045_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0024_dp.ps ViennaRNA-2.5.0/tests/RNAfold/results/rnafold_pf_test_0004_dp.ps ViennaRNA-2.5.0/tests/RNAfold/special ViennaRNA-2.5.0/tests/RNAfold/general ViennaRNA-2.5.0/tests/RNAfold/long ViennaRNA-2.5.0/tests/RNApath.py.in ViennaRNA-2.5.0/tests/RNAalifold/ ViennaRNA-2.5.0/tests/RNAalifold/partfunc ViennaRNA-2.5.0/tests/RNAalifold/results/ ViennaRNA-2.5.0/tests/RNAalifold/results/rfam_seed_selected.T25.mfe.gold ViennaRNA-2.5.0/tests/RNAalifold/results/rnaalifold.SHAPE.gold ViennaRNA-2.5.0/tests/RNAalifold/results/alignment_stockholm.stk.mfe.gold ViennaRNA-2.5.0/tests/RNAalifold/results/rfam_seed_selected.dna_mathews1999.par.mfe.gold ViennaRNA-2.5.0/tests/RNAalifold/results/rfam_seed_selected.rna_turner1999.par.mfe.gold ViennaRNA-2.5.0/tests/RNAalifold/results/rfam_seed_selected.ribosum.mfe.gold ViennaRNA-2.5.0/tests/RNAalifold/results/rfam_seed_selected.T40.mfe.gold ViennaRNA-2.5.0/tests/RNAalifold/results/rfam_seed_selected.dna_mathews2004.par.mfe.gold ViennaRNA-2.5.0/tests/RNAalifold/results/rfam_seed_selected.pf.gold ViennaRNA-2.5.0/tests/RNAalifold/results/rnaalifold_pf_test_0004_dp.ps ViennaRNA-2.5.0/tests/RNAalifold/results/rfam_seed_selected.span30.gold ViennaRNA-2.5.0/tests/RNAalifold/results/alignment_clustal.aln.mfe.gold ViennaRNA-2.5.0/tests/RNAalifold/results/rfam_seed_selected.rna_andronescu2007.par.mfe.gold ViennaRNA-2.5.0/tests/RNAalifold/results/rfam_seed_selected.noLP.mfe.gold ViennaRNA-2.5.0/tests/RNAalifold/results/rnaalifold_pf_test_0002_ali.out ViennaRNA-2.5.0/tests/RNAalifold/results/alignment_fasta.fa.mfe.gold ViennaRNA-2.5.0/tests/RNAalifold/results/rnaalifold_pf_test_0004_ali.out ViennaRNA-2.5.0/tests/RNAalifold/results/rnaalifold_pf_test_0001_dp.ps ViennaRNA-2.5.0/tests/RNAalifold/results/rnaalifold_pf_test_0002_dp.ps ViennaRNA-2.5.0/tests/RNAalifold/results/alignment_maf.maf.mfe.gold ViennaRNA-2.5.0/tests/RNAalifold/results/rfam_seed_many_short.d2.mfe.gold ViennaRNA-2.5.0/tests/RNAalifold/results/rnaalifold.gquad.gold ViennaRNA-2.5.0/tests/RNAalifold/results/rnaalifold_pf_test_0003_dp.ps ViennaRNA-2.5.0/tests/RNAalifold/results/rnaalifold_pf_test_0003_ali.out ViennaRNA-2.5.0/tests/RNAalifold/results/rnaalifold_pf_test_0001_ali.out ViennaRNA-2.5.0/tests/RNAalifold/results/rfam_seed_selected.id.mfe.gold ViennaRNA-2.5.0/tests/RNAalifold/results/rfam_seed_many_short.d0.mfe.gold ViennaRNA-2.5.0/tests/RNAalifold/results/rfam_seed_many_short.circ.gold ViennaRNA-2.5.0/tests/RNAalifold/special ViennaRNA-2.5.0/tests/RNAalifold/general ViennaRNA-2.5.0/tests/test-env.sh.in ViennaRNA-2.5.0/tests/ensemble_defect.c ViennaRNA-2.5.0/tests/ensemble_defect.ts ViennaRNA-2.5.0/tests/python/ ViennaRNA-2.5.0/tests/python/test-RNA-combinatorics.py ViennaRNA-2.5.0/tests/python/test-RNA-ensemble_defect.py ViennaRNA-2.5.0/tests/python/test-RNA-utils.py ViennaRNA-2.5.0/tests/python/test-RNA-mfe_eval.py ViennaRNA-2.5.0/tests/python/test-RNA-constraints-soft.py ViennaRNA-2.5.0/tests/python/test-RNA-constraints-SHAPE.py ViennaRNA-2.5.0/tests/python/test-RNA.py ViennaRNA-2.5.0/tests/python/test-RNA-sc-callbacks.py ViennaRNA-2.5.0/tests/python/test-RNA-file-formats.py ViennaRNA-2.5.0/tests/python/test-RNA-pf_window.py ViennaRNA-2.5.0/tests/python/test-RNA-constraints-special.py ViennaRNA-2.5.0/tests/python/test-RNA-mfe_window.py ViennaRNA-2.5.0/tests/python/test-RNA-boltzmann-sampling.py ViennaRNA-2.5.0/tests/python/test-RNA-constraints.py ViennaRNA-2.5.0/tests/python/test-RNA-subopt.py ViennaRNA-2.5.0/tests/walk.c ViennaRNA-2.5.0/tests/hash_table.ts ViennaRNA-2.5.0/tests/perl5/ ViennaRNA-2.5.0/tests/perl5/test-RNA-pf_window.pl ViennaRNA-2.5.0/tests/perl5/test-RNA-ensemble_defect.pl ViennaRNA-2.5.0/tests/perl5/test-RNA-mfe_eval.pl ViennaRNA-2.5.0/tests/perl5/test-RNA-callbacks.pl ViennaRNA-2.5.0/tests/perl5/test-RNA-file-formats.pl ViennaRNA-2.5.0/tests/perl5/test-RNA.pl ViennaRNA-2.5.0/tests/perl5/test-RNA-constraints-soft.pl ViennaRNA-2.5.0/tests/perl5/test-RNA-combinatorics.pl ViennaRNA-2.5.0/tests/perl5/test-RNA-Design.t ViennaRNA-2.5.0/tests/perl5/test-RNA-mfe_window.pl ViennaRNA-2.5.0/tests/perl5/test-RNA-constraints-special.pl ViennaRNA-2.5.0/tests/perl5/test-RNA-constraints-SHAPE.pl ViennaRNA-2.5.0/tests/perl5/test-RNA-boltzmann-sampling.pl ViennaRNA-2.5.0/tests/perl5/test-RNA-constraints.pl ViennaRNA-2.5.0/tests/utils.ts ViennaRNA-2.5.0/tests/constraints.c ViennaRNA-2.5.0/tests/Makefile.in ViennaRNA-2.5.0/tests/python2/ ViennaRNA-2.5.0/tests/python2/test-RNA-sc-callbacks.py2 ViennaRNA-2.5.0/tests/python2/test-RNA-constraints-SHAPE.py2 ViennaRNA-2.5.0/tests/python2/test-RNA-utils.py2 ViennaRNA-2.5.0/tests/python2/test-RNA-constraints-soft.py2 ViennaRNA-2.5.0/tests/python2/test-RNA-mfe_window.py2 ViennaRNA-2.5.0/tests/python2/test-RNA-constraints-special.py2 ViennaRNA-2.5.0/tests/python2/test-RNA-combinatorics.py2 ViennaRNA-2.5.0/tests/python2/test-RNA-pf_window.py2 ViennaRNA-2.5.0/tests/python2/test-RNA-mfe_eval.py2 ViennaRNA-2.5.0/tests/python2/test-RNA-file-formats.py2 ViennaRNA-2.5.0/tests/python2/test-RNA.py2 ViennaRNA-2.5.0/tests/python2/test-RNA-ensemble_defect.py2 ViennaRNA-2.5.0/tests/python2/test-RNA-constraints.py2 ViennaRNA-2.5.0/tests/python2/test-RNA-boltzmann-sampling.py2 ViennaRNA-2.5.0/tests/python2/test-RNA-subopt.py2 ViennaRNA-2.5.0/tests/RNAHelpers.pm.in ViennaRNA-2.5.0/tests/data/ ViennaRNA-2.5.0/tests/data/5domain16S_rRNA_H.volcanii.shape_2rows ViennaRNA-2.5.0/tests/data/rnacofold.small.seq ViennaRNA-2.5.0/tests/data/ebag9_5utr.aln ViennaRNA-2.5.0/tests/data/ecoli_16S_1m7.shape ViennaRNA-2.5.0/tests/data/rnafold.small.seq ViennaRNA-2.5.0/tests/data/output_test.txt ViennaRNA-2.5.0/tests/data/adam10_5utr.aln ViennaRNA-2.5.0/tests/data/Lysine_riboswitch_T._martima.pvmin ViennaRNA-2.5.0/tests/data/TPP_riboswitch_E.coli.shape_2rows ViennaRNA-2.5.0/tests/data/TPP_riboswitch_E.coli.db ViennaRNA-2.5.0/tests/data/rnafold.seq ViennaRNA-2.5.0/tests/data/alignment_maf.maf ViennaRNA-2.5.0/tests/data/5domain16S_rRNA_H.volcanii.db ViennaRNA-2.5.0/tests/data/070313_ecoli_cdiff_16S_clustalw.aln ViennaRNA-2.5.0/tests/data/rnafold_sc_lift.cmds ViennaRNA-2.5.0/tests/data/sc.txt ViennaRNA-2.5.0/tests/data/TPP_riboswitch_E.coli.pvmin ViennaRNA-2.5.0/tests/data/cdiff_16S_1m7.shape ViennaRNA-2.5.0/tests/data/hc.txt ViennaRNA-2.5.0/tests/data/Lysine_riboswitch_T._martima.db ViennaRNA-2.5.0/tests/data/rnafold.fasta ViennaRNA-2.5.0/tests/data/5domain16S_rRNA_H.volcanii.pvmin ViennaRNA-2.5.0/tests/data/alignment_clustal.aln ViennaRNA-2.5.0/tests/data/5domain16S_rRNA_E.coli.shape_2rows ViennaRNA-2.5.0/tests/data/Lysine_riboswitch_T._martima.shape_2rows ViennaRNA-2.5.0/tests/data/rnafold.cmds ViennaRNA-2.5.0/tests/data/alignment_stockholm.stk ViennaRNA-2.5.0/tests/data/rnafold_hc.cmds ViennaRNA-2.5.0/tests/data/ncam2_5utr.aln ViennaRNA-2.5.0/tests/data/rfam_seed_selected.stk ViennaRNA-2.5.0/tests/data/alignment_fasta.fa ViennaRNA-2.5.0/tests/data/070313_ecoli_cdiff_16S_fasta.aln ViennaRNA-2.5.0/tests/data/rnacofold.concentrations ViennaRNA-2.5.0/tests/data/5domain16S_rRNA_E.coli.db ViennaRNA-2.5.0/tests/data/rnafold.theo.fa ViennaRNA-2.5.0/tests/data/test.maf ViennaRNA-2.5.0/tests/data/crem_5utr.aln ViennaRNA-2.5.0/tests/data/rfam_seed_many_short.stk ViennaRNA-2.5.0/tests/data/bcl-2_5utr.aln ViennaRNA-2.5.0/tests/data/5domain16S_rRNA_E.coli.pvmin ViennaRNA-2.5.0/tests/data/rnafold.gquad.fa ViennaRNA-2.5.0/tests/constraints_soft.ts ViennaRNA-2.5.0/tests/energy_evaluation.ts ViennaRNA-2.5.0/tests/energy_evaluation.c ViennaRNA-2.5.0/tests/walk.ts ViennaRNA-2.5.0/tests/eval_structure.ts ViennaRNA-2.5.0/tests/fold.c ViennaRNA-2.5.0/tests/RNAcofold/ ViennaRNA-2.5.0/tests/RNAcofold/partfunc ViennaRNA-2.5.0/tests/RNAcofold/results/ ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0019_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0049_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0047_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0014_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0029_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0039_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0001_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0003_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0003_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0019_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0018_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0038_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0002_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/rnacofold.small.id.mfe.gold ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0019_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0029_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0050_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0035_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0021_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0046_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0016_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0008_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0007_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0035_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0043_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0023_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0040_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0041_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0015_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0021_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0031_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0038_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0021_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0050_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0032_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0047_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0042_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0039_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0011_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0025_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0035_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0014_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0039_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0017_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0011_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0036_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0007_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0041_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0037_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0001_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/rnacofold.small.span30.gold ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0024_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0002_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0022_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0008_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0018_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0003_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0027_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0009_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0028_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0031_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0015_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0026_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0044_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0044_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/rnacofold.small.concentrations.gold ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0011_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0003_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0048_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0048_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0023_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0022_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0045_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0030_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0004_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0014_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0046_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/rnacofold.small.rna_turner1999.par.mfe.gold ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0006_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0008_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0032_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0001_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0017_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0006_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0047_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0006_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0030_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0005_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0005_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0049_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0028_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0045_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0036_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0040_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0037_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0045_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0040_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0016_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0050_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0037_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0035_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0005_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0031_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0013_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0002_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0024_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0009_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0026_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0010_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0010_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0016_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0045_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0008_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0042_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0049_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0035_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0013_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0014_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0036_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0044_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0022_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0020_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0010_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0008_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0041_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0003_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0047_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0032_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0028_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0018_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0042_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0034_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0006_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0016_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0039_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0004_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0026_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0033_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0046_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0021_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0030_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0024_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0030_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0012_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/rnacofold.small.pf.gold ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0033_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0043_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0025_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0014_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0048_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0017_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0017_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0004_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0021_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0027_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0020_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0045_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0050_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0024_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0018_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0013_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0030_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0042_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0050_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0032_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0007_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0024_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0011_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0016_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0009_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/rnacofold.small.rna_andronescu2007.par.mfe.gold ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0012_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0027_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0006_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0033_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0036_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0010_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0002_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0037_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0019_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0037_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0015_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0019_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0009_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0040_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0043_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0028_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0033_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0031_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0007_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0034_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0004_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/rnacofold.small.d1.mfe.gold ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0043_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0012_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/rnacofold.small.pf.full.gold ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0034_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0039_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0034_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0023_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0028_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0044_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0041_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0025_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0047_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0026_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/rnacofold.small.d2.mfe.gold ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0046_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0038_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/rnacofold.small.T40.mfe.gold ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0046_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0007_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0038_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0043_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0002_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0004_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0005_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0049_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0027_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0029_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/rnacofold.small.dna_mathews2004.par.mfe.gold ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0013_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/rnacofold.small.d3.mfe.gold ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0038_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0015_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0049_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0011_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0022_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0032_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/rnacofold.small.d0.mfe.gold ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0026_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0042_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0005_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0020_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0027_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0040_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0025_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0001_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/rnacofold.small.noLP.mfe.gold ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0033_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0018_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0048_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0029_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0012_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0036_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0009_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0017_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0015_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0048_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0029_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0031_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/rnacofold.small.T25.mfe.gold ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0044_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0010_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0020_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/BBrnacofold_pf_test_0013_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0034_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0041_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/rnacofold.small.dna_mathews1999.par.mfe.gold ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0020_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0023_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Arnacofold_pf_test_0025_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0022_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/AArnacofold_pf_test_0012_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/Brnacofold_pf_test_0001_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/results/ABrnacofold_pf_test_0023_dp5.ps ViennaRNA-2.5.0/tests/RNAcofold/general ViennaRNA-2.5.0/tests/eval_structure.c ViennaRNA-2.5.0/tests/fold.ts ViennaRNA-2.5.0/tests/neighbor.c ViennaRNA-2.5.0/tests/py_include/ ViennaRNA-2.5.0/tests/py_include/__init__.py ViennaRNA-2.5.0/tests/py_include/taprunner/ ViennaRNA-2.5.0/tests/py_include/taprunner/__init__.py ViennaRNA-2.5.0/tests/constraints.ts ViennaRNA-2.5.0/tests/neighbor.ts ViennaRNA-2.5.0/tests/hash_table.c ViennaRNA-2.5.0/tests/constraints_soft.c ViennaRNA-2.5.0/packaging/ ViennaRNA-2.5.0/packaging/make_windows_installer.sh ViennaRNA-2.5.0/packaging/win_installer_archlinux_x86_64.nsi.in ViennaRNA-2.5.0/packaging/win_installer_archlinux_i686.nsi.in ViennaRNA-2.5.0/packaging/debian/ ViennaRNA-2.5.0/packaging/debian/changelog ViennaRNA-2.5.0/packaging/debian/viennarna-dev.install ViennaRNA-2.5.0/packaging/debian/source.lintian-overrides ViennaRNA-2.5.0/packaging/debian/viennarna-doc.install ViennaRNA-2.5.0/packaging/debian/python3-rna.install ViennaRNA-2.5.0/packaging/debian/perl-rna.install.in ViennaRNA-2.5.0/packaging/debian/compat ViennaRNA-2.5.0/packaging/debian/viennarna.install ViennaRNA-2.5.0/packaging/debian/rules ViennaRNA-2.5.0/packaging/debian/python-rna.install ViennaRNA-2.5.0/packaging/debian/copyright ViennaRNA-2.5.0/packaging/debian/control ViennaRNA-2.5.0/packaging/macosx/ ViennaRNA-2.5.0/packaging/macosx/Makefile.am ViennaRNA-2.5.0/packaging/macosx/resources/ ViennaRNA-2.5.0/packaging/macosx/resources/welcome.txt.in ViennaRNA-2.5.0/packaging/macosx/resources/conclusion.html ViennaRNA-2.5.0/packaging/macosx/resources/welcome.txt ViennaRNA-2.5.0/packaging/macosx/resources/ohm.png ViennaRNA-2.5.0/packaging/macosx/Makefile.in ViennaRNA-2.5.0/packaging/macosx/Distribution.xml.in ViennaRNA-2.5.0/packaging/macosx/uninstall-ViennaRNA-Package.sh ViennaRNA-2.5.0/packaging/viennarna.spec.in ViennaRNA-2.5.0/packaging/win_installer_fedora_x86_64.nsi.in ViennaRNA-2.5.0/packaging/win_installer_fedora_i686.nsi.in ViennaRNA-2.5.0/packaging/PKGBUILD.in ViennaRNA-2.5.0/README.md ViennaRNA-2.5.0/RNA-Tutorial/ ViennaRNA-2.5.0/RNA-Tutorial/Makefile.am ViennaRNA-2.5.0/RNA-Tutorial/Makefile.standalone ViennaRNA-2.5.0/RNA-Tutorial/tutorial.tex ViennaRNA-2.5.0/RNA-Tutorial/Makefile.in ViennaRNA-2.5.0/RNA-Tutorial/pgfsys-tex4ht.def ViennaRNA-2.5.0/RNA-Tutorial/Figures/ ViennaRNA-2.5.0/RNA-Tutorial/Figures/switch_barriertree_e13-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/sci.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/qrna.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/forties_50nM_dp-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/gquad_menon_nice.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/tbilogo.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/gquad-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/switch_treekin.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/RybB_ss-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/aout.tex ViennaRNA-2.5.0/RNA-Tutorial/Figures/sci-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/gquad_menon.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/FOO_dp.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/2dfold_out_m-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/5S_mt.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/theo_aptamer.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/test_dp.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/histos.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/RybB_ss.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/switch_barriertree.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/switch_barriertree_e13.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/tree-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/switch_barriertree_e13.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/alio.tex ViennaRNA-2.5.0/RNA-Tutorial/Figures/table-browser-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/alirna.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/gquad_pattern.svg ViennaRNA-2.5.0/RNA-Tutorial/Figures/gquad_menon.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/gquad.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/tconcdep.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/gquad_pattern.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/tRNAs.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/RybB_ss.ps_v1 ViennaRNA-2.5.0/RNA-Tutorial/Figures/histos-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/test_ss-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/tree.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/trna-histo-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/gquad_pattern-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/tconcdep-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/flowchart-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/5S_rot.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/5S_rot.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/test_ss.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/switch_barriertree.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/gquad_menon_nice.svg ViennaRNA-2.5.0/RNA-Tutorial/Figures/RNaseP_anot.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/switch_treekin.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/FOOtree.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/ompN_ss.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/OmpN_cofold.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/alidot.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/switch_treekin-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/tRNAs.tex ViennaRNA-2.5.0/RNA-Tutorial/Figures/aout.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/forties_ss.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/contour.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/alirna-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/gquad.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/OmpN_cofold.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/gquad_menon-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/5S_rss.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/alio.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/2dfold_2_out_m-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/tRNAs.seq ViennaRNA-2.5.0/RNA-Tutorial/Figures/2dfold_out_m.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/qrna.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/t_ss.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/5S_ss.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/trna-histo.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/aln.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/flowchart.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/sci.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/table-browser.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/ompN_ss-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/FOO-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/FOO.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/tree.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/t_dp.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/2dfold_2_out_m.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/ec_RNaseP.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/snos.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/5S_mt-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/table-browser.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/forties_50nM_dp.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/2dfold.out.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/gquad_menon.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/gquad_menon.svg ViennaRNA-2.5.0/RNA-Tutorial/Figures/ompN_ss.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/theo_aptamer-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/test_ss.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/RybB_ss.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/snos.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/alidot-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/switch_barriertree-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/snos-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/2dfold_2.out.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/gquad.svg ViennaRNA-2.5.0/RNA-Tutorial/Figures/5S_rot-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/flowchart.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/alidot.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/gquad_menon_nice-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/qrna-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/gquad_pattern.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/5S_ss.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/2dfold_out_m.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/gquad_menon_nice.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/trna-histo.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/5S_mt.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/histos.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/bed-upload.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/tconcdep.agr ViennaRNA-2.5.0/RNA-Tutorial/Figures/test_dp.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/FOOdot.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/5S_dp.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/FOO.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/test_mt.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/t_dp.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/contour.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/forties_ss.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/2dfold_2_out_m.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/ompN_ss.ps_v1 ViennaRNA-2.5.0/RNA-Tutorial/Figures/theo_aptamer.svg ViennaRNA-2.5.0/RNA-Tutorial/Figures/forties_50nM_dp.eps ViennaRNA-2.5.0/RNA-Tutorial/Figures/OmpN_cofold-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/FOO_dp-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/FOO_dp.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/alirna.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/t_ss.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/forties_ss-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/t_ss-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/contour-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/t_dp-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/test_dp-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/theo_aptamer.png ViennaRNA-2.5.0/RNA-Tutorial/Figures/5S_ss-eps-converted-to.pdf ViennaRNA-2.5.0/RNA-Tutorial/Figures/tconcdep.eps ViennaRNA-2.5.0/RNA-Tutorial/keystroke.4ht ViennaRNA-2.5.0/RNA-Tutorial/RNA-tutorial-2.5.0.pdf ViennaRNA-2.5.0/RNA-Tutorial/ViennaRNA-homepage.cfg ViennaRNA-2.5.0/RNA-Tutorial/Data/ ViennaRNA-2.5.0/RNA-Tutorial/Data/t.seq ViennaRNA-2.5.0/RNA-Tutorial/Data/hard_const_example.fa ViennaRNA-2.5.0/RNA-Tutorial/Data/RNaseP.seq ViennaRNA-2.5.0/RNA-Tutorial/Data/programs/ ViennaRNA-2.5.0/RNA-Tutorial/Data/programs/alifoldz_adopted.tar.gz ViennaRNA-2.5.0/RNA-Tutorial/Data/programs/qrna-2.0.3d.tar.gz ViennaRNA-2.5.0/RNA-Tutorial/Data/RNaseP.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/duplex.seq ViennaRNA-2.5.0/RNA-Tutorial/Data/5S.seq ViennaRNA-2.5.0/RNA-Tutorial/Data/RybB.seq ViennaRNA-2.5.0/RNA-Tutorial/Data/duplex2.seq ViennaRNA-2.5.0/RNA-Tutorial/Data/alifoldz/ ViennaRNA-2.5.0/RNA-Tutorial/Data/alifoldz/unknown.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/alifoldz/miRNA.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/RNaseP.dnd ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/ ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/herpes/ ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/herpes/annotation.bed ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/herpes/NC_006146 ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/herpes/NC_004367 ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/herpes/x/ ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/herpes/x/annotation.bed ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/herpes/x/NC_007605.NC_006146.orig.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/herpes/x/NC_007605.NC_004367.sing.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/herpes/x/NC_007605.NC_006146.sing.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/herpes/x/final.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/herpes/x/NC_006146 ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/herpes/x/NC_004367 ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/herpes/x/NC_007605.NC_004367.orig.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/herpes/x/rnaz_random.out ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/herpes/x/windows_random.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/herpes/x/results.dat ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/herpes/x/NC_006146.NC_004367.orig.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/herpes/x/results_annotated.dat ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/herpes/x/results_random.dat ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/herpes/x/windows.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/herpes/x/NC_006146.NC_004367.sing.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/herpes/x/random.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/herpes/x/NC_007605 ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/herpes/x/raw-tba.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/herpes/x/rnaz.out ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/herpes/NC_007605 ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/tRNA.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/ ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/annotation.bed ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/ ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/annotation.bed ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/prediction.bed ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/region.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/ ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus2/ ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus2/window3_alidot.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus2/window4_alidot.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus2/window2_alidot.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus2/window3_aln.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus2/window3_alirna.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus2/window2_alirna.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus2/window2_alidot.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus2/window2_alirna.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus2/window3.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus2/alifold.out ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus2/window4_aln.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus2/window2_aln.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus2/window4_alidot.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus2/window4_alirna.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus2/map.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus2/window2.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus2/map.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus2/window2.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus2/window4.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus2/window4_alirna.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus2/index.html ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus2/window2_aln.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus2/window3_alidot.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus2/window3_aln.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus2/window4_aln.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus2/window3.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus2/window4.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus2/window3_alirna.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus4/ ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus4/window7_alidot.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus4/window7_aln.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus4/window7_alirna.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus4/window7_alidot.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus4/alifold.out ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus4/map.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus4/window7.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus4/map.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus4/window7.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus4/index.html ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus4/window7_alirna.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus4/window7_aln.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus5/ ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus5/window8_alidot.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus5/window8.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus5/window8_aln.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus5/window8_aln.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus5/window8.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus5/alifold.out ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus5/window8_alirna.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus5/map.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus5/window8_alidot.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus5/map.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus5/index.html ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus5/window8_alirna.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus6/ ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus6/window10.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus6/window11.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus6/window11_alirna.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus6/window9_aln.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus6/window9_alidot.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus6/window10_alirna.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus6/window10_aln.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus6/window9.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus6/window10.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus6/window11.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus6/window9_alirna.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus6/window11_aln.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus6/window11_alidot.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus6/alifold.out ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus6/window9_alirna.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus6/map.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus6/window10_alidot.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus6/map.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus6/window11_aln.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus6/index.html ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus6/window10_alidot.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus6/window9_aln.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus6/window11_alirna.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus6/window9.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus6/window11_alidot.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus6/window10_alirna.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus6/window9_alidot.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus6/window10_aln.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus7/ ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus7/window13_alidot.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus7/window13.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus7/window13_alirna.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus7/window12_alirna.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus7/window12_alirna.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus7/window12_aln.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus7/window13_alidot.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus7/alifold.out ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus7/window13.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus7/map.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus7/map.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus7/window12.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus7/window13_aln.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus7/index.html ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus7/window12_alidot.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus7/window12_aln.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus7/window13_alirna.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus7/window12_alidot.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus7/window13_aln.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus7/window12.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus3/ ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus3/window6_alidot.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus3/window6_alirna.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus3/window5.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus3/window5_alidot.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus3/window6_aln.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus3/window6_alidot.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus3/alifold.out ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus3/window5_alirna.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus3/window5_alirna.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus3/map.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus3/window6_alirna.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus3/window5_aln.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus3/map.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus3/window6.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus3/window6_aln.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus3/window5.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus3/index.html ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus3/window5_aln.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus3/window5_alidot.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus3/window6.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus1/ ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus1/window1_alirna.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus1/window1_aln.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus1/window1_alirna.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus1/window1_alidot.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus1/alifold.out ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus1/map.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus1/map.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus1/window1.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus1/index.html ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus1/window1_alidot.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus1/window1.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/locus1/window1_aln.png ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results/index.html ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results.dat ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/results_annotated.dat ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/windows.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/human/x/rnaz.out ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/IRE.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/miRNA.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/unknown.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/snoRNA.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/rnaz/tRNA.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/RNAstructure.zip ViennaRNA-2.5.0/RNA-Tutorial/Data/test.const ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/ ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/alifoldz/ ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/alifoldz/unknown.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/alifoldz/miRNA.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/ ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/herpes/ ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/herpes/annotation.bed ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/herpes/NC_006146 ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/herpes/NC_004367 ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/herpes/x/ ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/herpes/x/annotation.bed ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/herpes/x/NC_007605.NC_006146.orig.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/herpes/x/NC_007605.NC_004367.sing.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/herpes/x/NC_007605.NC_006146.sing.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/herpes/x/final.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/herpes/x/NC_006146 ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/herpes/x/NC_004367 ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/herpes/x/NC_007605.NC_004367.orig.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/herpes/x/rnaz_random.out ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/herpes/x/windows_random.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/herpes/x/results.dat ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/herpes/x/NC_006146.NC_004367.orig.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/herpes/x/results_annotated.dat ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/herpes/x/results_random.dat ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/herpes/x/windows.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/herpes/x/NC_006146.NC_004367.sing.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/herpes/x/random.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/herpes/x/NC_007605 ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/herpes/x/raw-tba.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/herpes/x/rnaz.out ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/herpes/NC_007605 ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/tRNA.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/ ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/annotation.bed ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/ ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/annotation.bed ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/prediction.bed ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/region.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/ ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus2/ ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus2/window3_alidot.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus2/window4_alidot.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus2/window2_alidot.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus2/window3_aln.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus2/window3_alirna.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus2/window2_alirna.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus2/window2_alidot.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus2/window2_alirna.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus2/window3.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus2/alifold.out ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus2/window4_aln.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus2/window2_aln.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus2/window4_alidot.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus2/window4_alirna.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus2/map.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus2/window2.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus2/map.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus2/window2.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus2/window4.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus2/window4_alirna.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus2/index.html ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus2/window2_aln.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus2/window3_alidot.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus2/window3_aln.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus2/window4_aln.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus2/window3.