warning: no files found matching 'bin/_preamble.py'
./
install/
install/slack-desc
usr/
usr/bin/
usr/bin/cutadapt
usr/doc/
usr/doc/cutadapt-1.14/
usr/doc/cutadapt-1.14/CHANGES.rst
usr/doc/cutadapt-1.14/CITATION
usr/doc/cutadapt-1.14/LICENSE
usr/doc/cutadapt-1.14/README.rst
usr/doc/cutadapt-1.14/cutadapt.SlackBuild
usr/lib/
usr/lib/python2.7/
usr/lib/python2.7/site-packages/
usr/lib/python2.7/site-packages/cutadapt/
usr/lib/python2.7/site-packages/cutadapt-1.14-py2.7.egg-info/
usr/lib/python2.7/site-packages/cutadapt-1.14-py2.7.egg-info/PKG-INFO
usr/lib/python2.7/site-packages/cutadapt-1.14-py2.7.egg-info/SOURCES.txt
usr/lib/python2.7/site-packages/cutadapt-1.14-py2.7.egg-info/dependency_links.txt
usr/lib/python2.7/site-packages/cutadapt-1.14-py2.7.egg-info/entry_points.txt
usr/lib/python2.7/site-packages/cutadapt-1.14-py2.7.egg-info/requires.txt
usr/lib/python2.7/site-packages/cutadapt-1.14-py2.7.egg-info/top_level.txt
usr/lib/python2.7/site-packages/cutadapt/__init__.py
usr/lib/python2.7/site-packages/cutadapt/__init__.pyc
usr/lib/python2.7/site-packages/cutadapt/_align.so
usr/lib/python2.7/site-packages/cutadapt/_qualtrim.so
usr/lib/python2.7/site-packages/cutadapt/_seqio.so
usr/lib/python2.7/site-packages/cutadapt/_version.py
usr/lib/python2.7/site-packages/cutadapt/_version.pyc
usr/lib/python2.7/site-packages/cutadapt/adapters.py
usr/lib/python2.7/site-packages/cutadapt/adapters.pyc
usr/lib/python2.7/site-packages/cutadapt/align.py
usr/lib/python2.7/site-packages/cutadapt/align.pyc
usr/lib/python2.7/site-packages/cutadapt/colorspace.py
usr/lib/python2.7/site-packages/cutadapt/colorspace.pyc
usr/lib/python2.7/site-packages/cutadapt/compat.py
usr/lib/python2.7/site-packages/cutadapt/compat.pyc
usr/lib/python2.7/site-packages/cutadapt/filters.py
usr/lib/python2.7/site-packages/cutadapt/filters.pyc
usr/lib/python2.7/site-packages/cutadapt/modifiers.py
usr/lib/python2.7/site-packages/cutadapt/modifiers.pyc
usr/lib/python2.7/site-packages/cutadapt/qualtrim.py
usr/lib/python2.7/site-packages/cutadapt/qualtrim.pyc
usr/lib/python2.7/site-packages/cutadapt/report.py
usr/lib/python2.7/site-packages/cutadapt/report.pyc
usr/lib/python2.7/site-packages/cutadapt/scripts/
usr/lib/python2.7/site-packages/cutadapt/scripts/__init__.py
usr/lib/python2.7/site-packages/cutadapt/scripts/__init__.pyc
usr/lib/python2.7/site-packages/cutadapt/scripts/cutadapt.py
usr/lib/python2.7/site-packages/cutadapt/scripts/cutadapt.pyc
usr/lib/python2.7/site-packages/cutadapt/seqio.py
usr/lib/python2.7/site-packages/cutadapt/seqio.pyc
tq
cutadapt-1.14/tests/cut/paired-trimmed.2.fastq
cutadapt-1.14/tests/cut/no_indels.fasta
cutadapt-1.14/tests/cut/pairedu.2.fastq
cutadapt-1.14/tests/cut/linked.fasta
cutadapt-1.14/tests/cut/pairedq.2.fastq
cutadapt-1.14/tests/cut/sra.fastq
cutadapt-1.14/tests/cut/paired.2.fastq
cutadapt-1.14/tests/cut/illumina.info.txt
cutadapt-1.14/tests/cut/twoadapters.unknown.fasta
cutadapt-1.14/tests/cut/empty.fastq
cutadapt-1.14/tests/cut/minlen.fa
cutadapt-1.14/tests/cut/interleaved.fastq
cutadapt-1.14/tests/cut/illumina.fastq
cutadapt-1.14/tests/cut/paired-untrimmed.1.fastq
cutadapt-1.14/tests/cut/paired-trimmed.1.fastq
cutadapt-1.14/tests/cut/plus.fastq
cutadapt-1.14/tests/cut/solid5p.fasta
cutadapt-1.14/tests/cut/overlapb.fa
cutadapt-1.14/tests/cut/stripped.fasta
cutadapt-1.14/tests/cut/maxn0.fasta