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus2/window4.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus2/window3_alirna.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus4/ ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus4/window7_alidot.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus4/window7_aln.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus4/window7_alirna.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus4/window7_alidot.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus4/alifold.out ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus4/map.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus4/window7.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus4/map.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus4/window7.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus4/index.html ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus4/window7_alirna.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus4/window7_aln.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus5/ ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus5/window8_alidot.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus5/window8.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus5/window8_aln.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus5/window8_aln.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus5/window8.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus5/alifold.out ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus5/window8_alirna.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus5/map.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus5/window8_alidot.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus5/map.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus5/index.html ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus5/window8_alirna.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus6/ ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus6/window10.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus6/window11.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus6/window11_alirna.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus6/window9_aln.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus6/window9_alidot.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus6/window10_alirna.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus6/window10_aln.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus6/window9.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus6/window10.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus6/window11.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus6/window9_alirna.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus6/window11_aln.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus6/window11_alidot.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus6/alifold.out ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus6/window9_alirna.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus6/map.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus6/window10_alidot.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus6/map.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus6/window11_aln.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus6/index.html ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus6/window10_alidot.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus6/window9_aln.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus6/window11_alirna.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus6/window9.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus6/window11_alidot.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus6/window10_alirna.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus6/window9_alidot.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus6/window10_aln.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus7/ ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus7/window13_alidot.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus7/window13.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus7/window13_alirna.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus7/window12_alirna.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus7/window12_alirna.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus7/window12_aln.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus7/window13_alidot.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus7/alifold.out ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus7/window13.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus7/map.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus7/map.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus7/window12.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus7/window13_aln.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus7/index.html ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus7/window12_alidot.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus7/window12_aln.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus7/window13_alirna.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus7/window12_alidot.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus7/window13_aln.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus7/window12.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus3/ ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus3/window6_alidot.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus3/window6_alirna.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus3/window5.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus3/window5_alidot.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus3/window6_aln.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus3/window6_alidot.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus3/alifold.out ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus3/window5_alirna.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus3/window5_alirna.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus3/map.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus3/window6_alirna.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus3/window5_aln.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus3/map.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus3/window6.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus3/window6_aln.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus3/window5.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus3/index.html ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus3/window5_aln.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus3/window5_alidot.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus3/window6.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus1/ ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus1/window1_alirna.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus1/window1_aln.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus1/window1_alirna.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus1/window1_alidot.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus1/alifold.out ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus1/map.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus1/map.ps ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus1/window1.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus1/index.html ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus1/window1_alidot.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus1/window1.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/locus1/window1_aln.png ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results/index.html ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results.dat ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/results_annotated.dat ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/windows.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/human/x/rnaz.out ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/IRE.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/miRNA.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/unknown.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/snoRNA.aln ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/rnaz/tRNA.maf ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/qrna/ ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/qrna/tRNA.fa ViennaRNA-2.5.0/RNA-Tutorial/Data/genefinding/qrna/coding.fa ViennaRNA-2.5.0/RNA-Tutorial/Data/qrna/ ViennaRNA-2.5.0/RNA-Tutorial/Data/qrna/tRNA.fa ViennaRNA-2.5.0/RNA-Tutorial/Data/qrna/coding.fa ViennaRNA-2.5.0/RNA-Tutorial/Data/FOO.seq ViennaRNA-2.5.0/RNA-Tutorial/Data/dot.emacs ViennaRNA-2.5.0/RNA-Tutorial/Data/four.seq ViennaRNA-2.5.0/config.h.in ViennaRNA-2.5.0/src/ ViennaRNA-2.5.0/src/Makefile.am ViennaRNA-2.5.0/src/Utils/ ViennaRNA-2.5.0/src/Utils/Makefile.am ViennaRNA-2.5.0/src/Utils/mountain.pl ViennaRNA-2.5.0/src/Utils/relplot.pl ViennaRNA-2.5.0/src/Utils/rotate_ss.pl ViennaRNA-2.5.0/src/Utils/refold.pl ViennaRNA-2.5.0/src/Utils/dpzoom.pl ViennaRNA-2.5.0/src/Utils/Makefile.in ViennaRNA-2.5.0/src/Utils/b2ct.c ViennaRNA-2.5.0/src/Utils/b2mt.pl ViennaRNA-2.5.0/src/Utils/cmount.pl ViennaRNA-2.5.0/src/Utils/ct2db_cmdl.h ViennaRNA-2.5.0/src/Utils/RNAdesign.pl ViennaRNA-2.5.0/src/Utils/ct2db_cmdl.c ViennaRNA-2.5.0/src/Utils/README ViennaRNA-2.5.0/src/Utils/coloraln.pl ViennaRNA-2.5.0/src/Utils/ct2db.c ViennaRNA-2.5.0/src/Utils/switch.pl ViennaRNA-2.5.0/src/Utils/ct2db.ggo ViennaRNA-2.5.0/src/Utils/popt.c ViennaRNA-2.5.0/src/RNAforester/ ViennaRNA-2.5.0/src/RNAforester/Makefile.am ViennaRNA-2.5.0/src/RNAforester/AUTHORS ViennaRNA-2.5.0/src/RNAforester/configure ViennaRNA-2.5.0/src/RNAforester/NEWS ViennaRNA-2.5.0/src/RNAforester/COPYING ViennaRNA-2.5.0/src/RNAforester/g2-0.72/ ViennaRNA-2.5.0/src/RNAforester/g2-0.72/g2dll.dsp ViennaRNA-2.5.0/src/RNAforester/g2-0.72/simple_win32.dsp ViennaRNA-2.5.0/src/RNAforester/g2-0.72/Makefile ViennaRNA-2.5.0/src/RNAforester/g2-0.72/configure ViennaRNA-2.5.0/src/RNAforester/g2-0.72/doc/ ViennaRNA-2.5.0/src/RNAforester/g2-0.72/doc/Doxyfile ViennaRNA-2.5.0/src/RNAforester/g2-0.72/doc/refman.pdf ViennaRNA-2.5.0/src/RNAforester/g2-0.72/doc/g2_main.dox ViennaRNA-2.5.0/src/RNAforester/g2-0.72/doc/refman.ps ViennaRNA-2.5.0/src/RNAforester/g2-0.72/gd.dsp ViennaRNA-2.5.0/src/RNAforester/g2-0.72/autom4te.cache/ ViennaRNA-2.5.0/src/RNAforester/g2-0.72/autom4te.cache/output.6 ViennaRNA-2.5.0/src/RNAforester/g2-0.72/autom4te.cache/traces.3 ViennaRNA-2.5.0/src/RNAforester/g2-0.72/autom4te.cache/traces.2 ViennaRNA-2.5.0/src/RNAforester/g2-0.72/autom4te.cache/traces.0 ViennaRNA-2.5.0/src/RNAforester/g2-0.72/autom4te.cache/output.1 ViennaRNA-2.5.0/src/RNAforester/g2-0.72/autom4te.cache/traces.4 ViennaRNA-2.5.0/src/RNAforester/g2-0.72/autom4te.cache/output.2 ViennaRNA-2.5.0/src/RNAforester/g2-0.72/autom4te.cache/output.0 ViennaRNA-2.5.0/src/RNAforester/g2-0.72/autom4te.cache/output.3 ViennaRNA-2.5.0/src/RNAforester/g2-0.72/autom4te.cache/output.4 ViennaRNA-2.5.0/src/RNAforester/g2-0.72/autom4te.cache/requests ViennaRNA-2.5.0/src/RNAforester/g2-0.72/autom4te.cache/traces.1 ViennaRNA-2.5.0/src/RNAforester/g2-0.72/autom4te.cache/traces.6 ViennaRNA-2.5.0/src/RNAforester/g2-0.72/autom4te.cache/output.5 ViennaRNA-2.5.0/src/RNAforester/g2-0.72/autom4te.cache/traces.5 ViennaRNA-2.5.0/src/RNAforester/g2-0.72/COPYING ViennaRNA-2.5.0/src/RNAforester/g2-0.72/g2.dsp ViennaRNA-2.5.0/src/RNAforester/g2-0.72/g2_anim.dsp ViennaRNA-2.5.0/src/RNAforester/g2-0.72/g2_python/ ViennaRNA-2.5.0/src/RNAforester/g2-0.72/g2_python/penguin.py ViennaRNA-2.5.0/src/RNAforester/g2-0.72/g2_python/g2module.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/g2_python/Makefile ViennaRNA-2.5.0/src/RNAforester/g2-0.72/g2_python/g2_test.py ViennaRNA-2.5.0/src/RNAforester/g2-0.72/g2_python/Makefile.in ViennaRNA-2.5.0/src/RNAforester/g2-0.72/g2_python/README ViennaRNA-2.5.0/src/RNAforester/g2-0.72/g2_python/setup.py ViennaRNA-2.5.0/src/RNAforester/g2-0.72/CHANGES ViennaRNA-2.5.0/src/RNAforester/g2-0.72/Makefile.in ViennaRNA-2.5.0/src/RNAforester/g2-0.72/config.sub ViennaRNA-2.5.0/src/RNAforester/g2-0.72/config.guess ViennaRNA-2.5.0/src/RNAforester/g2-0.72/g2res.dsp ViennaRNA-2.5.0/src/RNAforester/g2-0.72/configure.ac ViennaRNA-2.5.0/src/RNAforester/g2-0.72/INSTALL ViennaRNA-2.5.0/src/RNAforester/g2-0.72/TODO ViennaRNA-2.5.0/src/RNAforester/g2-0.72/descrip.mms ViennaRNA-2.5.0/src/RNAforester/g2-0.72/install-sh ViennaRNA-2.5.0/src/RNAforester/g2-0.72/perl/ ViennaRNA-2.5.0/src/RNAforester/g2-0.72/perl/g2.pm ViennaRNA-2.5.0/src/RNAforester/g2-0.72/perl/README.perl ViennaRNA-2.5.0/src/RNAforester/g2-0.72/perl/Makefile.PL ViennaRNA-2.5.0/src/RNAforester/g2-0.72/perl/g2_wrap.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/include/ ViennaRNA-2.5.0/src/RNAforester/g2-0.72/g2.dsw ViennaRNA-2.5.0/src/RNAforester/g2-0.72/g2demo.dsp ViennaRNA-2.5.0/src/RNAforester/g2-0.72/README ViennaRNA-2.5.0/src/RNAforester/g2-0.72/g2_perl/ ViennaRNA-2.5.0/src/RNAforester/g2-0.72/g2_perl/typemap ViennaRNA-2.5.0/src/RNAforester/g2-0.72/g2_perl/G2.pm ViennaRNA-2.5.0/src/RNAforester/g2-0.72/g2_perl/test.pl ViennaRNA-2.5.0/src/RNAforester/g2-0.72/g2_perl/Makefile.PL.in ViennaRNA-2.5.0/src/RNAforester/g2-0.72/g2_perl/G2.xs ViennaRNA-2.5.0/src/RNAforester/g2-0.72/g2_perl/Makefile.PL ViennaRNA-2.5.0/src/RNAforester/g2-0.72/g2_perl/README ViennaRNA-2.5.0/src/RNAforester/g2-0.72/g2_perl/Changes ViennaRNA-2.5.0/src/RNAforester/g2-0.72/g2_perl/MANIFEST ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/ ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/g2_control_pd.h ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/g2_virtual_device.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/.gitignore ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/g2_graphic_pd.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/g2.h ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/g2_physical_device.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/g2_util.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/g2_util.h ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/g2_physical_device.h ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/g2_ui_graphic.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/GD/ ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/GD/g2_gd_funix.h ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/GD/g2_gd.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/GD/g2_gd_P.h ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/GD/g2_gd.h ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/g2_ui_virtual_device.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/Win32/ ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/Win32/g2_win32.rc ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/Win32/g2_win32.h ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/Win32/g2_win32.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/Win32/g2_win32_funix.h ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/Win32/g2res.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/Win32/g2_Win32.ico ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/Win32/g2_win32_thread.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/Win32/g2_win32_P.h ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/Win32/resource.h ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/g2_graphic_pd.h ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/g2_splines.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/g2_fif.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/g2_virtual_device.h ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/X11/ ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/X11/g2_X11.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/X11/g2_X11_P.h ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/X11/g2_X11.h ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/X11/g2_X11_funix.h ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/X11/g2.xpm ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/PS/ ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/PS/g2_PS_P.h ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/PS/g2_PS_funix.h ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/PS/g2_PS.h ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/PS/g2_PS_definitions.h ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/PS/g2_PS.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/g2_config.h ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/g2_funix.h ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/g2_device.h ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/g2_ui_device.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/g2_control_pd.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/g2_device.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/FIG/ ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/FIG/g2_FIG_P.h ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/FIG/g2_FIG_funix.h ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/FIG/g2_FIG.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/FIG/g2_FIG.h ViennaRNA-2.5.0/src/RNAforester/g2-0.72/src/g2_ui_control.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/demo/ ViennaRNA-2.5.0/src/RNAforester/g2-0.72/demo/demo_f.f ViennaRNA-2.5.0/src/RNAforester/g2-0.72/demo/Makefile ViennaRNA-2.5.0/src/RNAforester/g2-0.72/demo/pointer.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/demo/g2_test.f ViennaRNA-2.5.0/src/RNAforester/g2-0.72/demo/g2_arc.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/demo/simple_X11.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/demo/g2_splines_demo.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/demo/Makefile.in ViennaRNA-2.5.0/src/RNAforester/g2-0.72/demo/handles.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/demo/simple_PS.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/demo/penguin.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/demo/g2_anim.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/demo/descrip.mms ViennaRNA-2.5.0/src/RNAforester/g2-0.72/demo/simple_win32.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/demo/g2_test.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/demo/penguin.inc ViennaRNA-2.5.0/src/RNAforester/g2-0.72/demo/simple_gd.c ViennaRNA-2.5.0/src/RNAforester/g2-0.72/demo/demo_cpp.cpp ViennaRNA-2.5.0/src/RNAforester/g2-0.72/demo/xlink.opt ViennaRNA-2.5.0/src/RNAforester/g2-0.72/demo/simple_FIG.c ViennaRNA-2.5.0/src/RNAforester/aclocal.m4 ViennaRNA-2.5.0/src/RNAforester/ylwrap ViennaRNA-2.5.0/src/RNAforester/man/ ViennaRNA-2.5.0/src/RNAforester/man/Makefile.am ViennaRNA-2.5.0/src/RNAforester/man/Makefile.in ViennaRNA-2.5.0/src/RNAforester/man/RNAforester.1 ViennaRNA-2.5.0/src/RNAforester/Makefile.in ViennaRNA-2.5.0/src/RNAforester/configure.ac ViennaRNA-2.5.0/src/RNAforester/INSTALL ViennaRNA-2.5.0/src/RNAforester/missing ViennaRNA-2.5.0/src/RNAforester/TODO ViennaRNA-2.5.0/src/RNAforester/install-sh ViennaRNA-2.5.0/src/RNAforester/depcomp ViennaRNA-2.5.0/src/RNAforester/README ViennaRNA-2.5.0/src/RNAforester/compile ViennaRNA-2.5.0/src/RNAforester/config.h.in ViennaRNA-2.5.0/src/RNAforester/src/ ViennaRNA-2.5.0/src/RNAforester/src/Makefile.am ViennaRNA-2.5.0/src/RNAforester/src/rnafuncs.cpp ViennaRNA-2.5.0/src/RNAforester/src/forest.t.cpp ViennaRNA-2.5.0/src/RNAforester/src/wmatch/ ViennaRNA-2.5.0/src/RNAforester/src/wmatch/graphtypes.h ViennaRNA-2.5.0/src/RNAforester/src/wmatch/pointer.c ViennaRNA-2.5.0/src/RNAforester/src/wmatch/unpairs.c ViennaRNA-2.5.0/src/RNAforester/src/wmatch/wmatch.h ViennaRNA-2.5.0/src/RNAforester/src/wmatch/readgraph.c ViennaRNA-2.5.0/src/RNAforester/src/wmatch/glib.c ViennaRNA-2.5.0/src/RNAforester/src/wmatch/match.defs ViennaRNA-2.5.0/src/RNAforester/src/wmatch/pairs.c ViennaRNA-2.5.0/src/RNAforester/src/wmatch/wmatch.c ViennaRNA-2.5.0/src/RNAforester/src/wmatch/term.c ViennaRNA-2.5.0/src/RNAforester/src/alignment.h ViennaRNA-2.5.0/src/RNAforester/src/rnaforest.h ViennaRNA-2.5.0/src/RNAforester/src/rna_alignment.cpp ViennaRNA-2.5.0/src/RNAforester/src/parser.h ViennaRNA-2.5.0/src/RNAforester/src/parser.cpp ViennaRNA-2.5.0/src/RNAforester/src/aligner.cpp ViennaRNA-2.5.0/src/RNAforester/src/forest.h ViennaRNA-2.5.0/src/RNAforester/src/algebra.h ViennaRNA-2.5.0/src/RNAforester/src/main.cpp ViennaRNA-2.5.0/src/RNAforester/src/rnafuncs.h ViennaRNA-2.5.0/src/RNAforester/src/rna_algebra.cpp ViennaRNA-2.5.0/src/RNAforester/src/forestbase.cpp ViennaRNA-2.5.0/src/RNAforester/src/alignment.t.cpp ViennaRNA-2.5.0/src/RNAforester/src/progressive_align.h ViennaRNA-2.5.0/src/RNAforester/src/Makefile.in ViennaRNA-2.5.0/src/RNAforester/src/rna_profile_alignment.h ViennaRNA-2.5.0/src/RNAforester/src/aligner.h ViennaRNA-2.5.0/src/RNAforester/src/rna_algebra.h ViennaRNA-2.5.0/src/RNAforester/src/rna_profile_alignment.cpp ViennaRNA-2.5.0/src/RNAforester/src/alignment_tables.h ViennaRNA-2.5.0/src/RNAforester/src/forestbase.h ViennaRNA-2.5.0/src/RNAforester/src/rna_alignment.h ViennaRNA-2.5.0/src/RNAforester/src/rnaforest.cpp ViennaRNA-2.5.0/src/RNAforester/src/rna_alphabet.h ViennaRNA-2.5.0/src/RNAforester/src/TED/ ViennaRNA-2.5.0/src/RNAforester/src/TED/forestsz.t.cpp ViennaRNA-2.5.0/src/RNAforester/src/TED/forestsz.h ViennaRNA-2.5.0/src/RNAforester/src/TED/treeedit.t.cpp ViennaRNA-2.5.0/src/RNAforester/src/TED/rnaforestsz.cpp ViennaRNA-2.5.0/src/RNAforester/src/TED/rnaforestsz.h ViennaRNA-2.5.0/src/RNAforester/src/TED/treeedit.h ViennaRNA-2.5.0/src/RNAforester/src/frontend/ ViennaRNA-2.5.0/src/RNAforester/src/frontend/Arguments.h ViennaRNA-2.5.0/src/RNAforester/src/frontend/rnaforester_options.h ViennaRNA-2.5.0/src/RNAforester/src/frontend/rnaforester_options.cpp ViennaRNA-2.5.0/src/RNAforester/src/frontend/Arguments.cpp ViennaRNA-2.5.0/src/RNAforester/src/utils/ ViennaRNA-2.5.0/src/RNAforester/src/utils/debug.h ViennaRNA-2.5.0/src/RNAforester/src/utils/utils.h ViennaRNA-2.5.0/src/RNAforester/src/utils/misc.t.cpp ViennaRNA-2.5.0/src/RNAforester/src/utils/misc.h ViennaRNA-2.5.0/src/RNAforester/src/utils/matrix.h ViennaRNA-2.5.0/src/RNAforester/src/forestali.h ViennaRNA-2.5.0/src/RNAforester/src/anchors/ ViennaRNA-2.5.0/src/RNAforester/src/anchors/basepair.h ViennaRNA-2.5.0/src/RNAforester/src/anchors/anchors.h ViennaRNA-2.5.0/src/RNAforester/src/anchors/shape.ypp ViennaRNA-2.5.0/src/RNAforester/src/anchors/anchors.cpp ViennaRNA-2.5.0/src/RNAforester/src/anchors/bplex.lpp ViennaRNA-2.5.0/src/RNAforester/src/anchors/shape.cpp ViennaRNA-2.5.0/src/RNAforester/src/anchors/bplex.cpp ViennaRNA-2.5.0/src/RNAforester/src/anchors/shape.hpp ViennaRNA-2.5.0/src/RNAforester/src/progressive_align.cpp ViennaRNA-2.5.0/src/RNAforester/src/rna_alphabet.cpp ViennaRNA-2.5.0/src/RNAforester/ChangeLog ViennaRNA-2.5.0/src/Makefile.in ViennaRNA-2.5.0/src/Kinfold/ ViennaRNA-2.5.0/src/Kinfold/Makefile.am ViennaRNA-2.5.0/src/Kinfold/AUTHORS ViennaRNA-2.5.0/src/Kinfold/configure ViennaRNA-2.5.0/src/Kinfold/NEWS ViennaRNA-2.5.0/src/Kinfold/COPYING ViennaRNA-2.5.0/src/Kinfold/globals.h ViennaRNA-2.5.0/src/Kinfold/baum.c ViennaRNA-2.5.0/src/Kinfold/aclocal.m4 ViennaRNA-2.5.0/src/Kinfold/kinfold.ggo ViennaRNA-2.5.0/src/Kinfold/globals.c ViennaRNA-2.5.0/src/Kinfold/cache.c ViennaRNA-2.5.0/src/Kinfold/Example/ ViennaRNA-2.5.0/src/Kinfold/Example/Makefile.am ViennaRNA-2.5.0/src/Kinfold/Example/hpin.e.log ViennaRNA-2.5.0/src/Kinfold/Example/traj.ae ViennaRNA-2.5.0/src/Kinfold/Example/hpin.in ViennaRNA-2.5.0/src/Kinfold/Example/Makefile.in ViennaRNA-2.5.0/src/Kinfold/Example/traj.e ViennaRNA-2.5.0/src/Kinfold/Example/hpin.nolp.log ViennaRNA-2.5.0/src/Kinfold/Example/traj.nolp ViennaRNA-2.5.0/src/Kinfold/Example/README ViennaRNA-2.5.0/src/Kinfold/Example/traj ViennaRNA-2.5.0/src/Kinfold/Example/hpin.log ViennaRNA-2.5.0/src/Kinfold/Example/hpin.ae.log ViennaRNA-2.5.0/src/Kinfold/Makefile.in ViennaRNA-2.5.0/src/Kinfold/config.sub ViennaRNA-2.5.0/src/Kinfold/config.guess ViennaRNA-2.5.0/src/Kinfold/configure.ac ViennaRNA-2.5.0/src/Kinfold/INSTALL ViennaRNA-2.5.0/src/Kinfold/cmdline.c ViennaRNA-2.5.0/src/Kinfold/missing ViennaRNA-2.5.0/src/Kinfold/nachbar.h ViennaRNA-2.5.0/src/Kinfold/install-sh ViennaRNA-2.5.0/src/Kinfold/depcomp ViennaRNA-2.5.0/src/Kinfold/Kinfold.1 ViennaRNA-2.5.0/src/Kinfold/baum.h ViennaRNA-2.5.0/src/Kinfold/cache_util.h ViennaRNA-2.5.0/src/Kinfold/nachbar.c ViennaRNA-2.5.0/src/Kinfold/Laplace/ ViennaRNA-2.5.0/src/Kinfold/Laplace/laplace.sh ViennaRNA-2.5.0/src/Kinfold/Laplace/extract_data.pl ViennaRNA-2.5.0/src/Kinfold/Laplace/seq1 ViennaRNA-2.5.0/src/Kinfold/Laplace/README ViennaRNA-2.5.0/src/Kinfold/Laplace/to_boxplot.R ViennaRNA-2.5.0/src/Kinfold/Laplace/seq1_ref.ps ViennaRNA-2.5.0/src/Kinfold/README.md ViennaRNA-2.5.0/src/Kinfold/cmdline.h ViennaRNA-2.5.0/src/Kinfold/main.c ViennaRNA-2.5.0/src/Kinfold/compile ViennaRNA-2.5.0/src/Kinfold/config.h.in ViennaRNA-2.5.0/src/Kinfold/ChangeLog ViennaRNA-2.5.0/src/Kinwalker/ ViennaRNA-2.5.0/src/Kinwalker/Makefile.am ViennaRNA-2.5.0/src/Kinwalker/options.c ViennaRNA-2.5.0/src/Kinwalker/configure ViennaRNA-2.5.0/src/Kinwalker/aclocal.m4 ViennaRNA-2.5.0/src/Kinwalker/main.cpp ViennaRNA-2.5.0/src/Kinwalker/Energy.h ViennaRNA-2.5.0/src/Kinwalker/Node.cpp ViennaRNA-2.5.0/src/Kinwalker/man/ ViennaRNA-2.5.0/src/Kinwalker/man/Makefile.am ViennaRNA-2.5.0/src/Kinwalker/man/kinwalker.1 ViennaRNA-2.5.0/src/Kinwalker/man/Makefile.in ViennaRNA-2.5.0/src/Kinwalker/Makefile.in ViennaRNA-2.5.0/src/Kinwalker/options.h ViennaRNA-2.5.0/src/Kinwalker/Node.h ViennaRNA-2.5.0/src/Kinwalker/configure.ac ViennaRNA-2.5.0/src/Kinwalker/INSTALL ViennaRNA-2.5.0/src/Kinwalker/missing ViennaRNA-2.5.0/src/Kinwalker/Util.h ViennaRNA-2.5.0/src/Kinwalker/install-sh ViennaRNA-2.5.0/src/Kinwalker/depcomp ViennaRNA-2.5.0/src/Kinwalker/MorganHiggs.h ViennaRNA-2.5.0/src/Kinwalker/Energy.cpp ViennaRNA-2.5.0/src/Kinwalker/Util.cpp ViennaRNA-2.5.0/src/Kinwalker/kinfold_test.seq ViennaRNA-2.5.0/src/Kinwalker/template_utils.c ViennaRNA-2.5.0/src/Kinwalker/compile ViennaRNA-2.5.0/src/Kinwalker/config.h.in ViennaRNA-2.5.0/src/Kinwalker/MorganHiggs.cpp ViennaRNA-2.5.0/src/libsvm-3.25/ ViennaRNA-2.5.0/src/libsvm-3.25/Makefile ViennaRNA-2.5.0/src/libsvm-3.25/Makefile.win ViennaRNA-2.5.0/src/libsvm-3.25/.deps/ ViennaRNA-2.5.0/src/libsvm-3.25/.deps/svm.Plo ViennaRNA-2.5.0/src/libsvm-3.25/svm.def ViennaRNA-2.5.0/src/libsvm-3.25/FAQ.html ViennaRNA-2.5.0/src/libsvm-3.25/svm-toy/ ViennaRNA-2.5.0/src/libsvm-3.25/svm-toy/qt/ ViennaRNA-2.5.0/src/libsvm-3.25/svm-toy/qt/Makefile ViennaRNA-2.5.0/src/libsvm-3.25/svm-toy/qt/svm-toy.cpp ViennaRNA-2.5.0/src/libsvm-3.25/svm-toy/windows/ ViennaRNA-2.5.0/src/libsvm-3.25/svm-toy/windows/svm-toy.cpp ViennaRNA-2.5.0/src/libsvm-3.25/python/ ViennaRNA-2.5.0/src/libsvm-3.25/python/Makefile ViennaRNA-2.5.0/src/libsvm-3.25/python/README ViennaRNA-2.5.0/src/libsvm-3.25/python/MANIFEST.in ViennaRNA-2.5.0/src/libsvm-3.25/python/setup.py ViennaRNA-2.5.0/src/libsvm-3.25/python/libsvm/ ViennaRNA-2.5.0/src/libsvm-3.25/python/libsvm/__init__.py ViennaRNA-2.5.0/src/libsvm-3.25/python/libsvm/svm.py ViennaRNA-2.5.0/src/libsvm-3.25/python/libsvm/commonutil.py ViennaRNA-2.5.0/src/libsvm-3.25/python/libsvm/svmutil.py ViennaRNA-2.5.0/src/libsvm-3.25/svm-predict.c ViennaRNA-2.5.0/src/libsvm-3.25/matlab/ ViennaRNA-2.5.0/src/libsvm-3.25/matlab/Makefile ViennaRNA-2.5.0/src/libsvm-3.25/matlab/libsvmread.c ViennaRNA-2.5.0/src/libsvm-3.25/matlab/svmtrain.c ViennaRNA-2.5.0/src/libsvm-3.25/matlab/make.m ViennaRNA-2.5.0/src/libsvm-3.25/matlab/svm_model_matlab.h ViennaRNA-2.5.0/src/libsvm-3.25/matlab/libsvmwrite.c ViennaRNA-2.5.0/src/libsvm-3.25/matlab/svm_model_matlab.c ViennaRNA-2.5.0/src/libsvm-3.25/matlab/README ViennaRNA-2.5.0/src/libsvm-3.25/matlab/svmpredict.c ViennaRNA-2.5.0/src/libsvm-3.25/svm-scale.c ViennaRNA-2.5.0/src/libsvm-3.25/svm.cpp ViennaRNA-2.5.0/src/libsvm-3.25/tools/ ViennaRNA-2.5.0/src/libsvm-3.25/tools/grid.py ViennaRNA-2.5.0/src/libsvm-3.25/tools/checkdata.py ViennaRNA-2.5.0/src/libsvm-3.25/tools/subset.py ViennaRNA-2.5.0/src/libsvm-3.25/tools/easy.py ViennaRNA-2.5.0/src/libsvm-3.25/tools/README ViennaRNA-2.5.0/src/libsvm-3.25/heart_scale ViennaRNA-2.5.0/src/libsvm-3.25/README ViennaRNA-2.5.0/src/libsvm-3.25/svm.h ViennaRNA-2.5.0/src/libsvm-3.25/windows/ ViennaRNA-2.5.0/src/libsvm-3.25/windows/libsvm.dll ViennaRNA-2.5.0/src/libsvm-3.25/windows/svm-predict.exe ViennaRNA-2.5.0/src/libsvm-3.25/windows/svm-toy.exe ViennaRNA-2.5.0/src/libsvm-3.25/windows/svm-train.exe ViennaRNA-2.5.0/src/libsvm-3.25/windows/libsvmread.mexw64 ViennaRNA-2.5.0/src/libsvm-3.25/windows/libsvmwrite.mexw64 ViennaRNA-2.5.0/src/libsvm-3.25/windows/svmtrain.mexw64 ViennaRNA-2.5.0/src/libsvm-3.25/windows/svm-scale.exe ViennaRNA-2.5.0/src/libsvm-3.25/windows/svmpredict.mexw64 ViennaRNA-2.5.0/src/libsvm-3.25/java/ ViennaRNA-2.5.0/src/libsvm-3.25/java/Makefile ViennaRNA-2.5.0/src/libsvm-3.25/java/svm_train.java ViennaRNA-2.5.0/src/libsvm-3.25/java/libsvm.jar ViennaRNA-2.5.0/src/libsvm-3.25/java/test_applet.html ViennaRNA-2.5.0/src/libsvm-3.25/java/svm_scale.java ViennaRNA-2.5.0/src/libsvm-3.25/java/svm_toy.java ViennaRNA-2.5.0/src/libsvm-3.25/java/libsvm/ ViennaRNA-2.5.0/src/libsvm-3.25/java/libsvm/svm_problem.java ViennaRNA-2.5.0/src/libsvm-3.25/java/libsvm/svm.java ViennaRNA-2.5.0/src/libsvm-3.25/java/libsvm/svm_print_interface.java ViennaRNA-2.5.0/src/libsvm-3.25/java/libsvm/svm_model.java ViennaRNA-2.5.0/src/libsvm-3.25/java/libsvm/svm_node.java ViennaRNA-2.5.0/src/libsvm-3.25/java/libsvm/svm.m4 ViennaRNA-2.5.0/src/libsvm-3.25/java/libsvm/svm_parameter.java ViennaRNA-2.5.0/src/libsvm-3.25/java/svm_predict.java ViennaRNA-2.5.0/src/libsvm-3.25/COPYRIGHT ViennaRNA-2.5.0/src/libsvm-3.25/svm-train.c ViennaRNA-2.5.0/src/bin/ ViennaRNA-2.5.0/src/bin/Makefile.am ViennaRNA-2.5.0/src/bin/RNAduplex_cmdl.c ViennaRNA-2.5.0/src/bin/RNAfold_cmdl.c ViennaRNA-2.5.0/src/bin/RNAalifold_cmdl.h ViennaRNA-2.5.0/src/bin/RNAmultifold_cmdl.c ViennaRNA-2.5.0/src/bin/RNAsnoop.ggo ViennaRNA-2.5.0/src/bin/RNAsubopt_cmdl.h ViennaRNA-2.5.0/src/bin/RNAdistance.ggo ViennaRNA-2.5.0/src/bin/RNALfold.c ViennaRNA-2.5.0/src/bin/RNAcofold.ggo ViennaRNA-2.5.0/src/bin/RNAsubopt.c ViennaRNA-2.5.0/src/bin/RNALalifold.c ViennaRNA-2.5.0/src/bin/RNApaln_cmdl.c ViennaRNA-2.5.0/src/bin/RNApdist_cmdl.h ViennaRNA-2.5.0/src/bin/RNAplot_cmdl.h ViennaRNA-2.5.0/src/bin/RNAdos.ggo ViennaRNA-2.5.0/src/bin/RNAheat_cmdl.c ViennaRNA-2.5.0/src/bin/RNAaliduplex.ggo ViennaRNA-2.5.0/src/bin/RNApaln.c ViennaRNA-2.5.0/src/bin/RNAinverse.ggo ViennaRNA-2.5.0/src/bin/RNAduplex_cmdl.h ViennaRNA-2.5.0/src/bin/RNAplfold_cmdl.h ViennaRNA-2.5.0/src/bin/RNApvmin.ggo ViennaRNA-2.5.0/src/bin/RNAplex_cmdl.c ViennaRNA-2.5.0/src/bin/RNAeval.c ViennaRNA-2.5.0/src/bin/RNA2Dfold_cmdl.h ViennaRNA-2.5.0/src/bin/input_id_helpers.h ViennaRNA-2.5.0/src/bin/RNAup_cmdl.h ViennaRNA-2.5.0/src/bin/RNAsnoop_cmdl.h ViennaRNA-2.5.0/src/bin/RNAaliduplex.c ViennaRNA-2.5.0/src/bin/RNALfold_cmdl.c ViennaRNA-2.5.0/src/bin/RNALfold_cmdl.h ViennaRNA-2.5.0/src/bin/RNAdos.c ViennaRNA-2.5.0/src/bin/RNALalifold.ggo ViennaRNA-2.5.0/src/bin/RNApdist.c ViennaRNA-2.5.0/src/bin/RNAdos_cmdl.h ViennaRNA-2.5.0/src/bin/Makefile.in ViennaRNA-2.5.0/src/bin/RNAaliduplex_cmdl.c ViennaRNA-2.5.0/src/bin/RNAeval_cmdl.c ViennaRNA-2.5.0/src/bin/RNAsnoop_cmdl.c ViennaRNA-2.5.0/src/bin/RNAparconv_cmdl.h ViennaRNA-2.5.0/src/bin/RNAplex_cmdl.h ViennaRNA-2.5.0/src/bin/RNAdistance_cmdl.h ViennaRNA-2.5.0/src/bin/RNAPKplex_cmdl.h ViennaRNA-2.5.0/src/bin/RNApdist_cmdl.c ViennaRNA-2.5.0/src/bin/RNAcofold_cmdl.c ViennaRNA-2.5.0/src/bin/RNAmultifold.ggo ViennaRNA-2.5.0/src/bin/RNAPKplex_cmdl.c ViennaRNA-2.5.0/src/bin/RNAalifold_cmdl.c ViennaRNA-2.5.0/src/bin/RNA2Dfold.c ViennaRNA-2.5.0/src/bin/RNAcofold_cmdl.h ViennaRNA-2.5.0/src/bin/RNAduplex.ggo ViennaRNA-2.5.0/src/bin/RNAup.c ViennaRNA-2.5.0/src/bin/RNAinverse_cmdl.c ViennaRNA-2.5.0/src/bin/RNAfold_cmdl.h ViennaRNA-2.5.0/src/bin/RNApdist.ggo ViennaRNA-2.5.0/src/bin/RNAcofold.c ViennaRNA-2.5.0/src/bin/RNAparconv_cmdl.c ViennaRNA-2.5.0/src/bin/RNAplex.c ViennaRNA-2.5.0/src/bin/RNALfold.ggo ViennaRNA-2.5.0/src/bin/input_id_helpers.c ViennaRNA-2.5.0/src/bin/RNApvmin_cmdl.c ViennaRNA-2.5.0/src/bin/RNAplfold_cmdl.c ViennaRNA-2.5.0/src/bin/RNAsubopt_cmdl.c ViennaRNA-2.5.0/src/bin/RNAplex.ggo ViennaRNA-2.5.0/src/bin/RNAparconv.c ViennaRNA-2.5.0/src/bin/RNAalifold.c ViennaRNA-2.5.0/src/bin/RNAheat.c ViennaRNA-2.5.0/src/bin/RNAfold.c ViennaRNA-2.5.0/src/bin/RNA2Dfold.ggo ViennaRNA-2.5.0/src/bin/RNAheat_cmdl.h ViennaRNA-2.5.0/src/bin/RNAdistance.c ViennaRNA-2.5.0/src/bin/RNAaliduplex_cmdl.h ViennaRNA-2.5.0/src/bin/RNAplfold.ggo ViennaRNA-2.5.0/src/bin/RNAmultifold_cmdl.h ViennaRNA-2.5.0/src/bin/RNApaln.ggo ViennaRNA-2.5.0/src/bin/RNALalifold_cmdl.c ViennaRNA-2.5.0/src/bin/gengetopt_helper.h ViennaRNA-2.5.0/src/bin/RNAdos_cmdl.c ViennaRNA-2.5.0/src/bin/RNAPKplex.ggo ViennaRNA-2.5.0/src/bin/RNA2Dfold_cmdl.c ViennaRNA-2.5.0/src/bin/RNAeval_cmdl.h ViennaRNA-2.5.0/src/bin/RNAplot.ggo ViennaRNA-2.5.0/src/bin/RNAplot_cmdl.c ViennaRNA-2.5.0/src/bin/RNAinverse_cmdl.h ViennaRNA-2.5.0/src/bin/RNAalifold.ggo ViennaRNA-2.5.0/src/bin/RNAfold.ggo ViennaRNA-2.5.0/src/bin/RNApaln_cmdl.h ViennaRNA-2.5.0/src/bin/RNAup.ggo ViennaRNA-2.5.0/src/bin/RNAheat.ggo ViennaRNA-2.5.0/src/bin/RNAmultifold.c ViennaRNA-2.5.0/src/bin/RNAsubopt.ggo ViennaRNA-2.5.0/src/bin/RNAplot.c ViennaRNA-2.5.0/src/bin/parallel_helpers.h ViennaRNA-2.5.0/src/bin/RNALalifold_cmdl.h ViennaRNA-2.5.0/src/bin/RNAsnoop.c ViennaRNA-2.5.0/src/bin/parallel_helpers.c ViennaRNA-2.5.0/src/bin/RNAplfold.c ViennaRNA-2.5.0/src/bin/RNAup_cmdl.c ViennaRNA-2.5.0/src/bin/RNAinverse.c ViennaRNA-2.5.0/src/bin/RNAPKplex.c ViennaRNA-2.5.0/src/bin/RNApvmin.c ViennaRNA-2.5.0/src/bin/RNAduplex.c ViennaRNA-2.5.0/src/bin/RNApvmin_cmdl.h ViennaRNA-2.5.0/src/bin/RNAparconv.ggo ViennaRNA-2.5.0/src/bin/RNAeval.ggo ViennaRNA-2.5.0/src/bin/RNAdistance_cmdl.c ViennaRNA-2.5.0/src/ViennaRNA/ ViennaRNA-2.5.0/src/ViennaRNA/Makefile.am ViennaRNA-2.5.0/src/ViennaRNA/plex.h ViennaRNA-2.5.0/src/ViennaRNA/datastructures/ ViennaRNA-2.5.0/src/ViennaRNA/datastructures/hash_tables.c ViennaRNA-2.5.0/src/ViennaRNA/datastructures/heap.c ViennaRNA-2.5.0/src/ViennaRNA/datastructures/char_stream.h ViennaRNA-2.5.0/src/ViennaRNA/datastructures/lists.h ViennaRNA-2.5.0/src/ViennaRNA/datastructures/char_stream.c ViennaRNA-2.5.0/src/ViennaRNA/datastructures/heap.h ViennaRNA-2.5.0/src/ViennaRNA/datastructures/lists.c ViennaRNA-2.5.0/src/ViennaRNA/datastructures/basic.h ViennaRNA-2.5.0/src/ViennaRNA/datastructures/stream_output.c ViennaRNA-2.5.0/src/ViennaRNA/datastructures/hash_tables.h ViennaRNA-2.5.0/src/ViennaRNA/datastructures/stream_output.h ViennaRNA-2.5.0/src/ViennaRNA/datastructures/basic_datastructures.c ViennaRNA-2.5.0/src/ViennaRNA/fold_compound.c ViennaRNA-2.5.0/src/ViennaRNA/energy_const.h ViennaRNA-2.5.0/src/ViennaRNA/subopt.c ViennaRNA-2.5.0/src/ViennaRNA/zscore.h ViennaRNA-2.5.0/src/ViennaRNA/params/ ViennaRNA-2.5.0/src/ViennaRNA/params/io.c ViennaRNA-2.5.0/src/ViennaRNA/params/default.h ViennaRNA-2.5.0/src/ViennaRNA/params/intl22dH.h ViennaRNA-2.5.0/src/ViennaRNA/params/intl21dH.h ViennaRNA-2.5.0/src/ViennaRNA/params/constants.h ViennaRNA-2.5.0/src/ViennaRNA/params/1.8.4_intloops.h ViennaRNA-2.5.0/src/ViennaRNA/params/io.h ViennaRNA-2.5.0/src/ViennaRNA/params/1.8.4_epars.h ViennaRNA-2.5.0/src/ViennaRNA/params/params.c ViennaRNA-2.5.0/src/ViennaRNA/params/default.c ViennaRNA-2.5.0/src/ViennaRNA/params/convert.c ViennaRNA-2.5.0/src/ViennaRNA/params/basic.h ViennaRNA-2.5.0/src/ViennaRNA/params/convert.h ViennaRNA-2.5.0/src/ViennaRNA/params/svm_model_sd.inc ViennaRNA-2.5.0/src/ViennaRNA/params/intl22.h ViennaRNA-2.5.0/src/ViennaRNA/params/intl11dH.h ViennaRNA-2.5.0/src/ViennaRNA/params/intl21.h ViennaRNA-2.5.0/src/ViennaRNA/params/intl11.h ViennaRNA-2.5.0/src/ViennaRNA/params/svm_model_avg.inc ViennaRNA-2.5.0/src/ViennaRNA/LPfold.c ViennaRNA-2.5.0/src/ViennaRNA/interior_loops.h ViennaRNA-2.5.0/src/ViennaRNA/mfe_window.h ViennaRNA-2.5.0/src/ViennaRNA/heat_capacity.c ViennaRNA-2.5.0/src/ViennaRNA/stringdist.c ViennaRNA-2.5.0/src/ViennaRNA/concentrations.c ViennaRNA-2.5.0/src/ViennaRNA/mfe_window.c ViennaRNA-2.5.0/src/ViennaRNA/concentrations.h ViennaRNA-2.5.0/src/ViennaRNA/2Dpfold.h ViennaRNA-2.5.0/src/ViennaRNA/ugly_bt.h ViennaRNA-2.5.0/src/ViennaRNA/RNAstruct.h ViennaRNA-2.5.0/src/ViennaRNA/data_structures.h ViennaRNA-2.5.0/src/ViennaRNA/unstructured_domains.c ViennaRNA-2.5.0/src/ViennaRNA/equilibrium_probs.c ViennaRNA-2.5.0/src/ViennaRNA/part_func_co.c ViennaRNA-2.5.0/src/ViennaRNA/structure_utils.h ViennaRNA-2.5.0/src/ViennaRNA/part_func_up.h ViennaRNA-2.5.0/src/ViennaRNA/duplex.c ViennaRNA-2.5.0/src/ViennaRNA/data_structures_nonred.inc ViennaRNA-2.5.0/src/ViennaRNA/file_formats.h ViennaRNA-2.5.0/src/ViennaRNA/utils.h ViennaRNA-2.5.0/src/ViennaRNA/mfe.c ViennaRNA-2.5.0/src/ViennaRNA/model.h ViennaRNA-2.5.0/src/ViennaRNA/mfe.h ViennaRNA-2.5.0/src/ViennaRNA/treedist.c ViennaRNA-2.5.0/src/ViennaRNA/snofold.h ViennaRNA-2.5.0/src/ViennaRNA/svm_utils.h ViennaRNA-2.5.0/src/ViennaRNA/Lfold.h ViennaRNA-2.5.0/src/ViennaRNA/model.c ViennaRNA-2.5.0/src/ViennaRNA/bs_wrappers.c ViennaRNA-2.5.0/src/ViennaRNA/dp_matrices.h ViennaRNA-2.5.0/src/ViennaRNA/grammar.c ViennaRNA-2.5.0/src/ViennaRNA/ProfileAln.h ViennaRNA-2.5.0/src/ViennaRNA/list.h ViennaRNA-2.5.0/src/ViennaRNA/sequence.c ViennaRNA-2.5.0/src/ViennaRNA/combinatorics.h ViennaRNA-2.5.0/src/ViennaRNA/pf_multifold.c ViennaRNA-2.5.0/src/ViennaRNA/perturbation_fold.h ViennaRNA-2.5.0/src/ViennaRNA/params.h ViennaRNA-2.5.0/src/ViennaRNA/plot_structure.h ViennaRNA-2.5.0/src/ViennaRNA/part_func_window.h ViennaRNA-2.5.0/src/ViennaRNA/cofold.h ViennaRNA-2.5.0/src/ViennaRNA/MEA.h ViennaRNA-2.5.0/src/ViennaRNA/alipfold.c ViennaRNA-2.5.0/src/ViennaRNA/profiledist.h ViennaRNA-2.5.0/src/ViennaRNA/eval.c ViennaRNA-2.5.0/src/ViennaRNA/move_set.c ViennaRNA-2.5.0/src/ViennaRNA/dist_vars.c ViennaRNA-2.5.0/src/ViennaRNA/snoop.c ViennaRNA-2.5.0/src/ViennaRNA/snoop.h ViennaRNA-2.5.0/src/ViennaRNA/plot_utils.h ViennaRNA-2.5.0/src/ViennaRNA/zscore.c ViennaRNA-2.5.0/src/ViennaRNA/walk.h ViennaRNA-2.5.0/src/ViennaRNA/constraints_hard.h ViennaRNA-2.5.0/src/ViennaRNA/zscore_dat.inc ViennaRNA-2.5.0/src/ViennaRNA/cofold.c ViennaRNA-2.5.0/src/ViennaRNA/constraints.h ViennaRNA-2.5.0/src/ViennaRNA/alphabet.c ViennaRNA-2.5.0/src/ViennaRNA/neighbor.h ViennaRNA-2.5.0/src/ViennaRNA/alifold.c ViennaRNA-2.5.0/src/ViennaRNA/vrna_config.h.in ViennaRNA-2.5.0/src/ViennaRNA/char_stream.h ViennaRNA-2.5.0/src/ViennaRNA/plex_functions.c ViennaRNA-2.5.0/src/ViennaRNA/landscape/ ViennaRNA-2.5.0/src/ViennaRNA/landscape/walk.c ViennaRNA-2.5.0/src/ViennaRNA/landscape/walk.h ViennaRNA-2.5.0/src/ViennaRNA/landscape/neighbor.h ViennaRNA-2.5.0/src/ViennaRNA/landscape/local_neighbors.inc ViennaRNA-2.5.0/src/ViennaRNA/landscape/move.h ViennaRNA-2.5.0/src/ViennaRNA/landscape/neighbor.c ViennaRNA-2.5.0/src/ViennaRNA/landscape/findpath.c ViennaRNA-2.5.0/src/ViennaRNA/landscape/move.c ViennaRNA-2.5.0/src/ViennaRNA/landscape/findpath.h ViennaRNA-2.5.0/src/ViennaRNA/landscape/paths.h ViennaRNA-2.5.0/src/ViennaRNA/MEA.c ViennaRNA-2.5.0/src/ViennaRNA/Makefile.in ViennaRNA-2.5.0/src/ViennaRNA/part_func_co.h ViennaRNA-2.5.0/src/ViennaRNA/constraints_ligand.h ViennaRNA-2.5.0/src/ViennaRNA/fold_compound.h ViennaRNA-2.5.0/src/ViennaRNA/exterior_loops.h ViennaRNA-2.5.0/src/ViennaRNA/file_formats_msa.h ViennaRNA-2.5.0/src/ViennaRNA/centroid.c ViennaRNA-2.5.0/src/ViennaRNA/treedist.h ViennaRNA-2.5.0/src/ViennaRNA/color_output.inc ViennaRNA-2.5.0/src/ViennaRNA/loop_energies.h ViennaRNA-2.5.0/src/ViennaRNA/dp_matrices.c ViennaRNA-2.5.0/src/ViennaRNA/unstructured_domains.h ViennaRNA-2.5.0/src/ViennaRNA/plotting/ ViennaRNA-2.5.0/src/ViennaRNA/plotting/alignments.c ViennaRNA-2.5.0/src/ViennaRNA/plotting/plot_utils.c ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/ ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/RNAturtle.c ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/RNAturtle.h ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/includes/ ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/includes/rotationAngle.inc ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/includes/intersectLevelLines.inc ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/includes/intersectLevelBoundingBoxes.inc ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/includes/postscriptArcs.inc ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/includes/boundingBoxes.inc ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/includes/definitions.inc ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/includes/intersectLevelTreeNodes.inc ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/includes/drawingconfig.inc ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/includes/resolveExteriorChildIntersections.inc ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/includes/svgArcs.inc ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/includes/handleAncestorIntersections.inc ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/includes/intersectionType.inc ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/includes/optimize.inc ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/includes/vector_math.inc ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/includes/resolveIntersections.inc ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/includes/calcDeltas.inc ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/includes/coordinates.inc ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/includes/configtree.inc ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/includes/handleConfigChanges.inc ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/includes/boundingWedge.inc ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/includes/handleSiblingIntersections.inc ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/RNApuzzler.h ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/headers/ ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/headers/configtree_struct.h ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/headers/configArc_struct.h ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/headers/boundingBoxes_struct.h ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/headers/tBaseInformation_struct.h ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/headers/config_struct.h ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/headers/AABB_struct.h ViennaRNA-2.5.0/src/ViennaRNA/plotting/RNApuzzler/RNApuzzler.c ViennaRNA-2.5.0/src/ViennaRNA/plotting/svg_helpers.inc ViennaRNA-2.5.0/src/ViennaRNA/plotting/utils.h ViennaRNA-2.5.0/src/ViennaRNA/plotting/naview.c ViennaRNA-2.5.0/src/ViennaRNA/plotting/alignments.h ViennaRNA-2.5.0/src/ViennaRNA/plotting/structures.c ViennaRNA-2.5.0/src/ViennaRNA/plotting/ps_helpers.inc ViennaRNA-2.5.0/src/ViennaRNA/plotting/probabilities.h ViennaRNA-2.5.0/src/ViennaRNA/plotting/structures.h ViennaRNA-2.5.0/src/ViennaRNA/plotting/naview.h ViennaRNA-2.5.0/src/ViennaRNA/plotting/layouts.c ViennaRNA-2.5.0/src/ViennaRNA/plotting/layouts.h ViennaRNA-2.5.0/src/ViennaRNA/plotting/probabilities.c ViennaRNA-2.5.0/src/ViennaRNA/ribo.c ViennaRNA-2.5.0/src/ViennaRNA/subopt_zuker.c ViennaRNA-2.5.0/src/ViennaRNA/special_const.h ViennaRNA-2.5.0/src/ViennaRNA/eval_wrappers.c ViennaRNA-2.5.0/src/ViennaRNA/naview.h ViennaRNA-2.5.0/src/ViennaRNA/ProfileDist.c ViennaRNA-2.5.0/src/ViennaRNA/fold_vars.h ViennaRNA-2.5.0/src/ViennaRNA/edit_cost.h ViennaRNA-2.5.0/src/ViennaRNA/plot_aln.h ViennaRNA-2.5.0/src/ViennaRNA/Lfold.c ViennaRNA-2.5.0/src/ViennaRNA/fold.h ViennaRNA-2.5.0/src/ViennaRNA/multibranch_loops.h ViennaRNA-2.5.0/src/ViennaRNA/PKplex.h ViennaRNA-2.5.0/src/ViennaRNA/special_const.c ViennaRNA-2.5.0/src/ViennaRNA/dist_vars.h ViennaRNA-2.5.0/src/ViennaRNA/equilibrium_probs.h ViennaRNA-2.5.0/src/ViennaRNA/move_set.h ViennaRNA-2.5.0/src/ViennaRNA/PS_dot.h ViennaRNA-2.5.0/src/ViennaRNA/structured_domains.h ViennaRNA-2.5.0/src/ViennaRNA/pf_fold.c ViennaRNA-2.5.0/src/ViennaRNA/commands.c ViennaRNA-2.5.0/src/ViennaRNA/perturbation_fold.c ViennaRNA-2.5.0/src/ViennaRNA/mm.h ViennaRNA-2.5.0/src/ViennaRNA/pk_plex.h ViennaRNA-2.5.0/src/ViennaRNA/plex.c ViennaRNA-2.5.0/src/ViennaRNA/search/ ViennaRNA-2.5.0/src/ViennaRNA/search/BoyerMoore.c ViennaRNA-2.5.0/src/ViennaRNA/search/BoyerMoore.h ViennaRNA-2.5.0/src/ViennaRNA/part_func_wrappers.c ViennaRNA-2.5.0/src/ViennaRNA/convert_epars.h ViennaRNA-2.5.0/src/ViennaRNA/wrap_dlib.h ViennaRNA-2.5.0/src/ViennaRNA/fold.c ViennaRNA-2.5.0/src/ViennaRNA/sequence.h ViennaRNA-2.5.0/src/ViennaRNA/RNAstruct.c ViennaRNA-2.5.0/src/ViennaRNA/units.h ViennaRNA-2.5.0/src/ViennaRNA/stringdist.h ViennaRNA-2.5.0/src/ViennaRNA/string_utils.h ViennaRNA-2.5.0/src/ViennaRNA/c_plex.c ViennaRNA-2.5.0/src/ViennaRNA/duplex.h ViennaRNA-2.5.0/src/ViennaRNA/grammar.h ViennaRNA-2.5.0/src/ViennaRNA/io/ ViennaRNA-2.5.0/src/ViennaRNA/io/file_formats.h ViennaRNA-2.5.0/src/ViennaRNA/io/utils.h ViennaRNA-2.5.0/src/ViennaRNA/io/file_formats_msa.h ViennaRNA-2.5.0/src/ViennaRNA/io/io_utils.c ViennaRNA-2.5.0/src/ViennaRNA/io/file_formats.c ViennaRNA-2.5.0/src/ViennaRNA/io/file_formats_msa.c ViennaRNA-2.5.0/src/ViennaRNA/boltzmann_sampling.h ViennaRNA-2.5.0/src/ViennaRNA/ugly_bt.c ViennaRNA-2.5.0/src/ViennaRNA/inverse.c ViennaRNA-2.5.0/src/ViennaRNA/energy_par.h ViennaRNA-2.5.0/src/ViennaRNA/read_epars.h ViennaRNA-2.5.0/src/ViennaRNA/static/ ViennaRNA-2.5.0/src/ViennaRNA/static/Makefile.am ViennaRNA-2.5.0/src/ViennaRNA/static/energy_parameter_sets.h.in ViennaRNA-2.5.0/src/ViennaRNA/static/postscript/ ViennaRNA-2.5.0/src/ViennaRNA/static/postscript/dot_plot_macro_sd.hex ViennaRNA-2.5.0/src/ViennaRNA/static/postscript/structure_plot_macro_base.ps ViennaRNA-2.5.0/src/ViennaRNA/static/postscript/aln_macro_base.hex ViennaRNA-2.5.0/src/ViennaRNA/static/postscript/dot_plot_macro_linear_data.ps ViennaRNA-2.5.0/src/ViennaRNA/static/postscript/dot_plot_macro_linear_data.hex ViennaRNA-2.5.0/src/ViennaRNA/static/postscript/dot_plot_macro_base.hex ViennaRNA-2.5.0/src/ViennaRNA/static/postscript/dot_plot_macro_sd.ps ViennaRNA-2.5.0/src/ViennaRNA/static/postscript/dot_plot_macro_sc_motifs.ps ViennaRNA-2.5.0/src/ViennaRNA/static/postscript/dot_plot_macro_turn.hex ViennaRNA-2.5.0/src/ViennaRNA/static/postscript/dot_plot_macro_base.ps ViennaRNA-2.5.0/src/ViennaRNA/static/postscript/dot_plot_macro_ud.hex ViennaRNA-2.5.0/src/ViennaRNA/static/postscript/dot_plot_macro_sc_motifs.hex ViennaRNA-2.5.0/src/ViennaRNA/static/postscript/dot_plot_macro_turn.ps ViennaRNA-2.5.0/src/ViennaRNA/static/postscript/structure_plot_macro_base.hex ViennaRNA-2.5.0/src/ViennaRNA/static/postscript/aln_macro_base.ps ViennaRNA-2.5.0/src/ViennaRNA/static/postscript/dot_plot_macro_ud.ps ViennaRNA-2.5.0/src/ViennaRNA/static/postscript/structure_plot_macro_extras.ps ViennaRNA-2.5.0/src/ViennaRNA/static/postscript/structure_plot_macro_extras.hex ViennaRNA-2.5.0/src/ViennaRNA/static/misc/ ViennaRNA-2.5.0/src/ViennaRNA/static/misc/dna_mathews1999.hex ViennaRNA-2.5.0/src/ViennaRNA/static/misc/rna_langdon2018.hex ViennaRNA-2.5.0/src/ViennaRNA/static/misc/rna_turner2004.hex ViennaRNA-2.5.0/src/ViennaRNA/static/misc/dna_mathews2004.hex ViennaRNA-2.5.0/src/ViennaRNA/static/misc/rna_misc_special_hairpins.hex ViennaRNA-2.5.0/src/ViennaRNA/static/misc/rna_andronescu2007.hex ViennaRNA-2.5.0/src/ViennaRNA/static/misc/rna_turner1999.hex ViennaRNA-2.5.0/src/ViennaRNA/static/Makefile.in ViennaRNA-2.5.0/src/ViennaRNA/static/templates_svg.h ViennaRNA-2.5.0/src/ViennaRNA/static/templates_postscript.h.in ViennaRNA-2.5.0/src/ViennaRNA/static/templates_svg.h.in ViennaRNA-2.5.0/src/ViennaRNA/static/energy_parameter_sets.h ViennaRNA-2.5.0/src/ViennaRNA/static/svg_templates.txt ViennaRNA-2.5.0/src/ViennaRNA/static/svg/ ViennaRNA-2.5.0/src/ViennaRNA/static/svg/structure_plot_footer.svg ViennaRNA-2.5.0/src/ViennaRNA/static/svg/structure_plot_header.svg ViennaRNA-2.5.0/src/ViennaRNA/static/svg/structure_plot_footer.hex ViennaRNA-2.5.0/src/ViennaRNA/static/svg/structure_plot_header.hex ViennaRNA-2.5.0/src/ViennaRNA/static/templates_postscript.h ViennaRNA-2.5.0/src/ViennaRNA/static/ps_templates.txt ViennaRNA-2.5.0/src/ViennaRNA/part_func_up.c ViennaRNA-2.5.0/src/ViennaRNA/subopt.h ViennaRNA-2.5.0/src/ViennaRNA/constraints_SHAPE.h ViennaRNA-2.5.0/src/ViennaRNA/part_func.h ViennaRNA-2.5.0/src/ViennaRNA/ali_plex.h ViennaRNA-2.5.0/src/ViennaRNA/heat_capacity.h ViennaRNA-2.5.0/src/ViennaRNA/eval.h ViennaRNA-2.5.0/src/ViennaRNA/subopt_zuker.h ViennaRNA-2.5.0/src/ViennaRNA/utils/ ViennaRNA-2.5.0/src/ViennaRNA/utils/utils.c ViennaRNA-2.5.0/src/ViennaRNA/utils/msa_utils.c ViennaRNA-2.5.0/src/ViennaRNA/utils/cpu.h ViennaRNA-2.5.0/src/ViennaRNA/utils/higher_order_functions.c ViennaRNA-2.5.0/src/ViennaRNA/utils/higher_order_functions_avx512.c ViennaRNA-2.5.0/src/ViennaRNA/utils/svm_utils.c ViennaRNA-2.5.0/src/ViennaRNA/utils/alignments.h ViennaRNA-2.5.0/src/ViennaRNA/utils/string_utils.c ViennaRNA-2.5.0/src/ViennaRNA/utils/strings.h ViennaRNA-2.5.0/src/ViennaRNA/utils/structures.h ViennaRNA-2.5.0/src/ViennaRNA/utils/higher_order_functions_sse41.c ViennaRNA-2.5.0/src/ViennaRNA/utils/basic.h ViennaRNA-2.5.0/src/ViennaRNA/utils/structure_utils.c ViennaRNA-2.5.0/src/ViennaRNA/utils/units.h ViennaRNA-2.5.0/src/ViennaRNA/utils/units.c ViennaRNA-2.5.0/src/ViennaRNA/utils/structure_tree.c ViennaRNA-2.5.0/src/ViennaRNA/utils/svm.h ViennaRNA-2.5.0/src/ViennaRNA/utils/cpu.c ViennaRNA-2.5.0/src/ViennaRNA/utils/higher_order_functions.h ViennaRNA-2.5.0/src/ViennaRNA/loops/ ViennaRNA-2.5.0/src/ViennaRNA/loops/hairpin.h ViennaRNA-2.5.0/src/ViennaRNA/loops/hairpin_bt.c ViennaRNA-2.5.0/src/ViennaRNA/loops/multibranch.c ViennaRNA-2.5.0/src/ViennaRNA/loops/external_sc.inc ViennaRNA-2.5.0/src/ViennaRNA/loops/external_bt.c ViennaRNA-2.5.0/src/ViennaRNA/loops/multibranch_sc_pf.inc ViennaRNA-2.5.0/src/ViennaRNA/loops/hairpin_hc.inc ViennaRNA-2.5.0/src/ViennaRNA/loops/internal.h ViennaRNA-2.5.0/src/ViennaRNA/loops/hairpin_sc_pf.inc ViennaRNA-2.5.0/src/ViennaRNA/loops/hairpin_sc.inc ViennaRNA-2.5.0/src/ViennaRNA/loops/external.c ViennaRNA-2.5.0/src/ViennaRNA/loops/multibranch_pf.c ViennaRNA-2.5.0/src/ViennaRNA/loops/internal_sc_pf.inc ViennaRNA-2.5.0/src/ViennaRNA/loops/external_hc.inc ViennaRNA-2.5.0/src/ViennaRNA/loops/hairpin.c ViennaRNA-2.5.0/src/ViennaRNA/loops/multibranch_bt.c ViennaRNA-2.5.0/src/ViennaRNA/loops/multibranch.h ViennaRNA-2.5.0/src/ViennaRNA/loops/internal_hc.inc ViennaRNA-2.5.0/src/ViennaRNA/loops/internal_sc.inc ViennaRNA-2.5.0/src/ViennaRNA/loops/internal_bt.c ViennaRNA-2.5.0/src/ViennaRNA/loops/internal.c ViennaRNA-2.5.0/src/ViennaRNA/loops/external_pf.c ViennaRNA-2.5.0/src/ViennaRNA/loops/external_sc_pf.inc ViennaRNA-2.5.0/src/ViennaRNA/loops/external.h ViennaRNA-2.5.0/src/ViennaRNA/loops/multibranch_hc.inc ViennaRNA-2.5.0/src/ViennaRNA/loops/all.h ViennaRNA-2.5.0/src/ViennaRNA/loops/hairpin_pf.c ViennaRNA-2.5.0/src/ViennaRNA/loops/internal_pf.c ViennaRNA-2.5.0/src/ViennaRNA/loops/multibranch_sc.inc ViennaRNA-2.5.0/src/ViennaRNA/LPfold.h ViennaRNA-2.5.0/src/ViennaRNA/stream_output.h ViennaRNA-2.5.0/src/ViennaRNA/mfe_window_wrappers.c ViennaRNA-2.5.0/src/ViennaRNA/centroid.h ViennaRNA-2.5.0/src/ViennaRNA/mfe_wrappers.c ViennaRNA-2.5.0/src/ViennaRNA/hairpin_loops.h ViennaRNA-2.5.0/src/ViennaRNA/snofold.c ViennaRNA-2.5.0/src/ViennaRNA/combinatorics.c ViennaRNA-2.5.0/src/ViennaRNA/mm.c ViennaRNA-2.5.0/src/ViennaRNA/alphabet.h ViennaRNA-2.5.0/src/ViennaRNA/2Dfold.h ViennaRNA-2.5.0/src/ViennaRNA/2Dfold.c ViennaRNA-2.5.0/src/ViennaRNA/gquad.c ViennaRNA-2.5.0/src/ViennaRNA/file_utils.h ViennaRNA-2.5.0/src/ViennaRNA/2Dpfold.c ViennaRNA-2.5.0/src/ViennaRNA/findpath.h ViennaRNA-2.5.0/src/ViennaRNA/wrap_dlib.cpp ViennaRNA-2.5.0/src/ViennaRNA/inverse.h ViennaRNA-2.5.0/src/ViennaRNA/ribo.h ViennaRNA-2.5.0/src/ViennaRNA/pair_mat.h ViennaRNA-2.5.0/src/ViennaRNA/alifold.h ViennaRNA-2.5.0/src/ViennaRNA/commands.h ViennaRNA-2.5.0/src/ViennaRNA/ProfileAln.c ViennaRNA-2.5.0/src/ViennaRNA/ali_plex.c ViennaRNA-2.5.0/src/ViennaRNA/boltzmann_sampling.c ViennaRNA-2.5.0/src/ViennaRNA/pf_multifold.h ViennaRNA-2.5.0/src/ViennaRNA/constraints/ ViennaRNA-2.5.0/src/ViennaRNA/constraints/ligand.h ViennaRNA-2.5.0/src/ViennaRNA/constraints/hard.h ViennaRNA-2.5.0/src/ViennaRNA/constraints/SHAPE.h ViennaRNA-2.5.0/src/ViennaRNA/constraints/SHAPE.c ViennaRNA-2.5.0/src/ViennaRNA/constraints/constraints.c ViennaRNA-2.5.0/src/ViennaRNA/constraints/soft.c ViennaRNA-2.5.0/src/ViennaRNA/constraints/hard.c ViennaRNA-2.5.0/src/ViennaRNA/constraints/ligand.c ViennaRNA-2.5.0/src/ViennaRNA/constraints/basic.h ViennaRNA-2.5.0/src/ViennaRNA/constraints/hc_depot.inc ViennaRNA-2.5.0/src/ViennaRNA/constraints/soft.h ViennaRNA-2.5.0/src/ViennaRNA/gquad.h ViennaRNA-2.5.0/src/ViennaRNA/plot_layouts.h ViennaRNA-2.5.0/src/ViennaRNA/part_func.c ViennaRNA-2.5.0/src/ViennaRNA/constraints_soft.h ViennaRNA-2.5.0/src/ViennaRNA/aln_util.h ViennaRNA-2.5.0/src/RNAlocmin/ ViennaRNA-2.5.0/src/RNAlocmin/Makefile.am ViennaRNA-2.5.0/src/RNAlocmin/hash_util.cpp ViennaRNA-2.5.0/src/RNAlocmin/AUTHORS ViennaRNA-2.5.0/src/RNAlocmin/flood.h ViennaRNA-2.5.0/src/RNAlocmin/configure ViennaRNA-2.5.0/src/RNAlocmin/ax_cxx_compile_stdcxx.m4 ViennaRNA-2.5.0/src/RNAlocmin/NEWS ViennaRNA-2.5.0/src/RNAlocmin/pknots.cpp ViennaRNA-2.5.0/src/RNAlocmin/move_set_pk.cpp ViennaRNA-2.5.0/src/RNAlocmin/findpath_pk.cpp ViennaRNA-2.5.0/src/RNAlocmin/barrier_tree.h ViennaRNA-2.5.0/src/RNAlocmin/globals.h ViennaRNA-2.5.0/src/RNAlocmin/aclocal.m4 ViennaRNA-2.5.0/src/RNAlocmin/main.cpp ViennaRNA-2.5.0/src/RNAlocmin/treeplot.cpp ViennaRNA-2.5.0/src/RNAlocmin/Makefile.in ViennaRNA-2.5.0/src/RNAlocmin/config.sub ViennaRNA-2.5.0/src/RNAlocmin/hash_util.h ViennaRNA-2.5.0/src/RNAlocmin/config.guess ViennaRNA-2.5.0/src/RNAlocmin/RNAlocmin.ggo ViennaRNA-2.5.0/src/RNAlocmin/RNAlocmin.h ViennaRNA-2.5.0/src/RNAlocmin/RNAlocmin.1 ViennaRNA-2.5.0/src/RNAlocmin/move_set_pk.h ViennaRNA-2.5.0/src/RNAlocmin/configure.ac ViennaRNA-2.5.0/src/RNAlocmin/neighbourhood.h ViennaRNA-2.5.0/src/RNAlocmin/missing ViennaRNA-2.5.0/src/RNAlocmin/move_set_inside.h ViennaRNA-2.5.0/src/RNAlocmin/RNAlocmin_cmdline.h ViennaRNA-2.5.0/src/RNAlocmin/findpath_pk.h ViennaRNA-2.5.0/src/RNAlocmin/install-sh ViennaRNA-2.5.0/src/RNAlocmin/depcomp ViennaRNA-2.5.0/src/RNAlocmin/flood.cpp ViennaRNA-2.5.0/src/RNAlocmin/RNAlocmin_cmdline.c ViennaRNA-2.5.0/src/RNAlocmin/README ViennaRNA-2.5.0/src/RNAlocmin/barrier_tree.cpp ViennaRNA-2.5.0/src/RNAlocmin/treeplot.h ViennaRNA-2.5.0/src/RNAlocmin/pknots.h ViennaRNA-2.5.0/src/RNAlocmin/RNAlocmin.cpp ViennaRNA-2.5.0/src/RNAlocmin/compile ViennaRNA-2.5.0/src/RNAlocmin/config.h.in ViennaRNA-2.5.0/src/RNAlocmin/globals.cpp ViennaRNA-2.5.0/src/RNAlocmin/ChangeLog ViennaRNA-2.5.0/src/RNAlocmin/move_set_inside.c ViennaRNA-2.5.0/src/RNAlocmin/neighbourhood.cpp ViennaRNA-2.5.0/src/json/ ViennaRNA-2.5.0/src/json/_info ViennaRNA-2.5.0/src/json/test/ ViennaRNA-2.5.0/src/json/test/run-stringify.c ViennaRNA-2.5.0/src/json/test/test-strings-reencoded ViennaRNA-2.5.0/src/json/test/run-validate.c ViennaRNA-2.5.0/src/json/test/run-decode-encode.c ViennaRNA-2.5.0/src/json/test/common.h ViennaRNA-2.5.0/src/json/test/run-construction.c ViennaRNA-2.5.0/src/json/test/test-strings ViennaRNA-2.5.0/src/json/.deps/ ViennaRNA-2.5.0/src/json/.deps/json.Plo ViennaRNA-2.5.0/src/json/json.h ViennaRNA-2.5.0/src/json/json.c ViennaRNA-2.5.0/src/json/LICENSE ViennaRNA-2.5.0/src/cthreadpool/ ViennaRNA-2.5.0/src/cthreadpool/.deps/ ViennaRNA-2.5.0/src/cthreadpool/.deps/thpool.Plo ViennaRNA-2.5.0/src/cthreadpool/docs/ ViennaRNA-2.5.0/src/cthreadpool/docs/FAQ.md ViennaRNA-2.5.0/src/cthreadpool/docs/Design.md ViennaRNA-2.5.0/src/cthreadpool/thpool.h ViennaRNA-2.5.0/src/cthreadpool/tests/ ViennaRNA-2.5.0/src/cthreadpool/tests/ext_bugs/ ViennaRNA-2.5.0/src/cthreadpool/tests/ext_bugs/memleak.c ViennaRNA-2.5.0/src/cthreadpool/tests/threadpool.sh ViennaRNA-2.5.0/src/cthreadpool/tests/heap_stack_garbage.sh ViennaRNA-2.5.0/src/cthreadpool/tests/memleaks.sh ViennaRNA-2.5.0/src/cthreadpool/tests/normal_compile.sh ViennaRNA-2.5.0/src/cthreadpool/tests/optimized_compile.sh ViennaRNA-2.5.0/src/cthreadpool/tests/funcs.sh ViennaRNA-2.5.0/src/cthreadpool/tests/wait.sh ViennaRNA-2.5.0/src/cthreadpool/tests/README.md ViennaRNA-2.5.0/src/cthreadpool/tests/api.sh ViennaRNA-2.5.0/src/cthreadpool/tests/pause_resume.sh ViennaRNA-2.5.0/src/cthreadpool/tests/src/ ViennaRNA-2.5.0/src/cthreadpool/tests/src/conc_increment.c ViennaRNA-2.5.0/src/cthreadpool/tests/src/api.c ViennaRNA-2.5.0/src/cthreadpool/tests/src/pause_resume.c ViennaRNA-2.5.0/src/cthreadpool/tests/src/no_work.c ViennaRNA-2.5.0/src/cthreadpool/tests/src/nonzero_heap_stack.c ViennaRNA-2.5.0/src/cthreadpool/tests/src/wait.c ViennaRNA-2.5.0/src/cthreadpool/README.md ViennaRNA-2.5.0/src/cthreadpool/example.c ViennaRNA-2.5.0/src/cthreadpool/thpool.c ViennaRNA-2.5.0/src/cthreadpool/LICENSE ViennaRNA-2.5.0/src/dlib-19.22/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/revision.