cutadapt-1.14/tests/cut/maxn2.fasta
cutadapt-1.14/tests/cut/illumina5.fastq
cutadapt-1.14/tests/cut/wildcard.fa
cutadapt-1.14/tests/cut/s_1_sequence.txt
cutadapt-1.14/tests/cut/polya.fasta
cutadapt-1.14/tests/cut/small.untrimmed.fastq
cutadapt-1.14/tests/cut/examplefront.fa
cutadapt-1.14/tests/cut/solidbfast.fastq
cutadapt-1.14/tests/cut/anchored_no_indels.fasta
cutadapt-1.14/tests/cut/shortened.fastq
cutadapt-1.14/tests/cut/small-no-trim.fasta
cutadapt-1.14/tests/cut/trimN3.fasta
cutadapt-1.14/tests/cut/solid-no-zerocap.fastq
cutadapt-1.14/tests/cut/solid5p-anchored.fastq
cutadapt-1.14/tests/cut/solid5p-anchored.notrim.fastq
cutadapt-1.14/tests/cut/454.fa
cutadapt-1.14/tests/cut/paired-m27.1.fastq
cutadapt-1.14/tests/cut/paired-separate.2.fastq
cutadapt-1.14/tests/cut/solid5p-anchored.fasta
cutadapt-1.14/tests/cut/paired-too-short.2.fastq
cutadapt-1.14/tests/cut/wildcardN.fa
cutadapt-1.14/tests/cut/issue46.fasta
cutadapt-1.14/tests/cut/linked-not-anchored.fasta
cutadapt-1.14/tests/cut/twoadapters.fasta
cutadapt-1.14/tests/cut/unconditional-back.fastq
cutadapt-1.14/tests/cut/paired-onlyA.2.fastq
cutadapt-1.14/tests/cut/small.fastq
cutadapt-1.14/tests/cut/twoadapters.second.fasta
cutadapt-1.14/tests/cut/anchored.fasta
cutadapt-1.14/tests/testqualtrim.py
cutadapt-1.14/tests/testtrim.py
cutadapt-1.14/tests/utils.py
cutadapt-1.14/tests/testseqio.py
cutadapt-1.14/tests/testcolorspace.py
cutadapt-1.14/tests/tests.py
cutadapt-1.14/tests/testmodifiers.py
cutadapt-1.14/tests/testfilters.py
cutadapt-1.14/tests/testpaired.py
cutadapt-1.14/tests/testalign.py
cutadapt-1.14/tests/data/
cutadapt-1.14/tests/data/paired.1.fastq
cutadapt-1.14/tests/data/small.fastq.xz
cutadapt-1.14/tests/data/rest.fa
cutadapt-1.14/tests/data/solid.fastq
cutadapt-1.14/tests/data/lowqual.fastq
cutadapt-1.14/tests/data/nextseq.fastq
cutadapt-1.14/tests/data/trimN5.fasta
cutadapt-1.14/tests/data/toolong.fa
cutadapt-1.14/tests/data/adapter.fasta
cutadapt-1.14/tests/data/solid5p.fastq
cutadapt-1.14/tests/data/solid.csfasta
cutadapt-1.14/tests/data/anchored-back.fasta
cutadapt-1.14/tests/data/overlapa.fa
cutadapt-1.14/tests/data/restfront.txt
cutadapt-1.14/tests/data/example.fa
cutadapt-1.14/tests/data/solid.fasta
cutadapt-1.14/tests/data/anywhere_repeat.fastq
cutadapt-1.14/tests/data/tooshort.fa
cutadapt-1.14/tests/data/wildcard_adapter.fa
cutadapt-1.14/tests/data/multiblock.fastq.bz2
cutadapt-1.14/tests/data/SRR2040271_1.fastq
cutadapt-1.14/tests/data/rest.txt
cutadapt-1.14/tests/data/illumina64.fastq
cutadapt-1.14/tests/data/dos.fastq
cutadapt-1.14/tests/data/no_indels.fasta
cutadapt-1.14/tests/data/small.myownextension
cutadapt-1.14/tests/data/linked.fasta
cutadapt-1.14/tests/data/sra.fastq
cutadapt-1.14/tests/data/small.fastq.bz2
cutadapt-1.14/tests/data/withplus.fastq
cutadapt-1.14/tests/data/paired.2.fastq
cutadapt-1.14/tests/data/tooshort.noprimer.fa
cutadapt-1.14/tests/data/simple.fasta
cutadapt-1.14/tests/data/empty.fastq
cutadapt-1.14/tests/data/small.fastq.gz
cutadapt-1.14/tests/data/suffix-adapter.fasta
cutadapt-1.14/tests/data/interleaved.fastq
cutadapt-1.14/tests/data/lengths.fa
cutadapt-1.14/tests/data/prefix-adapter.fasta
cutadapt-1.14/tests/data/plus.fastq
cutadapt-1.14/tests/data/solid5p.fasta
cutadapt-1.14/tests/data/simple.fastq
cutadapt-1.14/tests/data/overlapb.fa
cutadapt-1.14/tests/data/illumina5.fastq
cutadapt-1.14/tests/data/E3M.qual
cutadapt-1.14/tests/data/wildcard.fa
cutadapt-1.14/tests/data/polya.fasta
cutadapt-1.14/tests/data/illumina.fastq.gz
cutadapt-1.14/tests/data/anchored_no_indels.fasta
cutadapt-1.14/tests/data/solid.qual
cutadapt-1.14/tests/data/trimN3.fasta
cutadapt-1.14/tests/data/454.fa
cutadapt-1.14/tests/data/E3M.fasta
cutadapt-1.14/tests/data/multiblock.fastq.gz
cutadapt-1.14/tests/data/maxn.fasta
cutadapt-1.14/tests/data/s_1_sequence.txt.gz
cutadapt-1.14/tests/data/wildcardN.fa
cutadapt-1.14/tests/data/issue46.fasta
cutadapt-1.14/tests/data/twoadapters.fasta
cutadapt-1.14/tests/data/small.fastq
cutadapt-1.14/tests/data/anchored.fasta
cutadapt-1.14/tests/testadapters.py
cutadapt-1.14/versioneer.py
cutadapt-1.14/setup.cfg
cutadapt-1.14/CITATION
cutadapt-1.14/MANIFEST.in
cutadapt-1.14/README.rst
cutadapt-1.14/doc/
cutadapt-1.14/doc/colorspace.rst
cutadapt-1.14/doc/Makefile
cutadapt-1.14/doc/recipes.rst
cutadapt-1.14/doc/index.rst
cutadapt-1.14/doc/develop.rst
cutadapt-1.14/doc/conf.py
cutadapt-1.14/doc/changes.rst
cutadapt-1.14/doc/guide.rst
cutadapt-1.14/doc/ideas.rst
cutadapt-1.14/doc/installation.rst
cutadapt-1.14/cutadapt/
cutadapt-1.14/cutadapt/_seqio.pyx
cutadapt-1.14/cutadapt/align.py
cutadapt-1.14/cutadapt/compat.py
cutadapt-1.14/cutadapt/_qualtrim.c
cutadapt-1.14/cutadapt/seqio.py
cutadapt-1.14/cutadapt/_align.c
cutadapt-1.14/cutadapt/__init__.py
cutadapt-1.14/cutadapt/_qualtrim.pyx
cutadapt-1.14/cutadapt/filters.py
cutadapt-1.14/cutadapt/_version.py
cutadapt-1.14/cutadapt/_seqio.c
cutadapt-1.14/cutadapt/colorspace.py
cutadapt-1.14/cutadapt/_align.pyx
cutadapt-1.14/cutadapt/scripts/
cutadapt-1.14/cutadapt/scripts/__init__.py
cutadapt-1.14/cutadapt/scripts/cutadapt.py
cutadapt-1.14/cutadapt/qualtrim.py
cutadapt-1.14/cutadapt/report.py
cutadapt-1.14/cutadapt/adapters.py
cutadapt-1.14/cutadapt/modifiers.py
cutadapt-1.14/cutadapt.egg-info/
cutadapt-1.14/cutadapt.egg-info/PKG-INFO
cutadapt-1.14/cutadapt.egg-info/entry_points.txt
cutadapt-1.14/cutadapt.egg-info/dependency_links.txt
cutadapt-1.14/cutadapt.egg-info/SOURCES.txt
cutadapt-1.14/cutadapt.egg-info/top_level.txt
cutadapt-1.14/cutadapt.egg-info/requires.txt
cutadapt-1.14/CHANGES.rst
cutadapt-1.14/setup.py
cutadapt-1.14/LICENSE
running install
running build
running build_py
creating build
creating build/lib.linux-i686-2.7
creating build/lib.linux-i686-2.7/cutadapt
copying cutadapt/align.py -> build/lib.linux-i686-2.7/cutadapt
copying cutadapt/compat.py -> build/lib.linux-i686-2.7/cutadapt
copying cutadapt/seqio.py -> build/lib.linux-i686-2.7/cutadapt
copying cutadapt/__init__.py -> build/lib.linux-i686-2.7/cutadapt
copying cutadapt/filters.py -> build/lib.linux-i686-2.7/cutadapt
copying cutadapt/_version.py -> build/lib.linux-i686-2.7/cutadapt
copying cutadapt/colorspace.py -> build/lib.linux-i686-2.7/cutadapt
copying cutadapt/qualtrim.py -> build/lib.linux-i686-2.7/cutadapt
copying cutadapt/report.py -> build/lib.linux-i686-2.7/cutadapt
copying cutadapt/adapters.py -> build/lib.linux-i686-2.7/cutadapt
copying cutadapt/modifiers.py -> build/lib.linux-i686-2.7/cutadapt
creating build/lib.linux-i686-2.7/cutadapt/scripts
copying cutadapt/scripts/__init__.py -> build/lib.linux-i686-2.7/cutadapt/scripts
copying cutadapt/scripts/cutadapt.py -> build/lib.linux-i686-2.7/cutadapt/scripts