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/serialize.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/smart_pointers/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/smart_pointers/shared_ptr_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/smart_pointers/weak_ptr.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/smart_pointers/scoped_ptr.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/smart_pointers/shared_ptr_thread_safe.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/smart_pointers/shared_ptr_thread_safe_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/smart_pointers/weak_ptr_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/smart_pointers/shared_ptr.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/array2d/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/array2d/array2d_generic_image.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/array2d/serialize_pixel_overloads.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/array2d/array2d_kernel.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/array2d/array2d_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cstring ViennaRNA-2.5.0/src/dlib-19.22/dlib/cassert ViennaRNA-2.5.0/src/dlib-19.22/dlib/server.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/simd/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/simd/simd8f.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/simd/simd4f.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/simd/simd_check.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/simd/simd8i.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/simd/simd4i.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/hash_table.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/windows_magic.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/any.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_decoder_model.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sockets.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/data_io.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/set/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/set/set_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/set/set_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/set/set_compare_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/set/set_kernel_c.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/set/set_compare_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/any_function.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/graph_cuts.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/optimization.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/read_write_mutex.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/string.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/optimization_test_functions.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/byte_orderer.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/makefile ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/matrix_qr.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/ekm_and_lisf.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/examples/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/examples/CMakeLists.txt ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/queue.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/kcentroid.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/hog_image.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/conditioning_class.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/hash_table.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/static_map.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/binary_search_tree_kernel_2a.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/sparse_vector.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/thread_pool.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/correlation_tracker.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/fhog.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/tokenizer.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/sammon.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/sockstreambuf.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/conditioning_class_c.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/static_set.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/sliding_buffer.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/max_sum_submatrix.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/least_squares.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/sequence.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/hash_map.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/set.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/empirical_kernel_map.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/type_safe_union.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/sockets.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/serialize.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/matrix3.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/cca.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/config_reader.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/lspi.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/checkerboard.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/pixel.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/main.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/CMakeLists.txt ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/one_vs_all_trainer.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/scan_image.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/vectorstream.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/any.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/gui/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/gui/main.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/gui/CMakeLists.txt ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/random_forest.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/fftr_good_data.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/global_optimization.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/timer.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/iosockstream.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/filtering.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/image.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/cmd_line_parser.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/sockets2.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/graph.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/find_max_factor_graph_nmplp.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/matrix_eig.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/svr_linear_trainer.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/opt_qp_solver.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/one_vs_one_trainer.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/reference_counter.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/ranking.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/threads.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/svm_c_linear_dcd.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/tester.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/pyramid_down.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/oca.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/sequence_labeler.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/data_io.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/fft.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/graph_labeler.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/svm_c_linear.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/metaprogramming.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/dnn.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/hash_set.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/probabilistic.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/binary_search_tree.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/symmetric_matrix_cache.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/sequence_segmenter.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/mpc.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/disjoint_subsets.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/object_detector.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/cublas.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/create_iris_datafile.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/svm_struct.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/active_learning.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/svm.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/face.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/svm_multiclass_linear.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/tools/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/tools/CMakeLists.txt ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/compress_stream.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/directed_graph.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/pipe.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/bigint.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/md5.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/parallel_for.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/trust_region.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/kernel_matrix.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/create_iris_datafile.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/learning_to_track.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/array2d.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/member_function_pointer.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/discriminant_pca.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/linear_manifold_regularizer.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/binary_search_tree_mm1.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/matrix4.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/clustering.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/max_cost_assignment.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/sldf.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/statistics.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/example.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/assignment_learning.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/find_max_factor_graph_viterbi.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/matrix.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/smart_pointers.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/stack.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/rls.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/isotonic_regression.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/matrix_lu.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/disjoint_subsets_sized.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/is_same_object.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/entropy_coder.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/WINDOWS_build_and_run_all_unit_tests.bat ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/hash.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/conditioning_class.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/tester.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/crc32.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/lz77_buffer.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/cmd_line_parser_wchar_t.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/matrix_chol.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/cmd_line_parser.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/rand.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/bsp.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/binary_search_tree_mm2.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/parse.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/array.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/find_optimal_parameters.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/geometry.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/kmeans.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/matrix2.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/binary_search_tree_kernel_1a.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/base64.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/bridge.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/bayes_nets.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/multithreaded_object.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/example_args.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/optimization_test_functions.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/map.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/entropy_encoder_model.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/blas_bindings/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/blas_bindings/blas_bindings_dot.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/blas_bindings/blas_bindings_scal_axpy.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/blas_bindings/CMakeLists.txt ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/blas_bindings/blas_bindings_gemv.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/blas_bindings/blas_bindings_gemm.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/blas_bindings/vector.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/blas_bindings/blas_bindings_ger.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/std_vector_c.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/tuple.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/numerical_integration.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/test/elastic_net.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/sqlite.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/member_function_pointer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/revision.h.in ViennaRNA-2.5.0/src/dlib-19.22/dlib/graph/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/graph/graph_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/graph/graph_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/map/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/map/map_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/map/map_kernel_c.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/map/map_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/simd.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sparse_vector.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sliding_buffer/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/sliding_buffer/sliding_buffer_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sliding_buffer/circular_buffer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sliding_buffer/circular_buffer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sliding_buffer/sliding_buffer_kernel_c.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sliding_buffer/sliding_buffer_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/rand.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/misc_api.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/object_detector.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/shape_predictor_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/full_object_detection_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/object_detector_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/remove_unobtainable_rectangles.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/scan_image.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/correlation_tracker_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/box_overlap_testing_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/scan_image_custom_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/box_overlap_testing.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/scan_image_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/scan_image_boxes_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/frontal_face_detector_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/shape_predictor.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/render_face_detections.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/remove_unobtainable_rectangles_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/setup_hashed_features_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/render_face_detections_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/scan_image_custom.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/scan_image_pyramid.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/scan_image_boxes.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/generic_image.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/detection_template_tools_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/scan_image_pyramid_tools.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/setup_hashed_features.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/frontal_face_detector.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/scan_image_pyramid_tools_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/scan_fhog_pyramid.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/full_object_detection.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/correlation_tracker.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/scan_image_pyramid_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/scan_fhog_pyramid_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/shape_predictor_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/detection_template_tools.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing/shape_predictor_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_saver/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_saver/dng_shared.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_saver/save_png.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_saver/image_saver_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_saver/save_png_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_saver/save_jpeg.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_saver/save_jpeg_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_saver/save_png.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_saver/image_saver.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_saver/save_jpeg.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/travis/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/travis/get-old-cmakes.sh ViennaRNA-2.5.0/src/dlib-19.22/dlib/travis/build-and-test.sh ViennaRNA-2.5.0/src/dlib-19.22/dlib/conditioning_class.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/tokenizer/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/tokenizer/tokenizer_kernel_1.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/tokenizer/tokenizer_kernel_c.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/tokenizer/tokenizer_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/tokenizer/tokenizer_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/static_map/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/static_map/static_map_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/static_map/static_map_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/static_map/static_map_kernel_c.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/bound_function_pointer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/md5/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/md5/md5_kernel_1.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/md5/md5_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/md5/md5_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/timer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake ViennaRNA-2.5.0/src/dlib-19.22/dlib/sockstreambuf/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/sockstreambuf/sockstreambuf.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/sockstreambuf/sockstreambuf_unbuffered.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/sockstreambuf/sockstreambuf_unbuffered.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sockstreambuf/sockstreambuf.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sockstreambuf/sockstreambuf_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/pipe.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/graph_cuts/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/graph_cuts/general_flow_graph.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/graph_cuts/graph_labeler.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/graph_cuts/min_cut_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/graph_cuts/general_potts_problem.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/graph_cuts/find_max_factor_graph_potts_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/graph_cuts/min_cut.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/graph_cuts/find_max_factor_graph_potts.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/graph_cuts/graph_labeler_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/uintn.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/iomanip ViennaRNA-2.5.0/src/dlib-19.22/dlib/unordered_pair.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/random_forest.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/type_safe_union.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/bits/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/bits/c++config.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/crc32/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/crc32/crc32_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/crc32/crc32_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/lz77_buffer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/data_io/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/data_io/libsvm_io_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/data_io/load_image_dataset_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/data_io/image_dataset_metadata.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/data_io/mnist_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/data_io/cifar.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/data_io/libsvm_io.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/data_io/load_image_dataset.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/data_io/cifar_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/data_io/mnist.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/data_io/mnist.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/data_io/image_dataset_metadata.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/data_io/cifar.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/config.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/xml_parser.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/segment_image.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/colormaps.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/interpolation.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/draw.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/assign_image.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/integral_image.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/spatial_filtering_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/colormaps_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/draw_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/random_cropper.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/label_connected_blobs_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/morphological_operations.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/integral_image_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/lbp_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/random_color_transform.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/thresholding.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/random_color_transform_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/equalize_histogram.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/equalize_histogram_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/hough_transform_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/interpolation_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/fhog.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/morphological_operations_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/fhog_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/image_pyramid_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/edge_detector_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/lbp.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/image_pyramid.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/thresholding_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/hough_transform.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/edge_detector.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/label_connected_blobs.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/spatial_filtering.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/segment_image_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/assign_image_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms/random_cropper_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/disjoint_subsets.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/string.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/ostream ViennaRNA-2.5.0/src/dlib-19.22/dlib/quantum_computing.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/reference_counter/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/reference_counter/reference_counter_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/reference_counter/reference_counter_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/bsp/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/bsp/bsp.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/bsp/bsp_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/bsp/bsp.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/python.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/static_set/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/static_set/static_set_compare_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/static_set/static_set_compare_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/static_set/static_set_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/static_set/static_set_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/static_set/static_set_kernel_c.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/memory_manager_global/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/memory_manager_global/memory_manager_global_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/memory_manager_global/memory_manager_global_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/hash_set.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sliding_buffer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/python/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/python/pyassert.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/python/numpy_image.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/python/serialize_pickle.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/python/pybind_utils.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/array.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/vectorstream.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/stack_trace.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_decoder.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/memory_manager_stateless/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/memory_manager_stateless/memory_manager_stateless_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/memory_manager_stateless/memory_manager_stateless_kernel_2.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/memory_manager_stateless/memory_manager_stateless_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/array2d.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/CMakeLists.txt ViennaRNA-2.5.0/src/dlib-19.22/dlib/dnn/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/dnn/utilities.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/dnn/input.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/dnn/trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/dnn/input_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/dnn/misc.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/dnn/validation.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/dnn/layers.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/dnn/layers_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/dnn/solvers_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/dnn/trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/dnn/utilities_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/dnn/loss.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/dnn/solvers.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/dnn/loss_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/dnn/core_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/dnn/core.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/memory_manager_global.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/linker/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/linker/linker_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/linker/linker_kernel_1.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/linker/linker_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cpp_tokenizer/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/cpp_tokenizer/cpp_tokenizer_kernel_c.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cpp_tokenizer/cpp_tokenizer_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cpp_tokenizer/cpp_tokenizer_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/timeout.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/filtering.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/string/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/string/cassert ViennaRNA-2.5.0/src/dlib-19.22/dlib/string/iomanip ViennaRNA-2.5.0/src/dlib-19.22/dlib/string/string.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/string/locale ViennaRNA-2.5.0/src/dlib-19.22/dlib/string/string_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/string/iosfwd ViennaRNA-2.5.0/src/dlib-19.22/dlib/string/iostream ViennaRNA-2.5.0/src/dlib-19.22/dlib/misc_api/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/misc_api/posix.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/misc_api/misc_api_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/misc_api/misc_api_shared.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/misc_api/misc_api_kernel_2.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/misc_api/misc_api_kernel_2.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/misc_api/misc_api_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/misc_api/windows.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/misc_api/misc_api_kernel_1.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/graph_utils.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_keypoint.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/CONTRIBUTING.md ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/CMakeLists.txt ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/tools/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/tools/FindEigen3.cmake ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/tools/pybind11Config.cmake.in ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/tools/libsize.py ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/tools/mkdoc.py ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/tools/FindPythonLibsNew.cmake ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/tools/FindCatch.cmake ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/tools/check-style.sh ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/tools/pybind11Tools.cmake ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/include/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/include/pybind11/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/include/pybind11/detail/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/include/pybind11/detail/typeid.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/include/pybind11/detail/internals.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/include/pybind11/detail/descr.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/include/pybind11/detail/common.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/include/pybind11/detail/init.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/include/pybind11/detail/class.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/include/pybind11/iostream.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/include/pybind11/eigen.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/include/pybind11/complex.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/include/pybind11/attr.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/include/pybind11/stl.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/include/pybind11/options.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/include/pybind11/operators.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/include/pybind11/functional.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/include/pybind11/stl_bind.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/include/pybind11/cast.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/include/pybind11/pytypes.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/include/pybind11/numpy.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/include/pybind11/common.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/include/pybind11/chrono.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/include/pybind11/eval.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/include/pybind11/embed.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/include/pybind11/buffer_info.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/include/pybind11/pybind11.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/README.md ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/pybind11/LICENSE ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/zlib/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/zlib/trees.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/zlib/crc32.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/zlib/trees.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/zlib/gzclose.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/zlib/zutil.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/zlib/zlib.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/zlib/compress.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/zlib/gzguts.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/zlib/crc32.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/zlib/inftrees.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/zlib/zconf.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/zlib/inflate.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/zlib/README ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/zlib/inffixed.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/zlib/gzread.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/zlib/gzwrite.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/zlib/inffast.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/zlib/inftrees.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/zlib/deflate.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/zlib/deflate.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/zlib/infback.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/zlib/inffast.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/zlib/adler32.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/zlib/uncompr.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/zlib/inflate.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/zlib/zutil.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/zlib/gzlib.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libpng/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libpng/pngstruct.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libpng/pngpread.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libpng/pnglibconf.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libpng/pngrio.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libpng/pngerror.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libpng/pngget.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libpng/pngread.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libpng/pngwutil.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libpng/pngset.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libpng/png.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libpng/pngrutil.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libpng/pngconf.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libpng/pngwio.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libpng/pngdebug.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libpng/pngtrans.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libpng/arm/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libpng/arm/filter_neon.S ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libpng/arm/arm_init.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libpng/arm/filter_neon_intrinsics.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libpng/png.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libpng/pngwrite.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libpng/pngrtran.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libpng/README ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libpng/pngmem.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libpng/pngwtran.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libpng/pnginfo.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libpng/pngpriv.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libpng/LICENSE ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dspmv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_chbmv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_srotm.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_ssyr.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dtrsv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/dzasumsub.f ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/dznrm2sub.f ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_icamax.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_srot.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_cgemm.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_zhemm.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_stbsv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_zcopy.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/dasumsub.f ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_csyr2k.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dasum.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_sswap.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dtpsv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_saxpy.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_ztrmm.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_cgemv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_isamax.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dger.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_ztpmv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_scasum.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/isamaxsub.f ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dzasum.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_zgerc.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_zhbmv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/snrm2sub.f ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dspr2.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_zherk.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_ctbmv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_ssyr2k.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_ssyr2.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_cdotu_sub.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/sdotsub.f ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/zdotcsub.f ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_ctrmm.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_cher2k.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_ctbsv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_srotmg.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_chpr2.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/CMakeLists.txt ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_ztbsv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_chpr.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_ddot.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_cgeru.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/sasumsub.f ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_cher2.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/scnrm2sub.f ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_zswap.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_sspmv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_ztbmv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dznrm2.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_stpmv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_xerbla.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_cher.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dscal.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_csymm.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_sgemm.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_daxpy.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dspr.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_sgbmv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_zhemv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dsymm.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_scnrm2.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_strmv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_zher2k.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_drot.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_sasum.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dtbmv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/zdotusub.f ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dgemv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_caxpy.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cdotcsub.f ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_stpsv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_csscal.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dsyrk.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_f77.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_chpmv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_strsm.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_zscal.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_ccopy.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_zgemv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_ssymm.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_ztrsv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_ssbmv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_ztpsv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cdotusub.f ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_cgbmv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_sger.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dnrm2.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_zgbmv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_chemm.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_izamax.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_srotg.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_ctrsm.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/sdsdotsub.f ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dswap.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_strsv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_sdot.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dtrmm.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dgemm.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_zsymm.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_sscal.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_cgerc.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/icamaxsub.f ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dcopy.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_sspr2.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_idamax.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/ddotsub.f ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_cherk.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_cscal.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dsbmv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dtpmv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_ssymv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_drotg.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_zaxpy.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/README ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dtbsv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_zher.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_zhpr2.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dtrmv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_sgemv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_zhpr.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dsymv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_chemv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dsyr.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_zgeru.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_sdsdot.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dsdot.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_zsyr2k.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_drotmg.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_strmm.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_zdotu_sub.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/idamaxsub.f ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_zdscal.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dgbmv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dtrsm.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_cdotc_sub.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_zsyrk.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_scopy.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_zdotc_sub.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_ztrmv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_csyrk.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/scasumsub.f ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dsyr2k.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_ctrsv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_ctpmv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_stbmv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_drotm.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_ssyrk.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_sspr.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_ztrsm.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/dsdotsub.f ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_dsyr2.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_zher2.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_ctpsv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_cswap.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_snrm2.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_zgemm.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/dnrm2sub.f ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_zhpmv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/cblas_ctrmv.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/cblas/izamaxsub.f ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jfdctint.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jdtrans.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/rdcolmap.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jquant1.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jchuff.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jdcoefct.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jpegint.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jdatasrc.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jmorecfg.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/rdgif.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/transupp.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jerror.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jddctmgr.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jccoefct.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jdsample.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jcsample.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jmemansi.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/wrjpgcom.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/rdbmp.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jdmarker.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jcarith.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jutils.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jdmaster.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jmemmgr.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/wrppm.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jidctfst.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/wrgif.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jmemnobs.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/rdtarga.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jdpostct.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jcparam.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jcomapi.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jdhuff.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jdmerge.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jctrans.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jcdctmgr.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jcmaster.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jcprepct.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jdarith.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jmemsys.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jidctint.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jcinit.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jdct.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jdmainct.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/wrtarga.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/cderror.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/makefile.dj ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/transupp.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/wrrle.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/rdppm.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/cdjpeg.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jerror.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jpeglib.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jinclude.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jcapistd.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jfdctfst.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jdatadst.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/README ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jcmainct.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jquant2.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jdcolor.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/rdjpgcom.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jcmarker.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jversion.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jcapimin.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jconfig.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jccolor.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/rdrle.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jpegtran.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jidctflt.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jdinput.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/readme.dos ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/rdswitch.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jaricom.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jfdctflt.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/wrbmp.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jdapistd.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jmemname.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/external/libjpeg/jdapimin.c ViennaRNA-2.5.0/src/dlib-19.22/dlib/random_forest/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/random_forest/random_forest_regression.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/random_forest/random_forest_regression_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/bayes_utils.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matlab/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/matlab/example_mex_struct.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/matlab/example.m ViennaRNA-2.5.0/src/dlib-19.22/dlib/matlab/CMakeLists.txt ViennaRNA-2.5.0/src/dlib-19.22/dlib/matlab/cmake_mex_wrapper ViennaRNA-2.5.0/src/dlib-19.22/dlib/matlab/call_matlab.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matlab/mex_wrapper.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/matlab/README.txt ViennaRNA-2.5.0/src/dlib-19.22/dlib/matlab/subprocess_stream.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matlab/example_mex_class.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/matlab/example_mex_callback.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/matlab/subprocess_stream.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/matlab/example_mex_function.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/locale ViennaRNA-2.5.0/src/dlib-19.22/dlib/graph.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/bigint/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/bigint/bigint_kernel_c.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/bigint/bigint_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/bigint/bigint_kernel_1.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/bigint/bigint_kernel_2.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/bigint/bigint_kernel_2.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/bigint/bigint_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/memory_manager/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/memory_manager/memory_manager_kernel_3.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/memory_manager/memory_manager_kernel_2.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/memory_manager/memory_manager_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/memory_manager/memory_manager_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/LICENSE.txt ViennaRNA-2.5.0/src/dlib-19.22/dlib/sqlite/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/sqlite/sqlite.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sqlite/sqlite_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sqlite/sqlite_tools_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sqlite/sqlite_tools.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/bsp.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/threaded_object_extension_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/rmutex_extension.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/threads_kernel_2.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/threaded_object_extension.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/threads_kernel_1.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/parallel_for_extension.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/posix.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/create_new_thread_extension.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/threads_kernel_shared.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/thread_specific_data_extension.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/async.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/parallel_for_extension_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/rsignaler_extension_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/threaded_object_extension.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/threads_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/threads_kernel.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/rsignaler_extension.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/thread_pool_extension_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/auto_unlock_extension_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/auto_mutex_extension_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/thread_pool_extension.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/thread_specific_data_extension_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/thread_function_extension.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/multithreaded_object_extension.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/multithreaded_object_extension.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/async.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/rmutex_extension_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/thread_function_extension_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/threads_kernel_2.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/auto_mutex_extension.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/auto_unlock_extension.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/multithreaded_object_extension_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/async_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/create_new_thread_extension_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/read_write_mutex_extension_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/windows.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/read_write_mutex_extension.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/thread_pool_extension.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/threads_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/threads/threads_kernel_shared.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/timing.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_core.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/bridge.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_core/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_core/gui_core_kernel_2.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_core/gui_core_kernel_2.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_core/gui_core_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_core/windows.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_core/gui_core_kernel_1.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_core/gui_core_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_core/xlib.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cpp_pretty_printer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_keypoint/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_keypoint/draw_surf_points.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_keypoint/build_separable_poly_filters.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_keypoint/poly_image_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_keypoint/fine_hog_image.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_keypoint/hog.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_keypoint/hashed_feature_image.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_keypoint/surf.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_keypoint/hashed_feature_image_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_keypoint/fine_hog_image_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_keypoint/surf_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_keypoint/hessian_pyramid_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_keypoint/hog_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_keypoint/draw_surf_points_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_keypoint/poly_image.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_keypoint/binned_vector_feature_image.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_keypoint/nearest_neighbor_feature_image.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_keypoint/nearest_neighbor_feature_image_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_keypoint/hessian_pyramid.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_keypoint/binned_vector_feature_image_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/assert.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sockstreambuf.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/ranking_tools.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/one_vs_all_decision_function_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/kcentroid_overloads.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/cross_validate_assignment_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/svm_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/reduced_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/kkmeans_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/active_learning.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/assignment_function.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/svm_nu_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/structural_graph_labeling_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/assignment_function_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/sparse_vector.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/svm_rank_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/num_nonnegative_weights.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/structural_sequence_labeling_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/rls_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/svm_nu_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/structural_svm_distributed.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/auto.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/structural_svm_distributed_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/structural_assignment_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/null_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/structural_svm_problem_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/svm_one_class_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/rbf_network_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/svm_c_linear_dcd_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/cross_validate_graph_labeling_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/auto.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/null_df.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/rvm.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/sequence_segmenter.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/track_association_function.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/cross_validate_sequence_segmenter.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/rls.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/one_vs_one_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/linearly_independent_subset_finder_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/structural_svm_problem_threaded_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/svm_rank_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/simplify_linear_decision_function_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/empirical_kernel_map.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/rvm_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/sequence_labeler_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/structural_object_detection_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/structural_graph_labeling_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/svm_c_linear_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/one_vs_all_decision_function.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/rbf_network.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/structural_track_association_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/multiclass_tools.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/ranking_tools_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/kcentroid_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/one_vs_one_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/function.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/sequence_labeler.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/linearly_independent_subset_finder.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/rr_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/svr_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/structural_svm_problem_threaded.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/one_vs_one_decision_function.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/structural_svm_graph_labeling_problem_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/cross_validate_regression_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/svm_c_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/svm_c_linear_dcd_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/structural_sequence_labeling_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/roc_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/cross_validate_sequence_labeler_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/reduced.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/svr_linear_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/structural_sequence_segmentation_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/structural_svm_sequence_labeling_problem.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/cross_validate_object_detection_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/krr_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/svr_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/structural_svm_object_detection_problem_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/kkmeans.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/cross_validate_sequence_segmenter_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/structural_assignment_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/cross_validate_track_association_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/one_vs_all_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/svm_c_ekm_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/auto_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/svm_multiclass_linear_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/sequence_segmenter_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/structural_track_association_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/function_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/sort_basis_vectors.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/sparse_kernel.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/structural_svm_assignment_problem.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/kernel_matrix.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/structural_sequence_segmentation_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/svm_multiclass_linear_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/structural_svm_sequence_labeling_problem_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/roc_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/sparse_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/rr_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/cross_validate_sequence_labeler.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/svm_c_linear_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/sort_basis_vectors_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/feature_ranking.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/structural_svm_assignment_problem_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/kernel.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/track_association_function_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/kcentroid.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/structural_svm_object_detection_problem.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/kernel_matrix_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/svr_linear_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/svm_one_class_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/svm_c_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/cross_validate_multiclass_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/one_vs_all_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/feature_ranking_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/svm.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/structural_svm_graph_labeling_problem.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/pegasos.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/krls.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/active_learning_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/cross_validate_object_detection_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/cross_validate_multiclass_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/one_vs_one_decision_function_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/empirical_kernel_map_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/cross_validate_track_association_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/null_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/svm_c_ekm_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/cross_validate_assignment_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/structural_object_detection_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/svm_threaded_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/multiclass_tools_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/krls_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/pegasos_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/svm_threaded.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/krr_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/cross_validate_graph_labeling_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/structural_svm_problem.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/sparse_vector_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/simplify_linear_decision_function.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm/cross_validate_regression_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_loader/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_loader/jpeg_loader.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_loader/png_loader.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_loader/png_loader.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_loader/png_loader_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_loader/jpeg_loader_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_loader/image_loader_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_loader/load_image.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_loader/jpeg_loader.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_loader/load_image_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_loader/image_loader.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/byte_orderer/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/byte_orderer/byte_orderer_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/byte_orderer/byte_orderer_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/member_function_pointer/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/member_function_pointer/make_mfp.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/member_function_pointer/make_mfp_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/member_function_pointer/member_function_pointer_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/member_function_pointer/member_function_pointer_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/stack/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/stack/stack_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/stack/stack_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/stack/stack_kernel_c.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/logger.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/set_utils/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/set_utils/set_utils_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/set_utils/set_utils.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/reference_counter.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/lzp_buffer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/geometry/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/geometry/vector_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/geometry/drectangle_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/geometry/drectangle.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/geometry/line.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/geometry/point_transforms.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/geometry/border_enumerator.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/geometry/rectangle_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/geometry/line_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/geometry/border_enumerator_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/geometry/point_transforms_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/geometry/rectangle.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/geometry/vector.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/console_progress_indicator.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/rand/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/rand/mersenne_twister.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/rand/rand_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/rand/rand_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/queue.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/conditioning_class/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/conditioning_class/conditioning_class_kernel_2.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/conditioning_class/conditioning_class_kernel_c.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/conditioning_class/conditioning_class_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/conditioning_class/conditioning_class_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/conditioning_class/conditioning_class_kernel_3.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/conditioning_class/conditioning_class_kernel_4.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_io.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/manifold_regularization/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/manifold_regularization/linear_manifold_regularizer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/manifold_regularization/linear_manifold_regularizer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/stl_checked/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/stl_checked/std_vector_c_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/stl_checked/std_vector_c.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/time_this.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/numerical_integration.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/test_for_odr_violations.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/ref.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/lsh/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/lsh/create_random_projection_hash_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/lsh/projection_hash_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/lsh/hashes_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/lsh/projection_hash.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/lsh/create_random_projection_hash.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/lsh/hashes.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/mlp.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/crc32.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/graph_cuts.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/binary_search_tree.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/metaprogramming.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/bayes_utils/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/bayes_utils/bayes_utils_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/bayes_utils/bayes_utils.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_processing.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/hash_map/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/hash_map/hash_map_kernel_c.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/hash_map/hash_map_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/hash_map/hash_map_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/opencv/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/opencv/cv_image.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/opencv/to_open_cv.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/opencv/cv_image_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/opencv/to_open_cv_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/timeout/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/timeout/timeout_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/timeout/timeout.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmd_line_parser/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmd_line_parser/cmd_line_parser_check_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmd_line_parser/cmd_line_parser_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmd_line_parser/get_option_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmd_line_parser/get_option.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmd_line_parser/cmd_line_parser_print_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmd_line_parser/cmd_line_parser_check_c.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmd_line_parser/cmd_line_parser_kernel_c.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmd_line_parser/cmd_line_parser_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/bigint.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cuda/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/cuda/cuda_data_ptr.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/cuda/tensor.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cuda/cudnn_dlibapi.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cuda/tensor_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cuda/cusolver_dlibapi.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cuda/cuda_errors.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cuda/cuda_dlib.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cuda/gpu_data_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cuda/gpu_data.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cuda/cusolver_dlibapi.cu ViennaRNA-2.5.0/src/dlib-19.22/dlib/cuda/cublas_dlibapi.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/cuda/gpu_data.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/cuda/curand_dlibapi.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cuda/cuda_utils.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cuda/cublas_dlibapi.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cuda/tensor_tools.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/cuda/tensor_tools.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cuda/curand_dlibapi.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/cuda/cudnn_dlibapi.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/cuda/cpu_dlib.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/cuda/cuda_dlib.cu ViennaRNA-2.5.0/src/dlib-19.22/dlib/cuda/cpu_dlib.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cuda/cuda_data_ptr.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/graph_utils_threaded.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/server/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/server/server_kernel.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/server/server_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/server/server_http.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/server/server_http.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/server/server_iostream.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/server/server_iostream_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/server/server_kernel.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/server/server_iostream.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/server/server_http_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/control.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/queue/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/queue/queue_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/queue/queue_sort_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/queue/queue_kernel_2.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/queue/queue_kernel_c.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/queue/queue_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/queue/queue_sort_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/logger/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/logger/extra_logger_headers.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/logger/logger_config_file.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/logger/extra_logger_headers.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/logger/logger_config_file.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/logger/logger_kernel_1.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/logger/logger_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/logger/logger_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/static_map.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/dlib_basic_cpp_build_tutorial.txt ViennaRNA-2.5.0/src/dlib-19.22/dlib/lzp_buffer/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/lzp_buffer/lzp_buffer_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/lzp_buffer/lzp_buffer_kernel_c.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/lzp_buffer/lzp_buffer_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/lzp_buffer/lzp_buffer_kernel_2.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/opencv.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/statistics/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/statistics/statistics_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/statistics/average_precision_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/statistics/vector_normalizer_frobmetric.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/statistics/running_gradient.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/statistics/sammon_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/statistics/dpca_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/statistics/dpca.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/statistics/image_feature_sampling.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/statistics/sammon.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/statistics/lda.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/statistics/running_gradient_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/statistics/image_feature_sampling_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/statistics/lda_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/statistics/random_subset_selector.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/statistics/statistics.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/statistics/cca.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/statistics/vector_normalizer_frobmetric_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/statistics/average_precision.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/statistics/cca_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/statistics/random_subset_selector_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/base64/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/base64/base64_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/base64/base64_kernel_1.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/base64/base64_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/smart_pointers.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/hash_set/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/hash_set/hash_set_kernel_c.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/hash_set/hash_set_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/hash_set/hash_set_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/graph_utils/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/graph_utils/find_k_nearest_neighbors_lsh_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/graph_utils/ordered_sample_pair.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/graph_utils/edge_list_graphs.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/graph_utils/edge_list_graphs_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/graph_utils/sample_pair.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/graph_utils/graph_utils.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/graph_utils/find_k_nearest_neighbors_lsh.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/graph_utils/ordered_sample_pair_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/graph_utils/function_objects.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/graph_utils/function_objects_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/graph_utils/sample_pair_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/graph_utils/graph_utils_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/bit_stream/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/bit_stream/bit_stream_multi_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/bit_stream/bit_stream_multi_c.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/bit_stream/bit_stream_multi_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/bit_stream/bit_stream_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/bit_stream/bit_stream_kernel_c.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/bit_stream/bit_stream_kernel_1.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/bit_stream/bit_stream_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/unicode.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cpp_tokenizer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/unicode/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/unicode/unicode_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/unicode/unicode.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/unicode/unicode.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/image_transforms.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/pipe/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/pipe/pipe_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/pipe/pipe_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/vectorstream/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/vectorstream/vectorstream_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/vectorstream/vectorstream.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/vectorstream/unserialize_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/vectorstream/unserialize.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/iosockstream.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_widgets.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/http_client/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/http_client/http_client.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/http_client/http_client.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/http_client/http_client_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/quantum_computing/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/quantum_computing/quantum_computing.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/quantum_computing/quantum_computing_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/stl_checked.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/hash_map.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/any/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/any/any.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/any/any_function_impl.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/any/any_function_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/any/any_trainer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/any/any_trainer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/any/any_function_impl2.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/any/any_decision_function.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/any/any_decision_function_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/any/any_function.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/any/any_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sstream ViennaRNA-2.5.0/src/dlib-19.22/dlib/timer/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/timer/timer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/timer/timer.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/timer/timer_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/timer/timer_heavy.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/map.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/directed_graph.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/lz77_buffer/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/lz77_buffer/lz77_buffer_kernel_2.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/lz77_buffer/lz77_buffer_kernel_c.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/lz77_buffer/lz77_buffer_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/lz77_buffer/lz77_buffer_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/dnn.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cpp_pretty_printer/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/cpp_pretty_printer/cpp_pretty_printer_kernel_2.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cpp_pretty_printer/cpp_pretty_printer_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cpp_pretty_printer/cpp_pretty_printer_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/stack_trace.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/manifold_regularization.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sequence.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/static_set.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_encoder_model.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/filtering/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/filtering/rls_filter_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/filtering/rls_filter.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/filtering/kalman_filter.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/filtering/kalman_filter_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/filtering/kalman_filter.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/xml_parser/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/xml_parser/xml_parser_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/xml_parser/xml_parser_kernel_interfaces.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/xml_parser/xml_parser_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/iosockstream/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/iosockstream/iosockstream.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/iosockstream/iosockstream_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/tuple/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/tuple/tuple_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/tuple/tuple.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/optimization_line_search_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/optimization_trust_region_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/optimization_bobyqa.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/optimization_solve_qp_using_smo_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/find_optimal_parameters_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/max_cost_assignment.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/optimization_solve_qp3_using_smo_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/optimization_search_strategies_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/optimization_stop_strategies.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/max_cost_assignment_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/optimization_solve_qp3_using_smo.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/optimization_least_squares_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/find_max_parse_cky.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/elastic_net_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/optimization.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/max_sum_submatrix_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/optimization_line_search.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/isotonic_regression.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/max_sum_submatrix.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/optimization_trust_region.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/optimization_stop_strategies_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/optimization_search_strategies.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/elastic_net.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/isotonic_regression_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/optimization_oca.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/optimization_least_squares.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/find_max_factor_graph_nmplp.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/optimization_solve_qp2_using_smo.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/find_max_factor_graph_viterbi_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/optimization_solve_qp_using_smo.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/find_max_factor_graph_nmplp_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/find_max_factor_graph_viterbi.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/optimization_oca_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/optimization_solve_qp2_using_smo_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/optimization_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/find_optimal_parameters.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/optimization_bobyqa_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/optimization/find_max_parse_cky_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/test_for_odr_violations.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_encoder/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_encoder/entropy_encoder_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_encoder/entropy_encoder_kernel_c.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_encoder/entropy_encoder_kernel_2.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_encoder/entropy_encoder_kernel_2.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_encoder/entropy_encoder_kernel_1.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_encoder/entropy_encoder_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/numerical_integration/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/numerical_integration/integrate_function_adapt_simpson.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/numerical_integration/integrate_function_adapt_simpson_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/dir_nav.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_decoder/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_decoder/entropy_decoder_kernel_1.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_decoder/entropy_decoder_kernel_2.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_decoder/entropy_decoder_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_decoder/entropy_decoder_kernel_2.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_decoder/entropy_decoder_kernel_c.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_decoder/entropy_decoder_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/algs.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/istream ViennaRNA-2.5.0/src/dlib-19.22/dlib/config_reader/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/config_reader/config_reader_thread_safe_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/config_reader/config_reader_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/config_reader/config_reader_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/config_reader/config_reader_thread_safe_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_decoder_model/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_decoder_model/entropy_decoder_model_kernel_5.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_decoder_model/entropy_decoder_model_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_decoder_model/entropy_decoder_model_kernel_4.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_decoder_model/entropy_decoder_model_kernel_3.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_decoder_model/entropy_decoder_model_kernel_6.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_decoder_model/entropy_decoder_model_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_decoder_model/entropy_decoder_model_kernel_2.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/is_kind.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/dlib_include_path_tutorial.txt ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/noncopyable.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sort.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/geometry.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/byte_orderer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/all/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/all/.deps/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/all/.deps/libRNA_concentrations_la-source.Plo ViennaRNA-2.5.0/src/dlib-19.22/dlib/all/source.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/binary_search_tree/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/binary_search_tree/binary_search_tree_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/binary_search_tree/binary_search_tree_kernel_2.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/binary_search_tree/binary_search_tree_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/binary_search_tree/binary_search_tree_kernel_c.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/tokenizer.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/mlp/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/mlp/mlp_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/mlp/mlp_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/mlp/mlp_kernel_c.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/check_if_sse4_instructions_executable_on_host.cmake ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/set_compiler_specific_options.cmake ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/test_for_libpng/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/test_for_libpng/CMakeLists.txt ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/test_for_libpng/libpng_test.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/find_libpng.cmake ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/test_for_cpp11/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/test_for_cpp11/CMakeLists.txt ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/test_for_cpp11/cpp11_test.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/find_libjpeg.cmake ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/tell_visual_studio_to_use_static_runtime.cmake ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/check_if_avx_instructions_executable_on_host.cmake ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/check_if_neon_available.cmake ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/add_global_compiler_switch.cmake ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/test_for_neon/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/test_for_neon/CMakeLists.txt ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/test_for_neon/neon_test.