UPDATING build/lib.linux-i686-2.7/cutadapt/_version.py
set build/lib.linux-i686-2.7/cutadapt/_version.py to '1.14'
running build_ext
building 'cutadapt._align' extension
creating build/temp.linux-i686-2.7
creating build/temp.linux-i686-2.7/cutadapt
gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I/usr/include/python2.7 -c cutadapt/_align.c -o build/temp.linux-i686-2.7/cutadapt/_align.o
gcc -pthread -shared build/temp.linux-i686-2.7/cutadapt/_align.o -L/usr/lib -lpython2.7 -o build/lib.linux-i686-2.7/cutadapt/_align.so
building 'cutadapt._qualtrim' extension
gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I/usr/include/python2.7 -c cutadapt/_qualtrim.c -o build/temp.linux-i686-2.7/cutadapt/_qualtrim.o
gcc -pthread -shared build/temp.linux-i686-2.7/cutadapt/_qualtrim.o -L/usr/lib -lpython2.7 -o build/lib.linux-i686-2.7/cutadapt/_qualtrim.so
building 'cutadapt._seqio' extension
gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I/usr/include/python2.7 -c cutadapt/_seqio.c -o build/temp.linux-i686-2.7/cutadapt/_seqio.o
gcc -pthread -shared build/temp.linux-i686-2.7/cutadapt/_seqio.o -L/usr/lib -lpython2.7 -o build/lib.linux-i686-2.7/cutadapt/_seqio.so
running install_lib
creating /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr
creating /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib
creating /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7
creating /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages
creating /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt
copying build/lib.linux-i686-2.7/cutadapt/align.py -> /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt
copying build/lib.linux-i686-2.7/cutadapt/compat.py -> /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt
copying build/lib.linux-i686-2.7/cutadapt/seqio.py -> /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt
copying build/lib.linux-i686-2.7/cutadapt/__init__.py -> /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt
copying build/lib.linux-i686-2.7/cutadapt/filters.py -> /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt
copying build/lib.linux-i686-2.7/cutadapt/colorspace.py -> /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt
copying build/lib.linux-i686-2.7/cutadapt/qualtrim.py -> /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt
copying build/lib.linux-i686-2.7/cutadapt/report.py -> /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt
copying build/lib.linux-i686-2.7/cutadapt/adapters.py -> /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt
copying build/lib.linux-i686-2.7/cutadapt/modifiers.py -> /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt
creating /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt/scripts
copying build/lib.linux-i686-2.7/cutadapt/scripts/__init__.py -> /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt/scripts
copying build/lib.linux-i686-2.7/cutadapt/scripts/cutadapt.py -> /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt/scripts
copying build/lib.linux-i686-2.7/cutadapt/_version.py -> /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt
copying build/lib.linux-i686-2.7/cutadapt/_align.so -> /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt
copying build/lib.linux-i686-2.7/cutadapt/_qualtrim.so -> /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt
copying build/lib.linux-i686-2.7/cutadapt/_seqio.so -> /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt
byte-compiling /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt/align.py to align.pyc
byte-compiling /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt/compat.py to compat.pyc
byte-compiling /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt/seqio.py to seqio.pyc
byte-compiling /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt/__init__.py to __init__.pyc
byte-compiling /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt/filters.py to filters.pyc
byte-compiling /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt/colorspace.py to colorspace.pyc
byte-compiling /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt/qualtrim.py to qualtrim.pyc
byte-compiling /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt/report.py to report.pyc
byte-compiling /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt/adapters.py to adapters.pyc
byte-compiling /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt/modifiers.py to modifiers.pyc
byte-compiling /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt/scripts/__init__.py to __init__.pyc
byte-compiling /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt/scripts/cutadapt.py to cutadapt.pyc
byte-compiling /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt/_version.py to _version.pyc
running install_egg_info
running egg_info
writing requirements to cutadapt.egg-info/requires.txt
writing cutadapt.egg-info/PKG-INFO
writing top-level names to cutadapt.egg-info/top_level.txt
writing dependency_links to cutadapt.egg-info/dependency_links.txt
writing entry points to cutadapt.egg-info/entry_points.txt
reading manifest file 'cutadapt.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file 'cutadapt.egg-info/SOURCES.txt'
Copying cutadapt.egg-info to /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/lib/python2.7/site-packages/cutadapt-1.14-py2.7.egg-info
running install_scripts
Installing cutadapt script to /usr/src/slapt-src/academic/cutadapt/package-cutadapt/usr/bin

Slackware package maker, version 3.14159265.

Searching for symbolic links:

No symbolic links were found, so we won't make an installation script.
You can make your own later in ./install/doinst.sh and rebuild the
package if you like.

This next step is optional - you can set the directories in your package
to some sane permissions. If any of the directories in your package have
special permissions, then DO NOT reset them here!

Would you like to reset all directory permissions to 755 (drwxr-xr-x) and
directory ownerships to root.root ([y]es, [n]o)? n

Creating Slackware package:  /usr/src/slapt-src/academic/cutadapt/cutadapt-1.14-i586-1salix15.0.txz

WARNING:  zero length file usr/lib/python2.7/site-packages/cutadapt/scripts/__init__.py

Slackware package /usr/src/slapt-src/academic/cutadapt/cutadapt-1.14-i586-1salix15.0.txz created.

Installing package cutadapt-1.14-i586-1salix15.0...
| cutadapt (Trim adapters from high-throughput sequencing reads)
| 
| Cutadapt finds and removes adapter sequences, primers, poly-A
| tails and other types of unwanted sequence from your high-
| throughput sequencing reads.
| 
| Home: https://pypi.python.org/pypi/cutadapt/
| References: /usr/doc/cutadapt-1.13/CITATION
| 
| 
| 
| 
|