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/release_build_by_default ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/test_for_cuda/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/test_for_cuda/cuda_test.cu ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/test_for_cuda/CMakeLists.txt ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/test_for_cudnn/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/test_for_cudnn/CMakeLists.txt ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/test_for_cudnn/find_cudnn.txt ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/use_cpp_11.cmake ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/dlibConfig.cmake.in ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/dlib.pc.in ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/find_blas.cmake ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/test_for_sse4/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/test_for_sse4/CMakeLists.txt ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/test_for_sse4/sse4_test.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/test_for_sse4/this_file_doesnt_compile.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/test_for_libjpeg/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/test_for_libjpeg/CMakeLists.txt ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/test_for_libjpeg/libjpeg_test.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/test_for_avx/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/test_for_avx/CMakeLists.txt ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/test_for_avx/avx_test.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmake_utils/test_for_avx/this_file_doesnt_compile.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/global_optimization.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/compress_stream/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/compress_stream/compress_stream_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/compress_stream/compress_stream_kernel_3.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/compress_stream/compress_stream_kernel_2.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/compress_stream/compress_stream_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sync_extension.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/iosfwd ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/set_utils.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/global_optimization/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/global_optimization/find_max_global_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/global_optimization/find_max_global.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/global_optimization/global_function_search_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/global_optimization/upper_bound_function_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/global_optimization/global_function_search.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/global_optimization/upper_bound_function.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/global_optimization/global_function_search.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sequence/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/sequence/sequence_sort_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sequence/sequence_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sequence/sequence_kernel_2.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sequence/sequence_kernel_c.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sequence/sequence_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sequence/sequence_sort_2.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sequence/sequence_sort_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sequence/sequence_compare_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sequence/sequence_compare_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/error.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/lsh.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/java/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/java/swig_test.java ViennaRNA-2.5.0/src/dlib-19.22/dlib/java/CMakeLists.txt ViennaRNA-2.5.0/src/dlib-19.22/dlib/java/swig_api.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/java/cmake_swig_jni ViennaRNA-2.5.0/src/dlib-19.22/dlib/java/run_test.sh ViennaRNA-2.5.0/src/dlib-19.22/dlib/java/java_array.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/pixel.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/cmd_line_parser.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/type_safe_union/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/type_safe_union/type_safe_union_kernel.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/type_safe_union/type_safe_union_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/statistics.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/fstream ViennaRNA-2.5.0/src/dlib-19.22/dlib/smart_pointers_thread_safe.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/general_hash/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/general_hash/general_hash.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/general_hash/count_bits_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/general_hash/count_bits.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/general_hash/murmur_hash3.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/general_hash/murmur_hash3_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/general_hash/random_hashing_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/general_hash/random_hashing.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/general_hash/hash.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/general_hash/hash_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/std_allocator.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/memory_manager.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/numeric_constants.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/hash.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sockets/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/sockets/sockets_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sockets/posix.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sockets/sockets_kernel_2.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/sockets/sockets_extensions.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sockets/sockets_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sockets/sockets_kernel_1.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/sockets/sockets_extensions.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/sockets/sockets_extensions_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sockets/sockets_kernel_2.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sockets/windows.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/stack.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/base64.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/bit_stream.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/config_reader.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/clustering.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/clustering/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/clustering/chinese_whispers.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/clustering/spectral_cluster_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/clustering/chinese_whispers_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/clustering/bottom_up_cluster_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/clustering/modularity_clustering.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/clustering/modularity_clustering_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/clustering/spectral_cluster.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/clustering/bottom_up_cluster.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/memory_manager_stateless.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_encoder.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/array/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/array/array_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/array/array_tools.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/array/array_kernel.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/array/array_tools_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_widgets/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_widgets/drawable.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_widgets/widgets.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_widgets/base_widgets.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_widgets/drawable.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_widgets/widgets.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_widgets/style.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_widgets/canvas_drawing.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_widgets/widgets_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_widgets/nativefont.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_widgets/style.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_widgets/fonts.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_widgets/base_widgets.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_widgets/canvas_drawing_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_widgets/base_widgets_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_widgets/fonts.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_widgets/fonts_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_widgets/style_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_widgets/drawable_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/gui_widgets/canvas_drawing.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_utilities.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_fft.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_conj_trans.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/fft_size.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_data_layout_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/mkl_fft.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_assign.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/lapack/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/lapack/syev.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/lapack/pbtrf.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/lapack/getrf.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/lapack/geev.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/lapack/fortran_id.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/lapack/gees.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/lapack/geqrf.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/lapack/potrf.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/lapack/ormqr.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/lapack/syevr.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/lapack/gesdd.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/lapack/gesvd.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_math_functions.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_blas_bindings.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_expressions.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_data_layout.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_conv.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/kiss_fft.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_fft_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_subexp.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_read_from_istream.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_op.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_lu.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_eigenvalue.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_fwd.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/cblas_constants.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_la_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_generic_image.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_assign_fwd.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/symmetric_matrix_cache.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_subexp_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_utilities_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/symmetric_matrix_cache_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_mat_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_cholesky.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_qr.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_conv_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_la.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_trsm.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_exp_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_mat.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_exp.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_math_functions_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/matrix/matrix_default_mul.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sync_extension/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/sync_extension/sync_extension_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/sync_extension/sync_extension_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/config.h.in ViennaRNA-2.5.0/src/dlib-19.22/dlib/disjoint_subsets/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/disjoint_subsets/disjoint_subsets.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/disjoint_subsets/disjoint_subsets_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/disjoint_subsets/disjoint_subsets_sized_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/disjoint_subsets/disjoint_subsets_sized.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_encoder_model/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_encoder_model/entropy_encoder_model_kernel_6.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_encoder_model/entropy_encoder_model_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_encoder_model/entropy_encoder_model_kernel_4.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_encoder_model/entropy_encoder_model_kernel_c.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_encoder_model/entropy_encoder_model_kernel_5.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_encoder_model/entropy_encoder_model_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_encoder_model/entropy_encoder_model_kernel_3.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/entropy_encoder_model/entropy_encoder_model_kernel_2.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/iostream ViennaRNA-2.5.0/src/dlib-19.22/dlib/platform.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/tuple.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/svm_threaded.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/linker.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/interfaces/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/interfaces/cmd_line_parser_option.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/interfaces/remover.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/interfaces/enumerable.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/interfaces/map_pair.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/control/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/control/mpc.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/control/lspi.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/control/approximate_linear_models_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/control/approximate_linear_models.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/control/mpc_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/control/lspi_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/float_details.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/hash_table/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/hash_table/hash_table_kernel_c.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/hash_table/hash_table_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/hash_table/hash_table_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/hash_table/hash_table_kernel_2.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/enable_if.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/md5.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/directed_graph/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/directed_graph/directed_graph_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/directed_graph/directed_graph_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/dir_nav/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/dir_nav/posix.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/dir_nav/dir_nav_extensions.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/dir_nav/dir_nav_kernel_1.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/dir_nav/dir_nav_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/dir_nav/dir_nav_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/dir_nav/dir_nav_kernel_2.cpp ViennaRNA-2.5.0/src/dlib-19.22/dlib/dir_nav/dir_nav_kernel_2.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/dir_nav/windows.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/dir_nav/dir_nav_extensions_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/dir_nav/dir_nav_extensions.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/set.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/appveyor/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/appveyor/examples.yml ViennaRNA-2.5.0/src/dlib-19.22/dlib/appveyor/dtest.yml ViennaRNA-2.5.0/src/dlib-19.22/dlib/appveyor/dtest_vc2017.yml ViennaRNA-2.5.0/src/dlib-19.22/dlib/appveyor/python.yml ViennaRNA-2.5.0/src/dlib-19.22/dlib/bound_function_pointer/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/bound_function_pointer/bound_function_pointer_kernel_1.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/bound_function_pointer/bound_function_pointer_kernel_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/compress_stream.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/bridge/ ViennaRNA-2.5.0/src/dlib-19.22/dlib/bridge/bridge_abstract.h ViennaRNA-2.5.0/src/dlib-19.22/dlib/bridge/bridge.h ViennaRNA-2.5.0/src/dlib-19.22/examples/ ViennaRNA-2.5.0/src/dlib-19.22/examples/dnn_introduction_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/svm_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/dnn_instance_segmentation_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/svm_c_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/quantum_computing_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/kcentroid_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/sqlite_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/dnn_instance_segmentation_train_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/3d_point_cloud_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/queue_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/webcam_face_pose_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/dir_nav_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/krls_filter_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/random_cropper_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/object_detector_advanced_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/least_squares_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/fhog_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/empirical_kernel_map_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/resnet.h ViennaRNA-2.5.0/src/dlib-19.22/examples/threads_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/ ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Savage/ ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Savage/000264_01099001.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Savage/000293_01099081.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Savage/000299_01099008.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Savage/000290_01099090.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Savage/000274_01099061.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Savage/000290_01099067.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Savage/000291_01099023.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Savage/000291_01099214.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Savage/000277_01099000.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Savage/000289_01099139.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Savage/000296_01099007.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Simm/ ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Simm/000306_00470223.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Simm/000297_00470170.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Simm/000309_00470287.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Simm/000288_00470387.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Simm/000305_00470717.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Simm/000300_00470148.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Simm/000310_00470421.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Simm/000304_00470122.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Simm/000305_00470162.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Simm/000306_00470222.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Simm/000310_00470511.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Schneider/ ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Schneider/000326_00925765.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Schneider/000326_00926128.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Schneider/000325_00925954.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Schneider/000331_00926012.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Schneider/000329_00925963.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Schneider/000302_00925785.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Schneider/000326_00926089.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Schneider/000326_00926139.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Schneider/000307_00925823.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Schneider/000288_00925786.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Schneider/000329_00925859.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Salley/ ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Salley/000197_02159322.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Salley/000197_02159525.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Salley/000190_02159501.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Salley/000198_02159470.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Salley/000189_02159361.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Salley/000183_02159543.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Salley/000186_02159346.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Salley/000194_02159572.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Salley/000192_02159531.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Salley/000200_02159354.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Salley/000179_02159509.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Shimkus/ ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Shimkus/000376_02340068.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Shimkus/000378_02340151.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Shimkus/000394_02340150.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Shimkus/000390_03227666.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Shimkus/000383_03227939.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Shimkus/000373_03228153.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Shimkus/000375_03227651.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Shimkus/000396_03227722.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Shimkus/000385_03227766.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Shimkus/000378_03227610.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/johns/John_Shimkus/000388_03227773.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/logger_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/thread_function_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/optimization_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/pipe_ex_2.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/svm_struct_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/face_landmark_detection_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/dnn_mmod_find_cars2_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/model_selection_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/svm_rank_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/CMakeLists.txt ViennaRNA-2.5.0/src/dlib-19.22/examples/graph_labeling_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/using_custom_kernels_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/sequence_labeler_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/pascal_voc_2012.h ViennaRNA-2.5.0/src/dlib-19.22/examples/one_class_classifiers_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/rvm_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/dnn_mmod_train_find_cars_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/dnn_dcgan_train_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/gui_api_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/krr_classification_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/integrate_function_adapt_simp_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/custom_trainer_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/dnn_metric_learning_on_images_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/mmod_cars_test_image2.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/running_stats_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/parallel_for_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/krls_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/dnn_mmod_dog_hipsterizer.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/compress_stream_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/server_http_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/multiclass_classification_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/mlp_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/faces/ ViennaRNA-2.5.0/src/dlib-19.22/examples/faces/2008_007676.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/faces/Tom_Cruise_avp_2014_4.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/faces/2008_002506.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/faces/2008_002470.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/faces/image_metadata_stylesheet.xsl ViennaRNA-2.5.0/src/dlib-19.22/examples/faces/bald_guys.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/faces/testing_with_face_landmarks.xml ViennaRNA-2.5.0/src/dlib-19.22/examples/faces/training.xml ViennaRNA-2.5.0/src/dlib-19.22/examples/faces/2008_004176.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/faces/2008_001322.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/faces/2008_001009.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/faces/dogs.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/faces/2007_007763.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/faces/2009_004587.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/faces/2008_002079.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/faces/testing.xml ViennaRNA-2.5.0/src/dlib-19.22/examples/faces/training_with_face_landmarks.xml ViennaRNA-2.5.0/src/dlib-19.22/examples/mmod_cars_test_image.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/dnn_inception_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/matrix_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/bayes_net_from_disk_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/bsp_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/object_detector_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/sockstreambuf_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/thread_pool_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/kkmeans_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/svm_pegasos_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/matrix_expressions_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/dnn_introduction2_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/dnn_instance_segmentation_ex.h ViennaRNA-2.5.0/src/dlib-19.22/examples/dnn_mmod_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/dnn_mmod_find_cars_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/ ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000203.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000184.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000200.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000162.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000248.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000153.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000120.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000229.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000115.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000138.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000185.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000249.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000204.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000250.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000154.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000107.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000111.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000152.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/license.txt ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000128.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000240.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000158.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000132.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000174.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000114.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000110.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000148.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000241.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000134.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000123.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000176.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000126.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000234.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000106.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000245.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000211.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000189.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000230.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000207.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000131.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000218.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000173.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000146.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000213.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000225.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000144.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000156.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000221.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000118.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000112.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000164.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000217.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000141.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000180.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000105.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000224.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000215.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000212.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000222.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000231.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000130.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000242.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000145.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000147.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000149.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000233.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000133.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000139.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000202.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000103.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000226.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000172.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000100.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000167.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000177.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000117.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000140.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000175.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000247.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000137.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000129.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000161.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000122.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000168.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000188.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000159.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000186.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000136.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000187.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000150.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000209.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000119.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000239.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000178.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000163.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000104.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000237.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000223.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000190.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000171.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000205.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000246.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000127.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000179.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000143.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000135.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000192.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000124.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000108.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000194.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000199.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000191.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000220.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000116.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000208.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000166.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000193.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000236.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000125.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000170.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000182.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000244.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000196.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000216.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000210.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000243.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000201.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000151.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000228.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000142.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000227.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000155.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000169.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000214.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000101.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000232.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000183.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000109.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000113.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000195.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000165.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000238.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000121.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000157.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000160.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000197.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000102.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000206.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000219.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000181.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000198.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/video_frames/frame_000235.jpg ViennaRNA-2.5.0/src/dlib-19.22/examples/dnn_introduction3_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/logger_custom_output_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/dnn_face_recognition_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/max_cost_assignment_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/sockets_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/config.txt ViennaRNA-2.5.0/src/dlib-19.22/examples/member_function_pointer_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/image_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/dnn_semantic_segmentation_ex.h ViennaRNA-2.5.0/src/dlib-19.22/examples/server_iostream_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/timer_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/linear_manifold_regularizer_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/train_shape_predictor_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/file_to_code_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/bayes_net_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/video_tracking_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/mpc_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/surf_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/logger_ex_2.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/threaded_object_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/krr_regression_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/dnn_mmod_face_detection_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/bayes_net_gui_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/svm_sparse_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/learning_to_track_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/sequence_segmenter_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/xml_parser_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/hough_transform_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/svr_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/LICENSE_FOR_EXAMPLE_PROGRAMS.txt ViennaRNA-2.5.0/src/dlib-19.22/examples/std_allocator_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/face_detection_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/train_object_detector.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/dnn_imagenet_train_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/rvm_regression_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/bridge_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/dnn_metric_learning_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/iosockstream_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/dnn_imagenet_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/rank_features_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/multithreaded_object_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/fhog_object_detector_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/config_reader_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/dnn_semantic_segmentation_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/pipe_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/assignment_learning_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/examples/dnn_semantic_segmentation_train_ex.cpp ViennaRNA-2.5.0/src/dlib-19.22/python_examples/ ViennaRNA-2.5.0/src/dlib-19.22/python_examples/train_shape_predictor.py ViennaRNA-2.5.0/src/dlib-19.22/python_examples/correlation_tracker.py ViennaRNA-2.5.0/src/dlib-19.22/python_examples/face_jitter.py ViennaRNA-2.5.0/src/dlib-19.22/python_examples/svm_struct.py ViennaRNA-2.5.0/src/dlib-19.22/python_examples/sequence_segmenter.py ViennaRNA-2.5.0/src/dlib-19.22/python_examples/face_landmark_detection.py ViennaRNA-2.5.0/src/dlib-19.22/python_examples/train_object_detector.py ViennaRNA-2.5.0/src/dlib-19.22/python_examples/svm_binary_classifier.py ViennaRNA-2.5.0/src/dlib-19.22/python_examples/face_recognition.py ViennaRNA-2.5.0/src/dlib-19.22/python_examples/global_optimization.py ViennaRNA-2.5.0/src/dlib-19.22/python_examples/requirements.txt ViennaRNA-2.5.0/src/dlib-19.22/python_examples/cnn_face_detector.py ViennaRNA-2.5.0/src/dlib-19.22/python_examples/find_candidate_object_locations.py ViennaRNA-2.5.0/src/dlib-19.22/python_examples/face_alignment.py ViennaRNA-2.5.0/src/dlib-19.22/python_examples/svm_rank.py ViennaRNA-2.5.0/src/dlib-19.22/python_examples/LICENSE_FOR_EXAMPLE_PROGRAMS.txt ViennaRNA-2.5.0/src/dlib-19.22/python_examples/max_cost_assignment.py ViennaRNA-2.5.0/src/dlib-19.22/python_examples/face_clustering.py ViennaRNA-2.5.0/src/dlib-19.22/python_examples/face_detector.py ViennaRNA-2.5.0/src/dlib-19.22/python_examples/opencv_webcam_face_detection.py ViennaRNA-2.5.0/src/dlib-19.22/CMakeLists.txt ViennaRNA-2.5.0/src/dlib-19.22/documentation.html ViennaRNA-2.5.0/src/dlib-19.22/LICENSE.txt ViennaRNA-2.5.0/src/dlib-19.22/ISSUE_TEMPLATE.md ViennaRNA-2.5.0/src/dlib-19.22/docs/ ViennaRNA-2.5.0/src/dlib-19.22/docs/correlation_tracker.py.html ViennaRNA-2.5.0/src/dlib-19.22/docs/train_shape_predictor.py.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dnn_instance_segmentation_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/compile.html ViennaRNA-2.5.0/src/dlib-19.22/docs/max_cost_assignment_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/smart_pointers/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/smart_pointers/weak_ptr_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/smart_pointers/shared_ptr_thread_safe.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/smart_pointers/shared_ptr_thread_safe_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/smart_pointers/shared_ptr_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/smart_pointers/weak_ptr.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/smart_pointers/scoped_ptr.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/smart_pointers/shared_ptr.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/is_kind.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/array2d.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/array2d/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/array2d/array2d_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/array2d/serialize_pixel_overloads.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/array2d/array2d_generic_image.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/array2d/array2d_kernel.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/memory_manager_global.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_decoder.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/binary_search_tree.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/algs.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/simd/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/simd/simd4i.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/simd/simd8i.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/simd/simd4f.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/simd/simd8f.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/simd/simd_check.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/quantum_computing.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/lzp_buffer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/timer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/statistics.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/set/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/set/set_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/set/set_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/set/set_kernel_c.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/set/set_compare_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/set/set_compare_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/example.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/read_write_mutex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/graph.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/binary_search_tree.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/image.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/makefile ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/elastic_net.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/hash_set.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/examples/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/find_max_factor_graph_viterbi.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/serialize.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/any_function.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/svm_struct.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/array.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/filtering.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/config_reader.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/sequence_labeler.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/sparse_vector.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/active_learning.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/empirical_kernel_map.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/mpc.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/queue.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/CMakeLists.txt.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/max_sum_submatrix.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/bsp.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/type_safe_union.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/static_set.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/binary_search_tree_kernel_2a.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/find_max_factor_graph_nmplp.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/byte_orderer.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/map.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/pipe.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/isotonic_regression.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/timer.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/any.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/max_cost_assignment.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/matrix_chol.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/probabilistic.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/compress_stream.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/discriminant_pca.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/hash_table.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/svm.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/binary_search_tree_kernel_1a.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/matrix_eig.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/trust_region.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/std_vector_c.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/matrix4.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/smart_pointers.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/sldf.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/tester.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/sequence_segmenter.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/gui/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/gui/main.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/clustering.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/fhog.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/data_io.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/set.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/pixel.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/assignment_learning.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/cmd_line_parser.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/kcentroid.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/sliding_buffer.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/reference_counter.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/bayes_nets.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/tester.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/scan_image.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/svm_c_linear.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/disjoint_subsets.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/multithreaded_object.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/one_vs_one_trainer.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/numerical_integration.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/entropy_coder.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/hash.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/entropy_encoder_model.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/fft.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/crc32.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/kernel_matrix.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/optimization_test_functions.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/binary_search_tree_mm2.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/sockets.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/static_map.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/binary_search_tree_mm1.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/statistics.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/kmeans.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/thread_pool.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/md5.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/hash_map.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/conditioning_class.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/matrix.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/one_vs_all_trainer.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/directed_graph.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/tools/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/base64.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/face.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/graph_labeler.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/conditioning_class_c.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/graph_cuts.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/dnn.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/global_optimization.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/parallel_for.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/vectorstream.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/parse.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/matrix2.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/stack.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/rand.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/sequence.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/fftr_good_data.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/tuple.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/opt_qp_solver.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/lz77_buffer.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/disjoint_subsets_sized.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/pyramid_down.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/cublas.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/geometry.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/optimization_test_functions.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/create_iris_datafile.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/cmd_line_parser_wchar_t.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/matrix_qr.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/ranking.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/sockstreambuf.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/svm_c_linear_dcd.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/optimization.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/metaprogramming.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/main.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/conditioning_class.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/linear_manifold_regularizer.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/array2d.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/create_iris_datafile.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/matrix_lu.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/sammon.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/cca.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/string.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/object_detector.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/iosockstream.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/learning_to_track.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/ekm_and_lisf.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/threads.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/symmetric_matrix_cache.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/matrix3.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/bigint.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/oca.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/svr_linear_trainer.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/cmd_line_parser.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/random_forest.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/find_optimal_parameters.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/least_squares.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/tokenizer.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/example_args.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/rls.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/lspi.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/blas_bindings/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/blas_bindings/blas_bindings_scal_axpy.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/blas_bindings/blas_bindings_dot.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/blas_bindings/blas_bindings_gemm.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/blas_bindings/blas_bindings_ger.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/blas_bindings/vector.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/blas_bindings/blas_bindings_gemv.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/sockets2.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/bridge.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/is_same_object.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/checkerboard.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/svm_multiclass_linear.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/hog_image.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/member_function_pointer.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test/correlation_tracker.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/graph/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/graph/graph_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/graph/graph_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/map/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/map/map_kernel_c.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/map/map_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/map/map_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sliding_buffer/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sliding_buffer/sliding_buffer_kernel_c.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sliding_buffer/sliding_buffer_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sliding_buffer/circular_buffer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sliding_buffer/sliding_buffer_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sliding_buffer/circular_buffer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/scan_image_pyramid_tools.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/correlation_tracker.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/full_object_detection.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/frontal_face_detector.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/full_object_detection_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/setup_hashed_features_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/correlation_tracker_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/frontal_face_detector_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/scan_image_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/scan_image_custom_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/shape_predictor_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/scan_image_custom.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/shape_predictor_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/scan_image_boxes.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/generic_image.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/object_detector_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/remove_unobtainable_rectangles.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/setup_hashed_features.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/box_overlap_testing_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/scan_image_boxes_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/render_face_detections_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/object_detector.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/shape_predictor.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/scan_fhog_pyramid.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/box_overlap_testing.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/scan_image_pyramid_tools_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/remove_unobtainable_rectangles_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/detection_template_tools.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/scan_image_pyramid.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/scan_fhog_pyramid_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/detection_template_tools_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/scan_image.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/shape_predictor_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/render_face_detections.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing/scan_image_pyramid_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_keypoint.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/rand.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_saver/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_saver/save_jpeg.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_saver/dng_shared.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_saver/save_png.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_saver/image_saver.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_saver/save_jpeg_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_saver/save_jpeg.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_saver/image_saver_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_saver/save_png.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_saver/save_png_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/travis/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/map.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/stack_trace.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/tokenizer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/member_function_pointer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/time_this.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/tokenizer/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/tokenizer/tokenizer_kernel_c.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/tokenizer/tokenizer_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/tokenizer/tokenizer_kernel_1.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/tokenizer/tokenizer_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/static_map/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/static_map/static_map_kernel_c.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/static_map/static_map_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/static_map/static_map_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/md5/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/md5/md5_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/md5/md5_kernel_1.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/md5/md5_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/directed_graph.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/linker.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/numeric_constants.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sockstreambuf/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sockstreambuf/sockstreambuf_unbuffered.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sockstreambuf/sockstreambuf_unbuffered.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sockstreambuf/sockstreambuf.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sockstreambuf/sockstreambuf_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sockstreambuf/sockstreambuf.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/graph_utils_threaded.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/CMakeLists.txt.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/iosockstream.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sqlite.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/graph_cuts.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/graph_cuts/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/graph_cuts/find_max_factor_graph_potts.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/graph_cuts/find_max_factor_graph_potts_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/graph_cuts/general_potts_problem.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/graph_cuts/graph_labeler_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/graph_cuts/general_flow_graph.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/graph_cuts/min_cut.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/graph_cuts/graph_labeler.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/graph_cuts/min_cut_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bits/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bits/c++config.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/crc32/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/crc32/crc32_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/crc32/crc32_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/data_io/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/data_io/mnist_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/data_io/cifar_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/data_io/cifar.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/data_io/mnist.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/data_io/load_image_dataset_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/data_io/load_image_dataset.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/data_io/image_dataset_metadata.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/data_io/cifar.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/data_io/mnist.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/data_io/libsvm_io.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/data_io/image_dataset_metadata.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/data_io/libsvm_io_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_decoder_model.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/fhog_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/lbp.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/label_connected_blobs.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/edge_detector_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/morphological_operations_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/interpolation.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/integral_image_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/thresholding_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/spatial_filtering.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/spatial_filtering_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/integral_image.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/draw.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/edge_detector.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/draw_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/random_color_transform_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/colormaps.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/segment_image_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/random_cropper_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/fhog.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/image_pyramid.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/assign_image_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/equalize_histogram.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/thresholding.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/equalize_histogram_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/morphological_operations.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/hough_transform.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/hough_transform_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/colormaps_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/random_cropper.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/segment_image.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/image_pyramid_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/assign_image.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/lbp_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/random_color_transform.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/interpolation_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms/label_connected_blobs_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/memory_manager_stateless.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_widgets.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/noncopyable.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sliding_buffer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/memory_manager.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/reference_counter/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/reference_counter/reference_counter_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/reference_counter/reference_counter_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bsp/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bsp/bsp.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bsp/bsp_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bsp/bsp.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/static_set/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/static_set/static_set_kernel_c.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/static_set/static_set_compare_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/static_set/static_set_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/static_set/static_set_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/static_set/static_set_compare_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/memory_manager_global/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/memory_manager_global/memory_manager_global_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/memory_manager_global/memory_manager_global_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/config.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/manifold_regularization.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/timeout.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/python/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/python/numpy_image.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/python/pybind_utils.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/python/pyassert.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/python/serialize_pickle.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/smart_pointers_thread_safe.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/error.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/memory_manager_stateless/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/memory_manager_stateless/memory_manager_stateless_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/memory_manager_stateless/memory_manager_stateless_kernel_2.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/memory_manager_stateless/memory_manager_stateless_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dnn/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dnn/solvers_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dnn/core_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dnn/trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dnn/layers_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dnn/misc.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dnn/validation.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dnn/input_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dnn/loss_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dnn/core.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dnn/layers.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dnn/trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dnn/utilities_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dnn/loss.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dnn/utilities.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dnn/solvers.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dnn/input.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/misc_api.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sequence.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/linker/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/linker/linker_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/linker/linker_kernel_1.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/linker/linker_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cpp_tokenizer/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cpp_tokenizer/cpp_tokenizer_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cpp_tokenizer/cpp_tokenizer_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cpp_tokenizer/cpp_tokenizer_kernel_c.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/string/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/string/string_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/string/string.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/misc_api/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/misc_api/posix.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/misc_api/misc_api_kernel_2.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/misc_api/misc_api_kernel_1.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/misc_api/windows.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/misc_api/misc_api_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/misc_api/misc_api_kernel_2.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/misc_api/misc_api_shared.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/misc_api/misc_api_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/stack.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_encoder_model.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_transforms.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/pybind11/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/pybind11/tools/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/pybind11/include/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/pybind11/include/pybind11/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/pybind11/include/pybind11/detail/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/pybind11/include/pybind11/detail/class.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/pybind11/include/pybind11/detail/descr.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/pybind11/include/pybind11/detail/init.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/pybind11/include/pybind11/detail/typeid.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/pybind11/include/pybind11/detail/common.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/pybind11/include/pybind11/detail/internals.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/pybind11/include/pybind11/pybind11.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/pybind11/include/pybind11/pytypes.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/pybind11/include/pybind11/complex.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/pybind11/include/pybind11/cast.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/pybind11/include/pybind11/functional.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/pybind11/include/pybind11/chrono.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/pybind11/include/pybind11/buffer_info.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/pybind11/include/pybind11/eigen.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/pybind11/include/pybind11/attr.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/pybind11/include/pybind11/stl.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/pybind11/include/pybind11/iostream.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/pybind11/include/pybind11/eval.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/pybind11/include/pybind11/common.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/pybind11/include/pybind11/operators.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/pybind11/include/pybind11/stl_bind.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/pybind11/include/pybind11/options.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/pybind11/include/pybind11/embed.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/pybind11/include/pybind11/numpy.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/zlib/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/zlib/zutil.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/zlib/gzread.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/zlib/gzwrite.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/zlib/deflate.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/zlib/zlib.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/zlib/trees.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/zlib/gzlib.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/zlib/compress.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/zlib/infback.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/zlib/trees.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/zlib/adler32.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/zlib/zutil.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/zlib/inffast.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/zlib/crc32.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/zlib/deflate.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/zlib/crc32.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/zlib/uncompr.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/zlib/inffixed.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/zlib/inftrees.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/zlib/inflate.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/zlib/inftrees.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/zlib/gzclose.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/zlib/gzguts.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/zlib/inffast.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/zlib/inflate.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/zlib/zconf.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libpng/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libpng/png.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libpng/pngrutil.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libpng/pngstruct.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libpng/pngtrans.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libpng/png.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libpng/pngconf.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libpng/pngerror.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libpng/pngwrite.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libpng/pngrio.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libpng/pngmem.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libpng/pngwutil.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libpng/pngget.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libpng/pngdebug.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libpng/pnglibconf.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libpng/arm/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libpng/arm/arm_init.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libpng/arm/filter_neon_intrinsics.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libpng/pngwtran.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libpng/pngread.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libpng/pngwio.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libpng/pngrtran.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libpng/pngpriv.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libpng/pngset.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libpng/pnginfo.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libpng/pngpread.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_drot.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_zgerc.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_chpmv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dtbmv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_scopy.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_sspmv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_chpr2.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_ctpsv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dtrmv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_cher2.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_cgemv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_ztrsm.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_snrm2.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dgbmv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_csyrk.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_zdotc_sub.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dsymm.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dtrmm.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_scnrm2.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_zcopy.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_ssyr.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_ssbmv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dspr2.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_sswap.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_drotmg.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_zswap.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dtpmv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dsyr2.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_chbmv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dger.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_zhemm.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dspmv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_sasum.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_isamax.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_sgemm.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_zdscal.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_zher2k.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_strsv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_ctrsm.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_cher.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_idamax.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_izamax.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_ctrmv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_sdsdot.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dswap.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_sdot.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_strsm.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_csyr2k.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dnrm2.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_ctpmv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dsyrk.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_zher2.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dznrm2.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_ssyrk.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_srotm.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_ctbmv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dgemm.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_zhpr.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_zsyrk.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_zscal.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_drotg.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_zhemv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_zherk.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dzasum.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dsdot.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_ztpsv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_zhbmv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_caxpy.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_sspr2.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dtpsv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_sger.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_cdotu_sub.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_ssyr2.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dasum.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dtbsv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_icamax.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_cgeru.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_cswap.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_cscal.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_xerbla.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_stpsv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_stpmv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_ztrsv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_srot.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_cherk.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_csymm.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_zdotu_sub.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_stbsv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dgemv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_f77.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_ssyr2k.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dsyr2k.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_zsymm.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_sscal.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_ztrmm.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_ccopy.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_cgerc.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dsymv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_stbmv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_zgeru.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_ztrmv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_sgbmv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_zhpmv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_csscal.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_cdotc_sub.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_drotm.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dtrsv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dscal.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_zgemv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_ctrmm.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_srotg.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_sspr.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_saxpy.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dspr.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_ztpmv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_zgbmv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dtrsm.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_zhpr2.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_cgbmv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_zgemm.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_ztbsv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_strmm.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_ctbsv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_ctrsv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_zsyr2k.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_srotmg.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_strmv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_ssymm.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_zher.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_zaxpy.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dsyr.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_ssymv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_cher2k.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_daxpy.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_ddot.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_scasum.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_ztbmv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dcopy.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_sgemv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_chemm.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_chpr.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_cgemm.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_chemv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/cblas/cblas_dsbmv.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jerror.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jmemnobs.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jidctfst.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jdatasrc.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jfdctfst.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/rdbmp.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/transupp.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jcparam.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/rdcolmap.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jdtrans.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jdmainct.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jddctmgr.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jcprepct.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jversion.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jquant2.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jcdctmgr.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jidctint.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jpegint.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jdcolor.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/rdswitch.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jdmaster.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jdmerge.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jdmarker.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jcapistd.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jcarith.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jdinput.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/wrjpgcom.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/wrbmp.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/wrtarga.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jinclude.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jmemsys.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jcinit.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jaricom.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jdcoefct.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jcomapi.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/rdrle.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jpegtran.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jdhuff.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jerror.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/rdjpgcom.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/rdppm.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jidctflt.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/cdjpeg.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jconfig.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jmemname.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jcsample.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jmemmgr.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/cderror.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jcmainct.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jquant1.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/rdgif.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jdsample.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jdct.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jdapistd.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/wrppm.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/wrgif.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/transupp.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jchuff.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jdarith.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jmemansi.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jfdctint.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jdpostct.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jmorecfg.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jccoefct.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jcmaster.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/wrrle.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jutils.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jccolor.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jdatadst.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jdapimin.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jfdctflt.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jcmarker.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jctrans.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jpeglib.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/rdtarga.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/external/libjpeg/jcapimin.c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/random_forest/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/random_forest/random_forest_regression_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/random_forest/random_forest_regression.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/type_safe_union.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matlab/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matlab/example_mex_struct.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matlab/call_matlab.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matlab/example_mex_function.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matlab/mex_wrapper.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matlab/subprocess_stream.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matlab/example_mex_callback.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matlab/subprocess_stream.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matlab/example_mex_class.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bigint/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bigint/bigint_kernel_2.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bigint/bigint_kernel_c.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bigint/bigint_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bigint/bigint_kernel_2.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bigint/bigint_kernel_1.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bigint/bigint_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/memory_manager/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/memory_manager/memory_manager_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/memory_manager/memory_manager_kernel_3.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/memory_manager/memory_manager_kernel_2.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/memory_manager/memory_manager_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sqlite/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sqlite/sqlite.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sqlite/sqlite_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sqlite/sqlite_tools.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sqlite/sqlite_tools_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cpp_tokenizer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bayes_utils.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/thread_specific_data_extension.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/create_new_thread_extension.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/posix.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/threads_kernel_1.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/auto_unlock_extension_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/auto_unlock_extension.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/thread_function_extension_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/multithreaded_object_extension.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/thread_pool_extension.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/thread_specific_data_extension_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/rmutex_extension.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/create_new_thread_extension_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/threads_kernel_2.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/read_write_mutex_extension_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/auto_mutex_extension.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/rsignaler_extension.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/thread_pool_extension.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/threaded_object_extension_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/threads_kernel_shared.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/windows.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/async.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/threads_kernel_2.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/multithreaded_object_extension_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/threaded_object_extension.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/threaded_object_extension.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/parallel_for_extension.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/threads_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/auto_mutex_extension_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/thread_pool_extension_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/thread_function_extension.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/rsignaler_extension_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/read_write_mutex_extension.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/async.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/async_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/rmutex_extension_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/threads_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/threads_kernel_shared.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/parallel_for_extension_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/multithreaded_object_extension.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads/threads_kernel.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/pipe.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_core/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_core/gui_core_kernel_2.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_core/gui_core_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_core/windows.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_core/gui_core_kernel_2.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_core/gui_core_kernel_1.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_core/xlib.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_core/gui_core_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_keypoint/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_keypoint/build_separable_poly_filters.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_keypoint/nearest_neighbor_feature_image_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_keypoint/draw_surf_points_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_keypoint/surf.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_keypoint/hog_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_keypoint/nearest_neighbor_feature_image.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_keypoint/surf_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_keypoint/poly_image.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_keypoint/hessian_pyramid.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_keypoint/binned_vector_feature_image_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_keypoint/fine_hog_image.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_keypoint/hashed_feature_image.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_keypoint/binned_vector_feature_image.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_keypoint/poly_image_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_keypoint/hashed_feature_image_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_keypoint/hog.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_keypoint/fine_hog_image_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_keypoint/hessian_pyramid_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_keypoint/draw_surf_points.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/byte_orderer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/unicode.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/svm_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/svm_c_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/krr_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/structural_svm_sequence_labeling_problem_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/cross_validate_sequence_segmenter_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/krls.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/one_vs_all_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/rbf_network_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/structural_assignment_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/svr_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/svm_rank_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/structural_svm_object_detection_problem_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/null_df.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/cross_validate_graph_labeling_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/krr_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/kkmeans_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/roc_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/null_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/svm_threaded_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/feature_ranking_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/pegasos.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/structural_svm_graph_labeling_problem.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/sort_basis_vectors.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/one_vs_one_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/kcentroid_overloads.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/cross_validate_object_detection_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/svm_multiclass_linear_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/sort_basis_vectors_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/svm.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/svm_rank_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/rvm.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/svm_c_linear_dcd_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/structural_svm_distributed.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/cross_validate_graph_labeling_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/rbf_network.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/svm_c_linear_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/svm_c_ekm_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/structural_svm_distributed_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/structural_svm_problem_threaded_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/svm_one_class_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/structural_sequence_segmentation_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/function_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/rvm_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/simplify_linear_decision_function_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/one_vs_one_decision_function_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/structural_graph_labeling_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/simplify_linear_decision_function.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/cross_validate_assignment_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/svr_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/structural_svm_assignment_problem_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/svr_linear_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/reduced.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/sequence_labeler.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/structural_track_association_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/one_vs_all_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/assignment_function_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/cross_validate_multiclass_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/structural_sequence_labeling_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/structural_svm_graph_labeling_problem_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/track_association_function.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/svm_nu_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/sparse_vector.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/svm_c_linear_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/num_nonnegative_weights.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/kernel_matrix.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/cross_validate_regression_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/cross_validate_sequence_segmenter.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/structural_sequence_segmentation_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/structural_object_detection_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/linearly_independent_subset_finder_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/sequence_labeler_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/krls_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/structural_svm_problem_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/multiclass_tools_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/svm_multiclass_linear_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/cross_validate_track_association_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/svr_linear_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/kcentroid_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/active_learning.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/one_vs_one_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/structural_object_detection_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/structural_graph_labeling_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/rls_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/assignment_function.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/cross_validate_regression_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/svm_threaded.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/sparse_vector_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/cross_validate_assignment_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/svm_nu_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/rr_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/sparse_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/cross_validate_multiclass_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/one_vs_one_decision_function.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/svm_c_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/multiclass_tools.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/cross_validate_sequence_labeler.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/kcentroid.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/pegasos_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/structural_svm_problem_threaded.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/structural_svm_problem.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/structural_svm_object_detection_problem.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/svm_one_class_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/active_learning_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/structural_track_association_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/one_vs_all_decision_function_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/structural_svm_sequence_labeling_problem.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/ranking_tools_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/sequence_segmenter.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/reduced_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/structural_sequence_labeling_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/track_association_function_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/kernel.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/sparse_kernel.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/structural_assignment_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/empirical_kernel_map.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/kkmeans.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/null_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/cross_validate_sequence_labeler_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/structural_svm_assignment_problem.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/empirical_kernel_map_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/auto_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/cross_validate_track_association_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/svm_c_linear_dcd_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/one_vs_all_decision_function.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/cross_validate_object_detection_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/kernel_matrix_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/auto.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/svm_c_ekm_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/rr_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/sequence_segmenter_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/linearly_independent_subset_finder.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/auto.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/function.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/feature_ranking.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/rls.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/roc_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm/ranking_tools.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/uintn.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_loader/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_loader/load_image.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_loader/png_loader.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_loader/image_loader.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_loader/jpeg_loader.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_loader/image_loader_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_loader/png_loader_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_loader/jpeg_loader.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_loader/jpeg_loader_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_loader/load_image_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_loader/png_loader.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/byte_orderer/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/byte_orderer/byte_orderer_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/byte_orderer/byte_orderer_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/clustering.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/member_function_pointer/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/member_function_pointer/make_mfp.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/member_function_pointer/make_mfp_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/member_function_pointer/member_function_pointer_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/member_function_pointer/member_function_pointer_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/stack/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/stack/stack_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/stack/stack_kernel_c.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/stack/stack_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/set_utils/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/set_utils/set_utils_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/set_utils/set_utils.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/set_utils.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/geometry.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sparse_vector.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/crc32.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/graph_utils.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/vectorstream.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bound_function_pointer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/md5.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/geometry/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/geometry/rectangle.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/geometry/line_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/geometry/vector_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/geometry/rectangle_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/geometry/border_enumerator.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/geometry/drectangle_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/geometry/line.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/geometry/point_transforms_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/geometry/point_transforms.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/geometry/vector.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/geometry/border_enumerator_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/geometry/drectangle.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sockstreambuf.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/rand/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/rand/mersenne_twister.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/rand/rand_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/rand/rand_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/conditioning_class/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/conditioning_class/conditioning_class_kernel_4.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/conditioning_class/conditioning_class_kernel_2.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/conditioning_class/conditioning_class_kernel_c.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/conditioning_class/conditioning_class_kernel_3.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/conditioning_class/conditioning_class_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/conditioning_class/conditioning_class_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/server.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/manifold_regularization/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/manifold_regularization/linear_manifold_regularizer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/manifold_regularization/linear_manifold_regularizer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dir_nav.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/stl_checked/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/stl_checked/std_vector_c_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/stl_checked/std_vector_c.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/disjoint_subsets.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/compress_stream.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/lsh/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/lsh/create_random_projection_hash_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/lsh/hashes_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/lsh/hashes.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/lsh/create_random_projection_hash.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/lsh/projection_hash_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/lsh/projection_hash.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/timing.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bayes_utils/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bayes_utils/bayes_utils.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bayes_utils/bayes_utils_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/hash_map/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/hash_map/hash_map_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/hash_map/hash_map_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/hash_map/hash_map_kernel_c.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/queue.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/opencv/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/opencv/cv_image.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/opencv/to_open_cv_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/opencv/to_open_cv.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/opencv/cv_image_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/timeout/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/timeout/timeout.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/timeout/timeout_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bridge.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cmd_line_parser/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cmd_line_parser/get_option.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cmd_line_parser/get_option_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cmd_line_parser/cmd_line_parser_check_c.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cmd_line_parser/cmd_line_parser_kernel_c.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cmd_line_parser/cmd_line_parser_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cmd_line_parser/cmd_line_parser_check_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cmd_line_parser/cmd_line_parser_print_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cmd_line_parser/cmd_line_parser_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/graph.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/control.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/static_set.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/pixel.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cuda/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cuda/cuda_data_ptr.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cuda/tensor_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cuda/cusolver_dlibapi.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cuda/cuda_errors.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cuda/gpu_data.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cuda/tensor.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cuda/cudnn_dlibapi.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cuda/tensor_tools.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cuda/curand_dlibapi.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cuda/cuda_utils.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cuda/cpu_dlib.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cuda/gpu_data.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cuda/cuda_dlib.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cuda/tensor_tools.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cuda/cudnn_dlibapi.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cuda/curand_dlibapi.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cuda/cublas_dlibapi.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cuda/cpu_dlib.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cuda/gpu_data_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cuda/cuda_data_ptr.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cuda/cublas_dlibapi.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/global_optimization.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/server/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/server/server_iostream.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/server/server_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/server/server_iostream_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/server/server_kernel.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/server/server_http_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/server/server_iostream.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/server/server_http.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/server/server_http.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/server/server_kernel.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/lz77_buffer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/conditioning_class.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/queue/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/queue/queue_sort_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/queue/queue_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/queue/queue_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/queue/queue_kernel_2.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/queue/queue_kernel_c.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/queue/queue_sort_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/logger/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/logger/extra_logger_headers.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/logger/logger_config_file.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/logger/logger_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/logger/logger_config_file.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/logger/logger_kernel_1.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/logger/extra_logger_headers.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/logger/logger_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/lzp_buffer/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/lzp_buffer/lzp_buffer_kernel_c.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/lzp_buffer/lzp_buffer_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/lzp_buffer/lzp_buffer_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/lzp_buffer/lzp_buffer_kernel_2.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cpp_pretty_printer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/statistics/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/statistics/statistics.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/statistics/vector_normalizer_frobmetric_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/statistics/dpca_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/statistics/sammon_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/statistics/cca.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/statistics/sammon.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/statistics/average_precision_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/statistics/statistics_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/statistics/random_subset_selector_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/statistics/average_precision.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/statistics/image_feature_sampling.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/statistics/vector_normalizer_frobmetric.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/statistics/running_gradient.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/statistics/lda.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/statistics/running_gradient_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/statistics/cca_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/statistics/lda_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/statistics/image_feature_sampling_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/statistics/random_subset_selector.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/statistics/dpca.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/base64/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/base64/base64_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/base64/base64_kernel_1.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/base64/base64_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/threads.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/hash_set/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/hash_set/hash_set_kernel_c.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/hash_set/hash_set_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/hash_set/hash_set_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/graph_utils/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/graph_utils/find_k_nearest_neighbors_lsh_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/graph_utils/graph_utils_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/graph_utils/sample_pair_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/graph_utils/sample_pair.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/graph_utils/graph_utils.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/graph_utils/function_objects_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/graph_utils/function_objects.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/graph_utils/ordered_sample_pair.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/graph_utils/find_k_nearest_neighbors_lsh.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/graph_utils/edge_list_graphs_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/graph_utils/ordered_sample_pair_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/graph_utils/edge_list_graphs.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/config_reader.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bit_stream/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bit_stream/bit_stream_multi_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bit_stream/bit_stream_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bit_stream/bit_stream_kernel_1.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bit_stream/bit_stream_multi_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bit_stream/bit_stream_kernel_c.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bit_stream/bit_stream_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bit_stream/bit_stream_multi_c.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/static_map.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/windows_magic.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_encoder.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/unicode/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/unicode/unicode_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/unicode/unicode.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/unicode/unicode.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/svm_threaded.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/pipe/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/pipe/pipe_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/pipe/pipe_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/vectorstream/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/vectorstream/unserialize_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/vectorstream/vectorstream.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/vectorstream/vectorstream_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/vectorstream/unserialize.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/http_client/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/http_client/http_client_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/http_client/http_client.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/http_client/http_client.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/quantum_computing/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/quantum_computing/quantum_computing.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/quantum_computing/quantum_computing_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test_for_odr_violations.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_core.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/any/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/any/any_trainer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/any/any_decision_function_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/any/any_function.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/any/any_function_impl2.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/any/any_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/any/any_decision_function.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/any/any_function_impl.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/any/any_trainer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/any/any_function_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/any/any.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/ref.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/timer/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/timer/timer.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/timer/timer_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/timer/timer.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/timer/timer_heavy.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/hash_table.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/float_details.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bigint.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/lsh.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/base64.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/lz77_buffer/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/lz77_buffer/lz77_buffer_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/lz77_buffer/lz77_buffer_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/lz77_buffer/lz77_buffer_kernel_2.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/lz77_buffer/lz77_buffer_kernel_c.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cpp_pretty_printer/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cpp_pretty_printer/cpp_pretty_printer_kernel_2.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cpp_pretty_printer/cpp_pretty_printer_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cpp_pretty_printer/cpp_pretty_printer_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/set.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/test_for_odr_violations.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/filtering/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/filtering/rls_filter.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/filtering/kalman_filter_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/filtering/kalman_filter.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/filtering/kalman_filter.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/filtering/rls_filter_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/smart_pointers.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/xml_parser/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/xml_parser/xml_parser_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/xml_parser/xml_parser_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/xml_parser/xml_parser_kernel_interfaces.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/iosockstream/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/iosockstream/iosockstream.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/iosockstream/iosockstream_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sockets.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/tuple/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/tuple/tuple_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/tuple/tuple.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/find_max_factor_graph_nmplp.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/find_max_parse_cky.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/isotonic_regression_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/optimization_search_strategies.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/isotonic_regression.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/find_max_factor_graph_viterbi_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/optimization.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/elastic_net_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/optimization_bobyqa.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/optimization_line_search.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/max_cost_assignment.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/optimization_solve_qp3_using_smo_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/optimization_solve_qp2_using_smo_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/optimization_search_strategies_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/find_max_factor_graph_viterbi.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/optimization_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/find_max_factor_graph_nmplp_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/optimization_line_search_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/optimization_stop_strategies_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/find_optimal_parameters.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/optimization_solve_qp2_using_smo.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/elastic_net.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/optimization_bobyqa_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/optimization_solve_qp_using_smo_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/find_optimal_parameters_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/max_cost_assignment_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/optimization_oca.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/optimization_least_squares_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/optimization_trust_region.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/optimization_solve_qp3_using_smo.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/optimization_stop_strategies.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/max_sum_submatrix_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/max_sum_submatrix.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/optimization_oca_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/find_max_parse_cky_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/optimization_solve_qp_using_smo.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/optimization_least_squares.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/optimization/optimization_trust_region_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/std_allocator.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/revision.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_encoder/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_encoder/entropy_encoder_kernel_c.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_encoder/entropy_encoder_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_encoder/entropy_encoder_kernel_2.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_encoder/entropy_encoder_kernel_1.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_encoder/entropy_encoder_kernel_2.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_encoder/entropy_encoder_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/numerical_integration/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/numerical_integration/integrate_function_adapt_simpson.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/numerical_integration/integrate_function_adapt_simpson_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/reference_counter.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_decoder/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_decoder/entropy_decoder_kernel_1.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_decoder/entropy_decoder_kernel_2.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_decoder/entropy_decoder_kernel_c.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_decoder/entropy_decoder_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_decoder/entropy_decoder_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_decoder/entropy_decoder_kernel_2.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/hash.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/config_reader/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/config_reader/config_reader_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/config_reader/config_reader_thread_safe_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/config_reader/config_reader_thread_safe_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/config_reader/config_reader_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bit_stream.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_decoder_model/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_decoder_model/entropy_decoder_model_kernel_2.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_decoder_model/entropy_decoder_model_kernel_4.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_decoder_model/entropy_decoder_model_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_decoder_model/entropy_decoder_model_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_decoder_model/entropy_decoder_model_kernel_3.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_decoder_model/entropy_decoder_model_kernel_5.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_decoder_model/entropy_decoder_model_kernel_6.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/unordered_pair.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/all/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/all/source.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/binary_search_tree/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/binary_search_tree/binary_search_tree_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/binary_search_tree/binary_search_tree_kernel_c.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/binary_search_tree/binary_search_tree_kernel_2.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/binary_search_tree/binary_search_tree_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/mlp/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/mlp/mlp_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/mlp/mlp_kernel_c.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/mlp/mlp_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/data_io.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cmake_utils/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cmake_utils/test_for_libpng/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cmake_utils/test_for_libpng/libpng_test.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cmake_utils/test_for_cpp11/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cmake_utils/test_for_cpp11/cpp11_test.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cmake_utils/test_for_neon/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cmake_utils/test_for_neon/neon_test.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cmake_utils/test_for_cuda/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cmake_utils/test_for_cudnn/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cmake_utils/test_for_sse4/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cmake_utils/test_for_sse4/this_file_doesnt_compile.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cmake_utils/test_for_sse4/sse4_test.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cmake_utils/test_for_libjpeg/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cmake_utils/test_for_libjpeg/libjpeg_test.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cmake_utils/test_for_avx/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cmake_utils/test_for_avx/this_file_doesnt_compile.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cmake_utils/test_for_avx/avx_test.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/string.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/compress_stream/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/compress_stream/compress_stream_kernel_2.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/compress_stream/compress_stream_kernel_3.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/compress_stream/compress_stream_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/compress_stream/compress_stream_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/opencv.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/serialize.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/global_optimization/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/global_optimization/upper_bound_function_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/global_optimization/find_max_global.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/global_optimization/upper_bound_function.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/global_optimization/global_function_search.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/global_optimization/global_function_search_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/global_optimization/find_max_global_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/global_optimization/global_function_search.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sequence/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sequence/sequence_kernel_c.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sequence/sequence_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sequence/sequence_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sequence/sequence_compare_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sequence/sequence_compare_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sequence/sequence_sort_2.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sequence/sequence_kernel_2.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sequence/sequence_sort_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sequence/sequence_sort_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/assert.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/stack_trace.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sort.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/array.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/java/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/java/java_array.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/java/swig_api.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_io.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/enable_if.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/tuple.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/type_safe_union/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/type_safe_union/type_safe_union_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/type_safe_union/type_safe_union_kernel.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/filtering.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/general_hash/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/general_hash/general_hash.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/general_hash/count_bits_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/general_hash/random_hashing_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/general_hash/murmur_hash3.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/general_hash/hash.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/general_hash/count_bits.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/general_hash/murmur_hash3_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/general_hash/random_hashing.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/general_hash/hash_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/hash_map.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sockets/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sockets/posix.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sockets/sockets_extensions.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sockets/sockets_extensions.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sockets/sockets_kernel_2.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sockets/sockets_kernel_1.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sockets/windows.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sockets/sockets_kernel_2.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sockets/sockets_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sockets/sockets_extensions_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sockets/sockets_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/xml_parser.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/cmd_line_parser.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/random_forest.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/clustering/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/clustering/spectral_cluster_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/clustering/modularity_clustering_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/clustering/chinese_whispers_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/clustering/spectral_cluster.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/clustering/bottom_up_cluster_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/clustering/chinese_whispers.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/clustering/bottom_up_cluster.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/clustering/modularity_clustering.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/platform.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/array/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/array/array_kernel.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/array/array_tools_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/array/array_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/array/array_tools.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_widgets/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_widgets/drawable.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_widgets/base_widgets.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_widgets/widgets.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_widgets/canvas_drawing.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_widgets/base_widgets.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_widgets/fonts_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_widgets/drawable.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_widgets/style_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_widgets/canvas_drawing.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_widgets/nativefont.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_widgets/style.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_widgets/widgets.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_widgets/fonts.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_widgets/drawable_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_widgets/fonts.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_widgets/style.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_widgets/widgets_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_widgets/base_widgets_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/gui_widgets/canvas_drawing_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_assign.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_conv_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_generic_image.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_mat_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_read_from_istream.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/lapack/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/lapack/geev.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/lapack/gesvd.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/lapack/syev.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/lapack/geqrf.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/lapack/gesdd.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/lapack/fortran_id.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/lapack/ormqr.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/lapack/getrf.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/lapack/syevr.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/lapack/pbtrf.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/lapack/potrf.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/lapack/gees.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_utilities.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_conv.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_subexp.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_fft_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_la_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_mat.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_default_mul.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/fft_size.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_eigenvalue.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/kiss_fft.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/mkl_fft.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_lu.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/symmetric_matrix_cache.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/cblas_constants.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_data_layout_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_blas_bindings.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_qr.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_fft.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_math_functions_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_fwd.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_expressions.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_conj_trans.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/symmetric_matrix_cache_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_exp_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_exp.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_subexp_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_la.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_data_layout.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_utilities_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_trsm.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_op.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_assign_fwd.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_cholesky.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/matrix/matrix_math_functions.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/logger.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sync_extension/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sync_extension/sync_extension_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sync_extension/sync_extension_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/numerical_integration.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/disjoint_subsets/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/disjoint_subsets/disjoint_subsets_sized.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/disjoint_subsets/disjoint_subsets_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/disjoint_subsets/disjoint_subsets.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/disjoint_subsets/disjoint_subsets_sized_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_encoder_model/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_encoder_model/entropy_encoder_model_kernel_5.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_encoder_model/entropy_encoder_model_kernel_4.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_encoder_model/entropy_encoder_model_kernel_2.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_encoder_model/entropy_encoder_model_kernel_3.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_encoder_model/entropy_encoder_model_kernel_6.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_encoder_model/entropy_encoder_model_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_encoder_model/entropy_encoder_model_kernel_c.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/entropy_encoder_model/entropy_encoder_model_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bsp.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/any.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/sync_extension.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/simd.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dnn.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/python.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/metaprogramming.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/hash_set.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/stl_checked.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/interfaces/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/interfaces/remover.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/interfaces/enumerable.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/interfaces/map_pair.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/interfaces/cmd_line_parser_option.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/control/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/control/lspi_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/control/approximate_linear_models_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/control/lspi.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/control/mpc_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/control/approximate_linear_models.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/control/mpc.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/console_progress_indicator.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/image_processing.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/hash_table/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/hash_table/hash_table_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/hash_table/hash_table_kernel_2.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/hash_table/hash_table_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/hash_table/hash_table_kernel_c.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/mlp.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/directed_graph/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/directed_graph/directed_graph_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/directed_graph/directed_graph_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dir_nav/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dir_nav/dir_nav_kernel_1.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dir_nav/dir_nav_kernel_2.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dir_nav/posix.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dir_nav/dir_nav_extensions_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dir_nav/dir_nav_kernel_2.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dir_nav/dir_nav_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dir_nav/dir_nav_extensions.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dir_nav/windows.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dir_nav/dir_nav_extensions.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/dir_nav/dir_nav_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/appveyor/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bound_function_pointer/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bound_function_pointer/bound_function_pointer_kernel_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bound_function_pointer/bound_function_pointer_kernel_1.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bridge/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bridge/bridge.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib/bridge/bridge_abstract.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/bigplus.gif ViennaRNA-2.5.0/src/dlib-19.22/docs/faq.html ViennaRNA-2.5.0/src/dlib-19.22/docs/train_shape_predictor_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/std_allocator_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/svm_sparse_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/books.html ViennaRNA-2.5.0/src/dlib-19.22/docs/thread_function_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/object_detector_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/custom_trainer_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/rbf_small_gamma.gif ViennaRNA-2.5.0/src/dlib-19.22/docs/face_detection_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/kernel_3a.html ViennaRNA-2.5.0/src/dlib-19.22/docs/examples/ ViennaRNA-2.5.0/src/dlib-19.22/docs/examples/CMakeLists.txt.html ViennaRNA-2.5.0/src/dlib-19.22/docs/logger_ex_2.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/other.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dnn_mmod_train_find_cars_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/video_tracking_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/hubble_ultra_deep_field.jpg ViennaRNA-2.5.0/src/dlib-19.22/docs/parsing.html ViennaRNA-2.5.0/src/dlib-19.22/docs/random_cropper_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/one_class_classifiers_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/mpc_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/3d_point_cloud_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/kernel_1ea.html ViennaRNA-2.5.0/src/dlib-19.22/docs/kcentroid_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/bsp_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/compression.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dnn_inception_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/fhog_object_detector_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dnn_introduction2_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/kernel_1ec.html ViennaRNA-2.5.0/src/dlib-19.22/docs/object_detector_advanced_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/license.html ViennaRNA-2.5.0/src/dlib-19.22/docs/least_squares_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/parallel_for_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/johns/ ViennaRNA-2.5.0/src/dlib-19.22/docs/johns/John_Savage/ ViennaRNA-2.5.0/src/dlib-19.22/docs/johns/John_Simm/ ViennaRNA-2.5.0/src/dlib-19.22/docs/johns/John_Schneider/ ViennaRNA-2.5.0/src/dlib-19.22/docs/johns/John_Salley/ ViennaRNA-2.5.0/src/dlib-19.22/docs/johns/John_Shimkus/ ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib-logo.png ViennaRNA-2.5.0/src/dlib-19.22/docs/dnn_dcgan_train_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dnn_semantic_segmentation_train_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dnn_semantic_segmentation_ex.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/webcam_face_pose_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/global_optimization.py.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dnn_instance_segmentation_train_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/iosockstream_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/find_max_global_example.webm ViennaRNA-2.5.0/src/dlib-19.22/docs/linear_manifold_regularizer_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/python/ ViennaRNA-2.5.0/src/dlib-19.22/docs/python/_images/ ViennaRNA-2.5.0/src/dlib-19.22/docs/python/_images/dlib-logo.png ViennaRNA-2.5.0/src/dlib-19.22/docs/python/_static/ ViennaRNA-2.5.0/src/dlib-19.22/docs/python/_static/minus.png ViennaRNA-2.5.0/src/dlib-19.22/docs/python/_static/underscore.js ViennaRNA-2.5.0/src/dlib-19.22/docs/python/_static/down.png ViennaRNA-2.5.0/src/dlib-19.22/docs/python/_static/doctools.js ViennaRNA-2.5.0/src/dlib-19.22/docs/python/_static/sidebar.js ViennaRNA-2.5.0/src/dlib-19.22/docs/python/_static/classic.css ViennaRNA-2.5.0/src/dlib-19.22/docs/python/_static/up.png ViennaRNA-2.5.0/src/dlib-19.22/docs/python/_static/plus.png ViennaRNA-2.5.0/src/dlib-19.22/docs/python/_static/pygments.css ViennaRNA-2.5.0/src/dlib-19.22/docs/python/_static/ajax-loader.gif ViennaRNA-2.5.0/src/dlib-19.22/docs/python/_static/websupport.js ViennaRNA-2.5.0/src/dlib-19.22/docs/python/_static/comment-bright.png ViennaRNA-2.5.0/src/dlib-19.22/docs/python/_static/comment-close.png ViennaRNA-2.5.0/src/dlib-19.22/docs/python/_static/up-pressed.png ViennaRNA-2.5.0/src/dlib-19.22/docs/python/_static/down-pressed.png ViennaRNA-2.5.0/src/dlib-19.22/docs/python/_static/comment.png ViennaRNA-2.5.0/src/dlib-19.22/docs/python/_static/default.css ViennaRNA-2.5.0/src/dlib-19.22/docs/python/_static/file.png ViennaRNA-2.5.0/src/dlib-19.22/docs/python/_static/searchtools.js ViennaRNA-2.5.0/src/dlib-19.22/docs/python/_static/basic.css ViennaRNA-2.5.0/src/dlib-19.22/docs/python/_static/jquery.js ViennaRNA-2.5.0/src/dlib-19.22/docs/python/genindex.html ViennaRNA-2.5.0/src/dlib-19.22/docs/python/py-modindex.html ViennaRNA-2.5.0/src/dlib-19.22/docs/python/objects.inv ViennaRNA-2.5.0/src/dlib-19.22/docs/python/search.html ViennaRNA-2.5.0/src/dlib-19.22/docs/python/index.html ViennaRNA-2.5.0/src/dlib-19.22/docs/python/_sources/ ViennaRNA-2.5.0/src/dlib-19.22/docs/python/_sources/index.txt ViennaRNA-2.5.0/src/dlib-19.22/docs/python/.buildinfo ViennaRNA-2.5.0/src/dlib-19.22/docs/python/searchindex.js ViennaRNA-2.5.0/src/dlib-19.22/docs/logger_custom_output_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib.css ViennaRNA-2.5.0/src/dlib-19.22/docs/opencv_webcam_face_detection.py.html ViennaRNA-2.5.0/src/dlib-19.22/docs/vs_mode_3.png ViennaRNA-2.5.0/src/dlib-19.22/docs/queue_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/watershed.webm ViennaRNA-2.5.0/src/dlib-19.22/docs/image_gradient_xy.jpg ViennaRNA-2.5.0/src/dlib-19.22/docs/bayes_net_gui_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/svm_rank_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/multiclass_classification_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/resnet.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/quadratic_image_models_IGARSS2013.pdf ViennaRNA-2.5.0/src/dlib-19.22/docs/kernel_1db.html ViennaRNA-2.5.0/src/dlib-19.22/docs/rank_features_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/ml.html ViennaRNA-2.5.0/src/dlib-19.22/docs/train_object_detector.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/metaprogramming.html ViennaRNA-2.5.0/src/dlib-19.22/docs/empirical_kernel_map_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/git-logs.html ViennaRNA-2.5.0/src/dlib-19.22/docs/bayes_net_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/image_gradient_xx.jpg ViennaRNA-2.5.0/src/dlib-19.22/docs/bigminus.gif ViennaRNA-2.5.0/src/dlib-19.22/docs/enable_if.html ViennaRNA-2.5.0/src/dlib-19.22/docs/server_http_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/thread_pool_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/learning_to_track_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/krr_classification_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dnn_mmod_face_detection_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/algorithms.html ViennaRNA-2.5.0/src/dlib-19.22/docs/timer_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/guipics/ ViennaRNA-2.5.0/src/dlib-19.22/docs/guipics/button.png ViennaRNA-2.5.0/src/dlib-19.22/docs/guipics/open_file_box.png ViennaRNA-2.5.0/src/dlib-19.22/docs/guipics/list_box.png ViennaRNA-2.5.0/src/dlib-19.22/docs/guipics/label.png ViennaRNA-2.5.0/src/dlib-19.22/docs/guipics/text_grid.png ViennaRNA-2.5.0/src/dlib-19.22/docs/guipics/tabbed_display.png ViennaRNA-2.5.0/src/dlib-19.22/docs/guipics/text_box.png ViennaRNA-2.5.0/src/dlib-19.22/docs/guipics/check_box.png ViennaRNA-2.5.0/src/dlib-19.22/docs/guipics/menu_bar.png ViennaRNA-2.5.0/src/dlib-19.22/docs/guipics/directed_graph_drawer.png ViennaRNA-2.5.0/src/dlib-19.22/docs/guipics/text_field.png ViennaRNA-2.5.0/src/dlib-19.22/docs/guipics/named_rectangle.png ViennaRNA-2.5.0/src/dlib-19.22/docs/guipics/radio_button.png ViennaRNA-2.5.0/src/dlib-19.22/docs/guipics/scroll_bar.png ViennaRNA-2.5.0/src/dlib-19.22/docs/guipics/open_existing_file_box.png ViennaRNA-2.5.0/src/dlib-19.22/docs/guipics/mouse_tracker.png ViennaRNA-2.5.0/src/dlib-19.22/docs/guipics/image_window.jpg ViennaRNA-2.5.0/src/dlib-19.22/docs/guipics/save_file_box.png ViennaRNA-2.5.0/src/dlib-19.22/docs/guipics/perspective_window.png ViennaRNA-2.5.0/src/dlib-19.22/docs/guipics/message_box.png ViennaRNA-2.5.0/src/dlib-19.22/docs/guipics/popup_menu.png ViennaRNA-2.5.0/src/dlib-19.22/docs/threaded_object_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/minus.gif ViennaRNA-2.5.0/src/dlib-19.22/docs/optimization_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/optimization.html ViennaRNA-2.5.0/src/dlib-19.22/docs/graph_labeling_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/bayes.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib-icon-32.png ViennaRNA-2.5.0/src/dlib-19.22/docs/vs_mode_1.png ViennaRNA-2.5.0/src/dlib-19.22/docs/threads_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/term_index.html ViennaRNA-2.5.0/src/dlib-19.22/docs/member_function_pointer_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/release_notes.html ViennaRNA-2.5.0/src/dlib-19.22/docs/hough_transform_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dnn_imagenet_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/heatmap.png ViennaRNA-2.5.0/src/dlib-19.22/docs/svr_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dnn_mmod_find_cars_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/sequence_segmenter.py.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dnn_instance_segmentation_ex.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib-icon-64.png ViennaRNA-2.5.0/src/dlib-19.22/docs/faces/ ViennaRNA-2.5.0/src/dlib-19.22/docs/intro.html ViennaRNA-2.5.0/src/dlib-19.22/docs/face_recognition.py.html ViennaRNA-2.5.0/src/dlib-19.22/docs/kernel_1eb.html ViennaRNA-2.5.0/src/dlib-19.22/docs/max_cost_assignment.py.html ViennaRNA-2.5.0/src/dlib-19.22/docs/rvm_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/matrix_expressions_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/multithreaded_object_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/pascal_voc_2012.h.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dnn_mmod_find_cars2_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/sequence_segmenter_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/using_custom_kernels_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/ml_guide.svg ViennaRNA-2.5.0/src/dlib-19.22/docs/image_gradient_y.jpg ViennaRNA-2.5.0/src/dlib-19.22/docs/face_landmark_detection_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/tiled_pyramid_example.jpg ViennaRNA-2.5.0/src/dlib-19.22/docs/boost.png ViennaRNA-2.5.0/src/dlib-19.22/docs/face_clustering.py.html ViennaRNA-2.5.0/src/dlib-19.22/docs/cnn_face_detector.py.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dnn_metric_learning_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/svm_struct.py.html ViennaRNA-2.5.0/src/dlib-19.22/docs/video_frames/ ViennaRNA-2.5.0/src/dlib-19.22/docs/kernel_1b.html ViennaRNA-2.5.0/src/dlib-19.22/docs/kkmeans_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/train_object_detector.py.html ViennaRNA-2.5.0/src/dlib-19.22/docs/containers.html ViennaRNA-2.5.0/src/dlib-19.22/docs/find_candidate_object_locations.py.html ViennaRNA-2.5.0/src/dlib-19.22/docs/kernel_2a.html ViennaRNA-2.5.0/src/dlib-19.22/docs/bridge_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/watershed.png ViennaRNA-2.5.0/src/dlib-19.22/docs/dnn_imagenet_train_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dnn_introduction_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/rvm_regression_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/quantum_computing_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/mlp_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/svm_binary_classifier.py.html ViennaRNA-2.5.0/src/dlib-19.22/docs/face_detector.py.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dnn_introduction3_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/vs-cmake-gui.png ViennaRNA-2.5.0/src/dlib-19.22/docs/rbf_normal.gif ViennaRNA-2.5.0/src/dlib-19.22/docs/config_reader_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/image_gradient_yy.jpg ViennaRNA-2.5.0/src/dlib-19.22/docs/image_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/krls_filter_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/api.html ViennaRNA-2.5.0/src/dlib-19.22/docs/plus.gif ViennaRNA-2.5.0/src/dlib-19.22/docs/index.html ViennaRNA-2.5.0/src/dlib-19.22/docs/running_stats_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/down.gif ViennaRNA-2.5.0/src/dlib-19.22/docs/face_landmarking_example.png ViennaRNA-2.5.0/src/dlib-19.22/docs/kernel_1c.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib-icon-48.png ViennaRNA-2.5.0/src/dlib-19.22/docs/dnn_semantic_segmentation_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/server_iostream_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/svm_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/surf_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/svm_pegasos_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/krls_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/fhog_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/right.gif ViennaRNA-2.5.0/src/dlib-19.22/docs/rbf_big_gamma.gif ViennaRNA-2.5.0/src/dlib-19.22/docs/face_alignment.py.html ViennaRNA-2.5.0/src/dlib-19.22/docs/find_max_global_example.png ViennaRNA-2.5.0/src/dlib-19.22/docs/bayes_net_from_disk_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/face_landmark_detection.py.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib-logo-small.png ViennaRNA-2.5.0/src/dlib-19.22/docs/assignment_learning_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/imaging.html ViennaRNA-2.5.0/src/dlib-19.22/docs/graph_tools.html ViennaRNA-2.5.0/src/dlib-19.22/docs/face_jitter.py.html ViennaRNA-2.5.0/src/dlib-19.22/docs/image_gradient_x.jpg ViennaRNA-2.5.0/src/dlib-19.22/docs/svm_c_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dnn_metric_learning_on_images_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/svm_struct_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/svm_rank.py.html ViennaRNA-2.5.0/src/dlib-19.22/docs/network.html ViennaRNA-2.5.0/src/dlib-19.22/docs/model_selection_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib-icon.ico ViennaRNA-2.5.0/src/dlib-19.22/docs/change_log.html ViennaRNA-2.5.0/src/dlib-19.22/docs/pipe_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/gui_api_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dnn_mmod_dog_hipsterizer.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/xml_parser_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/file_to_code_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/kernel_1da.html ViennaRNA-2.5.0/src/dlib-19.22/docs/matrix_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/vs_mode_2.png ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib.js ViennaRNA-2.5.0/src/dlib-19.22/docs/jet.png ViennaRNA-2.5.0/src/dlib-19.22/docs/pipe_ex_2.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/compress_stream_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/sequence_labeler_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/old_release_notes.html ViennaRNA-2.5.0/src/dlib-19.22/docs/krr_regression_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/kernel_1a.html ViennaRNA-2.5.0/src/dlib-19.22/docs/kernel_3b.html ViennaRNA-2.5.0/src/dlib-19.22/docs/integrate_function_adapt_simp_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dlib-icon-30x32.png ViennaRNA-2.5.0/src/dlib-19.22/docs/sqlite_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dir_nav_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/sockstreambuf_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/sockets_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/images/ ViennaRNA-2.5.0/src/dlib-19.22/docs/images/extract_image_4points_crop.jpg ViennaRNA-2.5.0/src/dlib-19.22/docs/images/mbd_example_in.jpg ViennaRNA-2.5.0/src/dlib-19.22/docs/images/mbd_example_out.jpg ViennaRNA-2.5.0/src/dlib-19.22/docs/images/extract_image_4points_source.jpg ViennaRNA-2.5.0/src/dlib-19.22/docs/linear_algebra.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dnn_mmod_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/dnn_face_recognition_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/docs/howto_contribute.html ViennaRNA-2.5.0/src/dlib-19.22/docs/logger_ex.cpp.html ViennaRNA-2.5.0/src/dlib-19.22/tools/ ViennaRNA-2.5.0/src/dlib-19.22/tools/archive/ ViennaRNA-2.5.0/src/dlib-19.22/tools/archive/train_face_5point_model.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/archive/CMakeLists.txt ViennaRNA-2.5.0/src/dlib-19.22/tools/convert_dlib_nets_to_caffe/ ViennaRNA-2.5.0/src/dlib-19.22/tools/convert_dlib_nets_to_caffe/main.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/convert_dlib_nets_to_caffe/CMakeLists.txt ViennaRNA-2.5.0/src/dlib-19.22/tools/convert_dlib_nets_to_caffe/running_a_dlib_model_with_caffe_example.py ViennaRNA-2.5.0/src/dlib-19.22/tools/htmlify/ ViennaRNA-2.5.0/src/dlib-19.22/tools/htmlify/to_xml.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/htmlify/to_xml_example/ ViennaRNA-2.5.0/src/dlib-19.22/tools/htmlify/to_xml_example/bigplus.gif ViennaRNA-2.5.0/src/dlib-19.22/tools/htmlify/to_xml_example/stylesheet.xsl ViennaRNA-2.5.0/src/dlib-19.22/tools/htmlify/to_xml_example/example.xml ViennaRNA-2.5.0/src/dlib-19.22/tools/htmlify/to_xml_example/bigminus.gif ViennaRNA-2.5.0/src/dlib-19.22/tools/htmlify/to_xml_example/minus.gif ViennaRNA-2.5.0/src/dlib-19.22/tools/htmlify/to_xml_example/test.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/htmlify/to_xml_example/plus.gif ViennaRNA-2.5.0/src/dlib-19.22/tools/htmlify/to_xml_example/output.xml ViennaRNA-2.5.0/src/dlib-19.22/tools/htmlify/CMakeLists.txt ViennaRNA-2.5.0/src/dlib-19.22/tools/htmlify/to_xml.h ViennaRNA-2.5.0/src/dlib-19.22/tools/htmlify/htmlify.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/python/ ViennaRNA-2.5.0/src/dlib-19.22/tools/python/dlib/ ViennaRNA-2.5.0/src/dlib-19.22/tools/python/dlib/__init__.py.in ViennaRNA-2.5.0/src/dlib-19.22/tools/python/test/ ViennaRNA-2.5.0/src/dlib-19.22/tools/python/test/.gitignore ViennaRNA-2.5.0/src/dlib-19.22/tools/python/test/test_matrix.py ViennaRNA-2.5.0/src/dlib-19.22/tools/python/test/test_vector.py ViennaRNA-2.5.0/src/dlib-19.22/tools/python/test/utils.py ViennaRNA-2.5.0/src/dlib-19.22/tools/python/test/shape.pkl ViennaRNA-2.5.0/src/dlib-19.22/tools/python/test/test_chinese_whispers.py ViennaRNA-2.5.0/src/dlib-19.22/tools/python/test/test_svm_c_trainer.py ViennaRNA-2.5.0/src/dlib-19.22/tools/python/test/test_sparse_vector.py ViennaRNA-2.5.0/src/dlib-19.22/tools/python/test/test_range.py ViennaRNA-2.5.0/src/dlib-19.22/tools/python/test/test_face_chip.npy ViennaRNA-2.5.0/src/dlib-19.22/tools/python/test/test_array.py ViennaRNA-2.5.0/src/dlib-19.22/tools/python/test/test_rgb_pixel.py ViennaRNA-2.5.0/src/dlib-19.22/tools/python/test/test_numpy_returns.py ViennaRNA-2.5.0/src/dlib-19.22/tools/python/test/test_global_optimization.py ViennaRNA-2.5.0/src/dlib-19.22/tools/python/test/generate_numpy_returns_test_data.py ViennaRNA-2.5.0/src/dlib-19.22/tools/python/test/test_point.py ViennaRNA-2.5.0/src/dlib-19.22/tools/python/CMakeLists.txt ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/ ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/indexing.h ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/face_recognition.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/cnn_face_detector.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/correlation_tracker.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/cca.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/image2.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/line.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/image3.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/global_optimization.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/shape_predictor.h ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/other.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/image.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/conversion.h ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/numpy_returns.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/decision_functions.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/sequence_segmenter.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/svm_struct.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/simple_object_detector.h ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/image4.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/shape_predictor.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/object_detection.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/svm_c_trainer.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/dlib.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/rectangles.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/serialize_object_detector.h ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/matrix.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/svm_rank_trainer.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/vector.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/basic.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/opaque_types.h ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/gui.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/simple_object_detector_py.h ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/image_dataset_metadata.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/python/src/testing_results.h ViennaRNA-2.5.0/src/dlib-19.22/tools/visual_studio_natvis/ ViennaRNA-2.5.0/src/dlib-19.22/tools/visual_studio_natvis/dlib.natvis ViennaRNA-2.5.0/src/dlib-19.22/tools/visual_studio_natvis/README.txt ViennaRNA-2.5.0/src/dlib-19.22/tools/imglab/ ViennaRNA-2.5.0/src/dlib-19.22/tools/imglab/convert_imglab_paths_to_relative ViennaRNA-2.5.0/src/dlib-19.22/tools/imglab/CMakeLists.txt ViennaRNA-2.5.0/src/dlib-19.22/tools/imglab/README.txt ViennaRNA-2.5.0/src/dlib-19.22/tools/imglab/copy_imglab_dataset ViennaRNA-2.5.0/src/dlib-19.22/tools/imglab/src/ ViennaRNA-2.5.0/src/dlib-19.22/tools/imglab/src/metadata_editor.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/imglab/src/flip_dataset.h ViennaRNA-2.5.0/src/dlib-19.22/tools/imglab/src/common.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/imglab/src/main.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/imglab/src/convert_pascal_v1.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/imglab/src/flip_dataset.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/imglab/src/convert_pascal_xml.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/imglab/src/metadata_editor.h ViennaRNA-2.5.0/src/dlib-19.22/tools/imglab/src/convert_idl.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/imglab/src/convert_pascal_xml.h ViennaRNA-2.5.0/src/dlib-19.22/tools/imglab/src/convert_pascal_v1.h ViennaRNA-2.5.0/src/dlib-19.22/tools/imglab/src/cluster.cpp ViennaRNA-2.5.0/src/dlib-19.22/tools/imglab/src/cluster.h ViennaRNA-2.5.0/src/dlib-19.22/tools/imglab/src/common.h ViennaRNA-2.5.0/src/dlib-19.22/tools/imglab/src/convert_idl.h ViennaRNA-2.5.0/src/dlib-19.22/README.md ViennaRNA-2.5.0/src/dlib-19.22/MANIFEST.in ViennaRNA-2.5.0/src/dlib-19.22/setup.py ViennaRNA-2.5.0/src/Cluster/ ViennaRNA-2.5.0/src/Cluster/AS_main.c ViennaRNA-2.5.0/src/Cluster/Makefile.am ViennaRNA-2.5.0/src/Cluster/statgeom.h ViennaRNA-2.5.0/src/Cluster/distance_matrix.c ViennaRNA-2.5.0/src/Cluster/PS3D.c ViennaRNA-2.5.0/src/Cluster/treeplot.c ViennaRNA-2.5.0/src/Cluster/split.c ViennaRNA-2.5.0/src/Cluster/Makefile.in ViennaRNA-2.5.0/src/Cluster/split.h ViennaRNA-2.5.0/src/Cluster/StrEdit_CostMatrix.h ViennaRNA-2.5.0/src/Cluster/AD_main.c ViennaRNA-2.5.0/src/Cluster/statgeom.c ViennaRNA-2.5.0/src/Cluster/distance_matrix.h ViennaRNA-2.5.0/src/Cluster/AnalyseDists.1 ViennaRNA-2.5.0/src/Cluster/cluster.h ViennaRNA-2.5.0/src/Cluster/treeplot.h ViennaRNA-2.5.0/src/Cluster/PS3D.h ViennaRNA-2.5.0/src/Cluster/cluster.c ViennaRNA-2.5.0/src/Cluster/AnalyseSeqs.1 ViennaRNA-2.5.0/interfaces/ ViennaRNA-2.5.0/interfaces/Makefile.am ViennaRNA-2.5.0/interfaces/RNA.i ViennaRNA-2.5.0/interfaces/combinatorics.dox ViennaRNA-2.5.0/interfaces/inverse.i ViennaRNA-2.5.0/interfaces/paths.i ViennaRNA-2.5.0/interfaces/file_formats.i ViennaRNA-2.5.0/interfaces/commands.i ViennaRNA-2.5.0/interfaces/neighbor.i ViennaRNA-2.5.0/interfaces/part_func.i ViennaRNA-2.5.0/interfaces/params.i ViennaRNA-2.5.0/interfaces/part_func.dox ViennaRNA-2.5.0/interfaces/Python/ ViennaRNA-2.5.0/interfaces/Python/Makefile.am ViennaRNA-2.5.0/interfaces/Python/globals-md.i ViennaRNA-2.5.0/interfaces/Python/callbacks-fc.i ViennaRNA-2.5.0/interfaces/Python/tmaps.i ViennaRNA-2.5.0/interfaces/Python/version.i ViennaRNA-2.5.0/interfaces/Python/file_py3.i ViennaRNA-2.5.0/interfaces/Python/callbacks-sc.i ViennaRNA-2.5.0/interfaces/Python/callbacks-ud.i ViennaRNA-2.5.0/interfaces/Python/version.i.in ViennaRNA-2.5.0/interfaces/Python/callbacks-pf-window.i ViennaRNA-2.5.0/interfaces/Python/callbacks-subopt.i ViennaRNA-2.5.0/interfaces/Python/RNA.py ViennaRNA-2.5.0/interfaces/Python/Makefile.in ViennaRNA-2.5.0/interfaces/Python/callbacks-boltzmann-sampling.i ViennaRNA-2.5.0/interfaces/Python/callbacks-mfe-window.i ViennaRNA-2.5.0/interfaces/Python/RNA_wrap.cpp ViennaRNA-2.5.0/interfaces/Python/callbacks-melting.i ViennaRNA-2.5.0/interfaces/Perl/ ViennaRNA-2.5.0/interfaces/Perl/Makefile.am ViennaRNA-2.5.0/interfaces/Perl/globals-md.i ViennaRNA-2.5.0/interfaces/Perl/callbacks-fc.i ViennaRNA-2.5.0/interfaces/Perl/tmaps.i ViennaRNA-2.5.0/interfaces/Perl/version.i ViennaRNA-2.5.0/interfaces/Perl/callbacks-sc.i ViennaRNA-2.5.0/interfaces/Perl/callbacks-ud.i ViennaRNA-2.5.0/interfaces/Perl/version.i.in ViennaRNA-2.5.0/interfaces/Perl/callbacks-pf-window.i ViennaRNA-2.5.0/interfaces/Perl/callbacks-subopt.i ViennaRNA-2.5.0/interfaces/Perl/RNA.pod ViennaRNA-2.5.0/interfaces/Perl/Makefile.in ViennaRNA-2.5.0/interfaces/Perl/callbacks-boltzmann-sampling.i ViennaRNA-2.5.0/interfaces/Perl/callbacks-mfe-window.i ViennaRNA-2.5.0/interfaces/Perl/RNA.pm ViennaRNA-2.5.0/interfaces/Perl/RNA/ ViennaRNA-2.5.0/interfaces/Perl/RNA/Reliability.pm ViennaRNA-2.5.0/interfaces/Perl/RNA/t/ ViennaRNA-2.5.0/interfaces/Perl/RNA/t/Design.t ViennaRNA-2.5.0/interfaces/Perl/RNA/Params.pm ViennaRNA-2.5.0/interfaces/Perl/RNA/Benchmark.pm ViennaRNA-2.5.0/interfaces/Perl/RNA/Design.pm ViennaRNA-2.5.0/interfaces/Perl/RNA/Utils.pm ViennaRNA-2.5.0/interfaces/Perl/RNA/Files.pm ViennaRNA-2.5.0/interfaces/Perl/RNA_wrap.cpp ViennaRNA-2.5.0/interfaces/Perl/callbacks-melting.i ViennaRNA-2.5.0/interfaces/fold_compound.dox ViennaRNA-2.5.0/interfaces/constraints_hard.dox ViennaRNA-2.5.0/interfaces/constraints_soft.i ViennaRNA-2.5.0/interfaces/boltzmann_sampling.i ViennaRNA-2.5.0/interfaces/Python2/ ViennaRNA-2.5.0/interfaces/Python2/Makefile.am ViennaRNA-2.5.0/interfaces/Python2/globals-md.i ViennaRNA-2.5.0/interfaces/Python2/callbacks-fc.i ViennaRNA-2.5.0/interfaces/Python2/tmaps.i ViennaRNA-2.5.0/interfaces/Python2/version.i ViennaRNA-2.5.0/interfaces/Python2/callbacks-sc.i ViennaRNA-2.5.0/interfaces/Python2/callbacks-ud.i ViennaRNA-2.5.0/interfaces/Python2/version.i.in ViennaRNA-2.5.0/interfaces/Python2/callbacks-pf-window.i ViennaRNA-2.5.0/interfaces/Python2/callbacks-subopt.i ViennaRNA-2.5.0/interfaces/Python2/RNA.py ViennaRNA-2.5.0/interfaces/Python2/Makefile.in ViennaRNA-2.5.0/interfaces/Python2/callbacks-boltzmann-sampling.i ViennaRNA-2.5.0/interfaces/Python2/callbacks-mfe-window.i ViennaRNA-2.5.0/interfaces/Python2/RNA_wrap.cpp ViennaRNA-2.5.0/interfaces/Python2/callbacks-melting.i ViennaRNA-2.5.0/interfaces/compare.i ViennaRNA-2.5.0/interfaces/eval.i ViennaRNA-2.5.0/interfaces/mfe.i ViennaRNA-2.5.0/interfaces/model_details.i ViennaRNA-2.5.0/interfaces/structure_utils.i ViennaRNA-2.5.0/interfaces/fold_compound.i ViennaRNA-2.5.0/interfaces/subopt.dox ViennaRNA-2.5.0/interfaces/plotting.i ViennaRNA-2.5.0/interfaces/basic_algorithms.dox ViennaRNA-2.5.0/interfaces/sequence.i ViennaRNA-2.5.0/interfaces/constraints_SHAPE.dox ViennaRNA-2.5.0/interfaces/boltzmann_sampling.dox ViennaRNA-2.5.0/interfaces/constraints_ligand.i ViennaRNA-2.5.0/interfaces/Makefile.in ViennaRNA-2.5.0/interfaces/pf_window.i ViennaRNA-2.5.0/interfaces/constraints_soft.dox ViennaRNA-2.5.0/interfaces/aln_utils.i ViennaRNA-2.5.0/interfaces/subopt.i ViennaRNA-2.5.0/interfaces/basic_algorithms.i ViennaRNA-2.5.0/interfaces/duplex.i ViennaRNA-2.5.0/interfaces/data_structures.i ViennaRNA-2.5.0/interfaces/eval.dox ViennaRNA-2.5.0/interfaces/loops.i ViennaRNA-2.5.0/interfaces/constraints.i ViennaRNA-2.5.0/interfaces/sequence.dox ViennaRNA-2.5.0/interfaces/aln_utils.dox ViennaRNA-2.5.0/interfaces/model_details.dox ViennaRNA-2.5.0/interfaces/combinatorics.i ViennaRNA-2.5.0/interfaces/move.i ViennaRNA-2.5.0/interfaces/grammar.dox ViennaRNA-2.5.0/interfaces/neighbor.dox ViennaRNA-2.5.0/interfaces/constraints_hard.i ViennaRNA-2.5.0/interfaces/heat_capacity.dox ViennaRNA-2.5.0/interfaces/utils.i ViennaRNA-2.5.0/interfaces/commands.dox ViennaRNA-2.5.0/interfaces/ptr2array.i ViennaRNA-2.5.0/interfaces/mfe_window.i ViennaRNA-2.5.0/interfaces/plotting.dox ViennaRNA-2.5.0/interfaces/heat_capacity.i ViennaRNA-2.5.0/interfaces/params.dox ViennaRNA-2.5.0/interfaces/grammar.i ViennaRNA-2.5.0/interfaces/mfe.dox ViennaRNA-2.5.0/interfaces/constraints_ligand.dox ViennaRNA-2.5.0/interfaces/paths.dox ViennaRNA-2.5.0/interfaces/constraints_SHAPE.i ViennaRNA-2.5.0/interfaces/walk.dox ViennaRNA-2.5.0/interfaces/walk.i ViennaRNA-2.5.0/interfaces/generic.mk checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for wchar.h... yes checking for minix/config.h... no checking whether it is safe to define __EXTENSIONS__... yes checking whether _XOPEN_SOURCE should be defined... no checking whether make supports nested variables... yes checking for a BSD-compatible install... /usr/bin/ginstall -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports the include directive... yes (GNU style) checking whether UID '0' is supported by ustar format... yes checking whether GID '0' is supported by ustar format... yes checking how to create a ustar tar archive... gnutar checking dependency style of gcc... gcc3 checking if malloc debugging is wanted... no checking build system type... i586-slackware-linux-gnu checking host system type... i586-slackware-linux-gnu checking for g++... g++ checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking dependency style of g++... gcc3 checking how to run the C++ preprocessor... g++ -E checking for gcc... (cached) gcc checking whether the compiler supports GNU C... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to enable C11 features... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking how to run the C preprocessor... gcc -E checking for ar... ar checking the archiver (ar) interface... ar checking whether make sets $(MAKE)... (cached) yes checking for grep that handles long lines and -e... /usr/bin/grep checking for a sed that does not truncate output... /usr/bin/sed checking for gawk... (cached) gawk checking whether ln -s works... yes checking how to print strings... printf checking for a sed that does not truncate output... (cached) /usr/bin/sed checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking how to convert i586-slackware-linux-gnu file names to i586-slackware-linux-gnu format... func_convert_file_noop checking how to convert i586-slackware-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... dlltool checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... mt checking if mt is a manifest tool... no checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for exp in -lm... yes checking for egrep... (cached) /usr/bin/grep -E checking for _Bool... yes checking for stdbool.h that conforms to C99... yes checking for malloc.h... yes checking for float.h... yes checking for limits.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking for unistd.h... (cached) yes checking for math.h... yes checking for stdarg.h... yes checking for GNU libc compatible malloc... yes checking for GNU libc compatible realloc... yes checking for working strtod... yes checking for floor... yes checking for strdup... yes checking for strstr... yes checking for strchr... yes checking for strrchr... yes checking for strstr... (cached) yes checking for strtol... yes checking for strtoul... yes checking for pow... yes checking for rint... yes checking for sqrt... yes checking for erand48... yes checking for memset... yes checking for memmove... yes checking for erand48... (cached) yes checking for asprintf... yes checking for vasprintf... yes checking for an ANSI C-conforming const... yes checking for size_t... yes checking for inline... inline checking for pdflatex... /usr/bin/pdflatex checking for bibtex... /usr/bin/bibtex checking for makeindex... /usr/bin/makeindex checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for C compiler vendor... gnu checking for perl... /usr/bin/perl checking whether C compiler accepts -fno-strict-aliasing... yes checking whether C++ compiler accepts -fno-strict-aliasing... yes checking whether the linker accepts -fno-strict-aliasing... yes checking whether the C compiler allows unnamed unions of unnamed structs... yes checking whether the C++ compiler allows unnamed unions of unnamed structs... yes checking whether C compiler accepts -flto... yes checking whether C++ compiler accepts -flto... yes checking whether C compiler accepts -ffat-lto-objects... yes checking whether C++ compiler accepts -ffat-lto-objects... yes checking for gcc-ar... gcc-ar checking for gcc-ranlib... gcc-ranlib checking for gcc-nm... gcc-nm checking whether the linker supports Link time Optimization (LTO)... yes checking for ./src/libsvm-3.25/svm.cpp... yes checking for ./src/libsvm-3.25/svm.h... yes checking for ./src/json/json.c... yes checking for ./src/json/json.h... yes checking for cblas_dgemm in -lgslcblas... yes checking for gsl_blas_dgemm in -lgsl... yes checking for OpenMP flag of C compiler... -fopenmp checking for OpenMP flag of C++ compiler... -fopenmp checking whether gcc is Clang... no checking whether pthreads work with "-pthread" and "-lpthread"... yes checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE checking whether more special flags are required for pthreads... no checking for PTHREAD_PRIO_INHERIT... yes checking compiler support for AVX 512 instructions... yes checking compiler support for SSE 4.1 instructions... yes checking whether C compiler accepts -ftree-vectorize... yes checking for mpfr.h... yes checking whether we can compile programs with mpfr support... yes checking for ./interfaces/Makefile.am... yes checking for swig... /usr/bin/swig checking SWIG version... 4.0.2 checking for SWIG library... /usr/share/swig/4.0.2 checking for ./interfaces/Perl/Makefile.am... yes checking for /usr/bin/perl... (cached) /usr/bin/perl checking for Perl prefix... /usr checking for Perl siteprefix... /usr/local checking for Perl vendorprefix... /usr checking for Perl extension include path... /usr/lib/perl5/CORE checking for Perl extension target directory... /usr/local/lib/perl5 checking for architecture dependent Perl extension site target directory... /usr/local/lib/perl5 checking for architecture dependent Perl extension vendor target directory... /usr/lib/perl5/vendor_perl checking for architecture independent Perl extension site target directory... /usr/local/share/perl5 checking for architecture independent Perl extension vendor target directory... /usr/share/perl5/vendor_perl checking for Perl extensions C preprocessor flags... -D_REENTRANT -D_GNU_SOURCE -fwrapv -fno-strict-aliasing -pipe -fstack-protector-strong -I/usr/local/include checking for Perl extensions linker flags... -shared -O2 -march=i586 -mtune=i686 -L/usr/local/lib -fstack-protector-strong checking for Perl dynamic library extension... .so checking for ./interfaces/Python/Makefile.am... yes checking for python3... /usr/bin/python3 checking for Python3 include path... /usr/include/python3.9 checking for /usr/include/python3.9/Python.h... yes checking for Python3 ldflags... checking for Python3 extension linker... gcc -pthread -shared checking for directory to install Python3 scripts in... ${prefix}/lib/python3.9/site-packages checking for directory to install architecture dependent python3 things in... ${exec_prefix}/lib/python3.9/site-packages checking for Python3 module extension... .cpython-39-i386-linux-gnu.so checking for Python3 tag for cached compiled scripts... cpython-39 checking for Python3 extension of cached and optimized bytecode... cpython-39.opt-1.pyc checking for doxygen... /usr/bin/doxygen checking for dot... /usr/bin/dot checking for egrep... /usr/bin/egrep checking for perl... /usr/bin/perl checking for htlatex... /usr/bin/htlatex checking for LaTeX package(s) url color caption amssymb amsmath upquote verbatim keystroke fancyvrb hyperref graphics pgf xcolor... yes checking for LaTeX package(s) fancyhdr lastpage xcolor hyperref geometry... yes checking for CHECK... yes checking for diff... /usr/bin/diff checking for xxd... /usr/bin/xxd checking for gengetopt... no checking for help2man... /usr/bin/help2man checking whether g++ supports C++11 features with -std=c++11... yes checking for ./src/dlib-19.22/dlib/all/source.cpp... yes checking for ./src/Kinfold/Makefile.am... yes checking for ./src/RNAforester/Makefile.am... yes checking for ./src/Cluster/Makefile.am... yes checking for ./src/Kinwalker/Makefile.am... yes checking for ./src/RNAlocmin/Makefile.am... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating packaging/macosx/Makefile config.status: creating packaging/macosx/Distribution.xml config.status: creating packaging/macosx/resources/welcome.txt config.status: creating interfaces/Perl/Makefile config.status: creating interfaces/Perl/version.i config.status: creating interfaces/Python/Makefile config.status: creating interfaces/Python/version.i config.status: creating tests/Makefile config.status: creating tests/RNApath.py config.status: creating tests/RNAHelpers.pm config.status: creating tests/test-env.sh config.status: creating src/ViennaRNA/static/templates_postscript.h config.status: creating src/ViennaRNA/static/templates_svg.h config.status: creating src/ViennaRNA/static/energy_parameter_sets.h config.status: creating src/Cluster/Makefile config.status: creating src/ViennaRNA/vrna_config.h config.status: creating misc/Makefile config.status: creating interfaces/Makefile config.status: creating Makefile config.status: creating RNAlib2.pc config.status: creating src/Utils/Makefile config.status: creating src/bin/Makefile config.status: creating src/Makefile config.status: creating src/ViennaRNA/Makefile config.status: creating src/ViennaRNA/static/Makefile config.status: creating man/Makefile config.status: creating doc/Makefile config.status: creating doc/CLA/Makefile config.status: creating RNA-Tutorial/Makefile config.status: creating man/cmdlopt.sh config.status: creating examples/Makefile config.status: creating packaging/viennarna.spec config.status: creating packaging/PKGBUILD config.status: creating packaging/win_installer_archlinux_i686.nsi config.status: creating packaging/win_installer_archlinux_x86_64.nsi config.status: creating packaging/win_installer_fedora_i686.nsi config.status: creating packaging/win_installer_fedora_x86_64.nsi config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands === configuring in src/Kinfold (/usr/src/slapt-src/academic/ViennaRNA/ViennaRNA-2.5.0/src/Kinfold) configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr' '--libdir=/usr/lib' '--mandir=/usr/man' '--docdir=/usr/doc/ViennaRNA-2.5.0' '--build=i586-slackware-linux' '--with-python2=no' '--with-doc=no' '--with-cluster' '--with-kinwalker' '--with-forester' '--with-rnalocmin' '--with-perl' '--with-python' '--with-swig' '--enable-simd' '--enable-lto' '--enable-openmp' '--enable-pthreads' '--with-svm' '--with-gsl' '--with-json' 'build_alias=i586-slackware-linux' 'CFLAGS=-O2 -march=i586 -mtune=i686' 'CXXFLAGS=-O2 -march=i586 -mtune=i686' 'CC=gcc' 'CXX=g++' 'AR=gcc-ar' 'RANLIB=gcc-ranlib' 'NM=gcc-nm' 'VRNA_CFLAGS=-I$(top_srcdir)/../../src/ViennaRNA -I$(top_srcdir)/../../src' 'VRNA_LIBS=-fno-strict-aliasing -flto -L$(top_builddir)/../../src/ViennaRNA -lRNA -fopenmp -lgsl -lgslcblas -lpthread -lmpfr -lgmp -lstdc++' --cache-file=/dev/null --srcdir=. checking whether make supports nested variables... yes checking for a BSD-compatible install... /usr/bin/ginstall -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking if malloc debugging is wanted... no checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... gcc3 checking build system type... i586-slackware-linux-gnu checking host system type... i586-slackware-linux-gnu checking for strdup... yes checking for memset... yes checking for strchr... yes checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for VRNA... yes checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking for unistd.h... (cached) yes checking for exp in -lm... yes checking for an ANSI C-conforming const... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Example/Makefile config.status: creating Makefile config.status: creating config.h config.status: executing depfiles commands === configuring in src/RNAforester (/usr/src/slapt-src/academic/ViennaRNA/ViennaRNA-2.5.0/src/RNAforester) configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr' '--libdir=/usr/lib' '--mandir=/usr/man' '--docdir=/usr/doc/ViennaRNA-2.5.0' '--build=i586-slackware-linux' '--with-python2=no' '--with-doc=no' '--with-cluster' '--with-kinwalker' '--with-forester' '--with-rnalocmin' '--with-perl' '--with-python' '--with-swig' '--enable-simd' '--enable-lto' '--enable-openmp' '--enable-pthreads' '--with-svm' '--with-gsl' '--with-json' 'build_alias=i586-slackware-linux' 'CFLAGS=-O2 -march=i586 -mtune=i686' 'CXXFLAGS=-O2 -march=i586 -mtune=i686' 'CC=gcc' 'CXX=g++' 'AR=gcc-ar' 'RANLIB=gcc-ranlib' 'NM=gcc-nm' 'VRNA_CFLAGS=-I$(top_srcdir)/../../src/ViennaRNA -I$(top_srcdir)/../../src' 'VRNA_LIBS=-fno-strict-aliasing -flto -L$(top_builddir)/../../src/ViennaRNA -lRNA -fopenmp -lgsl -lgslcblas -lpthread -lmpfr -lgmp -lstdc++' --cache-file=/dev/null --srcdir=. checking whether make supports nested variables... yes checking for a BSD-compatible install... /usr/bin/ginstall -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking whether make supports the include directive... yes (GNU style) checking dependency style of g++... gcc3 checking for gcc... gcc checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking for flex... flex checking for lex output file root... lex.yy checking for lex library... none needed checking for library containing yywrap... no checking for bison... bison -y checking for g++ option to support OpenMP... -fopenmp checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for VRNA... yes checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for g2.h... yes checking for an ANSI C-conforming const... yes checking for inline... inline checking for size_t... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating man/Makefile config.status: creating config.h config.status: executing depfiles commands === configuring in g2-0.72 (/usr/src/slapt-src/academic/ViennaRNA/ViennaRNA-2.5.0/src/RNAforester/g2-0.72) configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr' '--libdir=/usr/lib' '--mandir=/usr/man' '--docdir=/usr/doc/ViennaRNA-2.5.0' '--build=i586-slackware-linux' '--with-python2=no' '--with-doc=no' '--with-cluster' '--with-kinwalker' '--with-forester' '--with-rnalocmin' '--with-perl' '--with-python' '--with-swig' '--enable-simd' '--enable-lto' '--enable-openmp' '--enable-pthreads' '--with-svm' '--with-gsl' '--with-json' 'build_alias=i586-slackware-linux' 'CFLAGS=-O2 -march=i586 -mtune=i686' 'CXXFLAGS=-O2 -march=i586 -mtune=i686' 'CC=gcc' 'CXX=g++' 'AR=gcc-ar' 'RANLIB=gcc-ranlib' 'NM=gcc-nm' 'VRNA_CFLAGS=-I$(top_srcdir)/../../src/ViennaRNA -I$(top_srcdir)/../../src' 'VRNA_LIBS=-fno-strict-aliasing -flto -L$(top_builddir)/../../src/ViennaRNA -lRNA -fopenmp -lgsl -lgslcblas -lpthread -lmpfr -lgmp -lstdc++' --cache-file=/dev/null --srcdir=. checking build system type... i586-slackware-linux-gnu checking host system type... i586-slackware-linux-gnu checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking how to run the C preprocessor... gcc -E checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking for a BSD-compatible install... /usr/bin/ginstall -c checking for find... find checking for makedepend... makedepend checking for dlopen in -ldl... yes checking for X... libraries , headers checking for gethostbyname... yes checking for connect... yes checking for remove... yes checking for shmat... yes checking for IceConnectionNumber in -lICE... yes checking for main in -lm... yes checking for main in -lX11... yes checking for main in -lXext... yes checking for main in -lgd... yes checking for gdImagePng... yes checking for gdImageGif... yes checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for limits.h... yes configure: creating ./config.status config.status: creating Makefile config.status: creating demo/Makefile config.status: creating g2_perl/Makefile.PL config.status: creating g2_python/Makefile Supported devices: PostScript FIG X11 Xdbe GD GD (GIF) Unsupported devices: Win32 Run 'make depend' to create dependencies. === configuring in src/Kinwalker (/usr/src/slapt-src/academic/ViennaRNA/ViennaRNA-2.5.0/src/Kinwalker) configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr' '--libdir=/usr/lib' '--mandir=/usr/man' '--docdir=/usr/doc/ViennaRNA-2.5.0' '--build=i586-slackware-linux' '--with-python2=no' '--with-doc=no' '--with-cluster' '--with-kinwalker' '--with-forester' '--with-rnalocmin' '--with-perl' '--with-python' '--with-swig' '--enable-simd' '--enable-lto' '--enable-openmp' '--enable-pthreads' '--with-svm' '--with-gsl' '--with-json' 'build_alias=i586-slackware-linux' 'CFLAGS=-O2 -march=i586 -mtune=i686' 'CXXFLAGS=-O2 -march=i586 -mtune=i686' 'CC=gcc' 'CXX=g++' 'AR=gcc-ar' 'RANLIB=gcc-ranlib' 'NM=gcc-nm' 'VRNA_CFLAGS=-I$(top_srcdir)/../../src/ViennaRNA -I$(top_srcdir)/../../src' 'VRNA_LIBS=-fno-strict-aliasing -flto -L$(top_builddir)/../../src/ViennaRNA -lRNA -fopenmp -lgsl -lgslcblas -lpthread -lmpfr -lgmp -lstdc++' --cache-file=/dev/null --srcdir=. checking whether make supports nested variables... yes checking for a BSD-compatible install... /usr/bin/ginstall -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking whether make supports the include directive... yes (GNU style) checking dependency style of g++... gcc3 checking for gcc... gcc checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for malloc.h... yes checking for strings.h... (cached) yes checking for unistd.h... (cached) yes checking for inline... inline checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for VRNA... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating man/Makefile config.status: creating config.h config.status: executing depfiles commands === configuring in src/RNAlocmin (/usr/src/slapt-src/academic/ViennaRNA/ViennaRNA-2.5.0/src/RNAlocmin) configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr' '--libdir=/usr/lib' '--mandir=/usr/man' '--docdir=/usr/doc/ViennaRNA-2.5.0' '--build=i586-slackware-linux' '--with-python2=no' '--with-doc=no' '--with-cluster' '--with-kinwalker' '--with-forester' '--with-rnalocmin' '--with-perl' '--with-python' '--with-swig' '--enable-simd' '--enable-lto' '--enable-openmp' '--enable-pthreads' '--with-svm' '--with-gsl' '--with-json' 'build_alias=i586-slackware-linux' 'CFLAGS=-O2 -march=i586 -mtune=i686' 'CXXFLAGS=-O2 -march=i586 -mtune=i686' 'CC=gcc' 'CXX=g++' 'AR=gcc-ar' 'RANLIB=gcc-ranlib' 'NM=gcc-nm' 'VRNA_CFLAGS=-I$(top_srcdir)/../../src/ViennaRNA -I$(top_srcdir)/../../src' 'VRNA_LIBS=-fno-strict-aliasing -flto -L$(top_builddir)/../../src/ViennaRNA -lRNA -fopenmp -lgsl -lgslcblas -lpthread -lmpfr -lgmp -lstdc++' --cache-file=/dev/null --srcdir=. checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for wchar.h... yes checking for minix/config.h... no checking whether it is safe to define __EXTENSIONS__... yes checking whether _XOPEN_SOURCE should be defined... no checking whether make supports nested variables... yes checking for a BSD-compatible install... /usr/bin/ginstall -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... gcc3 checking build system type... i586-slackware-linux-gnu checking host system type... i586-slackware-linux-gnu checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking dependency style of g++... gcc3 checking how to run the C++ preprocessor... g++ -E checking for gcc... (cached) gcc checking whether the compiler supports GNU C... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to enable C11 features... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking how to run the C preprocessor... gcc -E checking whether g++ supports C++11 features by default... yes checking for strchr... yes checking for strdup... yes checking for strtol... yes checking for limits.h... yes checking for _Bool... yes checking for stdbool.h that conforms to C99... yes checking for inline... inline checking for GNU libc compatible malloc... yes checking for GNU libc compatible realloc... yes checking for working strtod... yes checking for size_t... yes checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for VRNA... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config.h config.status: executing depfiles commands configure: ====================================== ViennaRNA Package 2.5.0 ====================================== Successfully configured with the following options: Sub Packages ------------ * Kinfold : yes * RNAforester : yes * Analyse{Dists,Seqs} : yes * RNAlocmin : yes * Kinwalker : yes Extra Libraries --------------- * Support Vector Machine : yes * GNU Scientific Library : yes * GNU MPFR : yes * JSON : yes Features -------- * Use hash for NR Sampling : no * C11 features : yes * TTY colors : yes * Float Precision(PF} : no * Deprecation Warnings : no Optimizations ------------- * Auto Vectorization : yes * Explicit SIMD Extension : yes * Link Time Optimization : yes * POSIX Threads : yes * OpenMP : yes Scripting Language Interfaces ----------------------------- * Perl 5 : yes * Python 3.x : yes * Python 2.x : no Documentation ------------- * Reference Manual (PDF) : no * Reference Manual (HTML) : no * Tutorial (PDF) : yes * Tutorial (HTML) : no * CLA (PDF) : yes Unit Tests ---------- * Executable Programs : yes * C-Library : yes * Perl 5 Interface : yes * Python 3.x Interface : yes * Python 2.x Interface : no MacOS X ------- * Universal Binary : no * Installer : no * SDK : custom Install Directories ------------------- * Executables : /usr/bin * Libraries : /usr/lib * Header files : /usr/include * Extra Data : /usr/share * Man pages : /usr/man * Documentation : Not to be installed (HTML) : (PDF) : * Perl5 Interface : (binaries) : /usr/lib/perl5 (scripts) : /usr/share/perl5 * Python 3.x Interface : (binaries) : /usr/lib/python3.9/site-packages (scripts) : /usr/lib/python3.9/site-packages * Python 2.x Interface : Not to be installed (binaries) : (scripts) : You can run 'make', 'make check', and 'make install' now! make all-recursive make[1]: Entering directory '/usr/src/slapt-src/academic/ViennaRNA/ViennaRNA-2.5.0' Making all in src make[2]: Entering directory '/usr/src/slapt-src/academic/ViennaRNA/ViennaRNA-2.5.0/src' Making all in ViennaRNA make[3]: Entering directory '/usr/src/slapt-src/academic/ViennaRNA/ViennaRNA-2.5.0/src/ViennaRNA' Making all in static make[4]: Entering directory '/usr/src/slapt-src/academic/ViennaRNA/ViennaRNA-2.5.0/src/ViennaRNA/static' make all-am make[5]: Entering directory '/usr/src/slapt-src/academic/ViennaRNA/ViennaRNA-2.5.0/src/ViennaRNA/static' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/usr/src/slapt-src/academic/ViennaRNA/ViennaRNA-2.5.0/src/ViennaRNA/static' make[4]: Leaving directory '/usr/src/slapt-src/academic/ViennaRNA/ViennaRNA-2.5.0/src/ViennaRNA/static' make[4]: Entering directory '/usr/src/slapt-src/academic/ViennaRNA/ViennaRNA-2.5.0/src/ViennaRNA' CC fold_compound.lo CC dist_vars.lo CC part_func.lo CC part_func_wrappers.lo CC pf_fold.lo CC pf_multifold.lo CC treedist.lo CC inverse.lo CC ProfileDist.lo CC RNAstruct.lo CC mfe.lo CC mfe_window.lo CC mfe_wrappers.lo CC mfe_window_wrappers.lo CC fold.lo CC stringdist.lo CC subopt.lo CC subopt_zuker.lo CC Lfold.lo CC cofold.lo CC part_func_co.lo CC ProfileAln.lo CC duplex.lo CC alifold.lo CC alipfold.lo CC LPfold.lo CC part_func_up.lo CC ribo.lo CC MEA.lo CC mm.lo CC 2Dfold.lo CC 2Dpfold.lo CC plex_functions.lo CC ali_plex.lo CC c_plex.lo CC plex.lo CC snofold.lo CC snoop.lo CC gquad.lo CC perturbation_fold.lo CC centroid.lo CC model.lo CC dp_matrices.lo CC boltzmann_sampling.lo CC bs_wrappers.lo CC equilibrium_probs.lo CXX ../libsvm-3.25/svm.lo CC ../json/json.lo CC alphabet.lo CC sequence.lo CC unstructured_domains.lo CC grammar.lo CC heat_capacity.lo CC zscore.lo CC libRNA_concentrations_la-concentrations.lo CXX ../dlib-19.22/dlib/all/libRNA_concentrations_la-source.lo In file included from ../dlib-19.22/dlib/all/../cuda/../matrix.h:11, from ../dlib-19.22/dlib/all/../cuda/tensor.h:8, from ../dlib-19.22/dlib/all/../cuda/cpu_dlib.h:9, from ../dlib-19.22/dlib/all/../cuda/cpu_dlib.cpp:8, from ../dlib-19.22/dlib/all/source.cpp:82: ../dlib-19.22/dlib/all/../filtering/kalman_filter.cpp: In function ‘dlib::svd4, dlib::row_major_layout> > > > >, 1l, 1l, 1l, 1l, 2l, 1l, dlib::memory_manager_stateless_kernel_1, dlib::memory_manager_stateless_kernel_1, dlib::memory_manager_stateless_kernel_1, dlib::row_major_layout>(dlib::svd_u_mode, bool, dlib::matrix_exp, dlib::row_major_layout> > > > > > const&, dlib::matrix, dlib::row_major_layout> > > > >::type, 1l, 1l, dlib::memory_manager_stateless_kernel_1, dlib::row_major_layout>&, dlib::matrix, dlib::row_major_layout> > > > >::type, 1l, 1l, dlib::memory_manager_stateless_kernel_1, dlib::row_major_layout>&, dlib::matrix, dlib::row_major_layout> > > > >::type, 2l, 1l, dlib::memory_manager_stateless_kernel_1, dlib::row_major_layout>&)long’: ../dlib-19.22/dlib/all/../cuda/../matrix/matrix_la.h:225:32: warning: iteration 1 invokes undefined behavior [-Waggressive-loop-optimizations] 225 | y = abs(q(i)) + abs(e(i)); | ~~~^~~~~~ ../dlib-19.22/dlib/all/../cuda/../matrix/matrix_la.h:163:20: note: within this loop 163 | for (i=0; i