The following packages will be installed: treebest-ensembl Fetching README... 0%100%100%100%100%100%Done Fetching doinst.sh... 0%100%100%100%100%100%Done Fetching slack-desc... 0%100%100%100%100%100%Done Fetching treebest-ensembl.SlackBuild... 0%100%100%100%100%100%Done Fetching treebest-ensembl.info... 0%100%100%100%100%100%Done Fetching treebest.desktop... 0%100%100%100%100%100%Done Fetching treebest.png... 0%100%100%100%100%100%Done treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/ treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/ACKNOWLEDGEMENTS treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/AUTHORS treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/COPYING treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/ChangeLog treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/FUTURES treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/INSTALL treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/Makefile treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/Makefile.mac 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treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/treebest.texi treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/trimpoor.cc treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/utils.h treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/utils1.c treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/utils2.c make[1]: Entering directory '/usr/src/slapt-src/academic/treebest-ensembl/treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290' flex parser.l bison --yacc -d parser.y gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer lex.yy.c -o lex.yy.o lex.yy.c:1191:16: warning: ‘input’ defined but not used [-Wunused-function] 1191 | #else | ^ lex.yy.c:1148:17: warning: ‘yyunput’ defined but not used [-Wunused-function] 1148 | | ^ ln -sf y.tab.c y.tab.cc g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer y.tab.cc -o y.tab.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. read.c -o read.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. nj.c -o nj.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. utils1.c -o utils1.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. subtree.c -o subtree.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. sdi.c -o sdi.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. bs_nj.c -o bs_nj.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. reroot.c -o reroot.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. task.c -o task.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. output.c -o output.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. ortho.c -o ortho.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. cut_tree.c -o cut_tree.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. spec.c -o spec.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. utils2.c -o utils2.o utils2.c: In function ‘tr_root_by_sdi’: utils2.c:162:13: warning: variable ‘m’ set but not used [-Wunused-but-set-variable] 162 | int m, i, min, min_i, min_dup; | ^ gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. align.c -o align.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. filter.c -o filter.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. aln_mask.c -o aln_mask.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. prob_dist.c -o prob_dist.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. brent.c -o brent.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. make_ng86.c -o make_ng86.o make_ng86.c: In function ‘calc_ds’: make_ng86.c:130:26: warning: variable ‘nd_total’ set but not used [-Wunused-but-set-variable] 130 | double sd_total, nd_total; | ^~~~~~~~ make_ng86.c:130:16: warning: variable ‘sd_total’ set but not used [-Wunused-but-set-variable] 130 | double sd_total, nd_total; | ^~~~~~~~ make_ng86.c:124:29: warning: unused parameter ‘length’ [-Wunused-parameter] 124 | struct dsresult calc_ds(int length, int seq_index_0, int seq_index_1) | ~~~~^~~~~~ make_ng86.c: In function ‘readcodon’: make_ng86.c:158:16: warning: variable ‘cvalue’ set but not used [-Wunused-but-set-variable] 158 | int k, cvalue; | ^~~~~~ gcc -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 make_ng86.o -o make_ng86 ./make_ng86 ng86_ds.h gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. ng86_ds.c -o ng86_ds.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. lost.c -o lost.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. tree_plot.c -o tree_plot.o g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. cpp_utils.cc -o cpp_utils.o g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. read_aln.cc -o read_aln.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. pre_cons.c -o pre_cons.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. simulate.c -o simulate.o g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. compare.cc -o compare.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. order.c -o order.o g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. nhx_output.cc -o nhx_output.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. nj2.c -o nj2.o g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. backtrans.cc -o backtrans.o backtrans.cc: In function ‘MultiAlign* ma_back_trans_core(MultiAlign*, hash_map_char*, double)’: backtrans.cc:56:74: warning: array subscript has type ‘char’ [-Wchar-subscripts] 56 | aln_aa[j] = aln_aa_rev_table[aa->seq[i][j]]; | ~~~~~~~~~~~~^ gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. phyml.c -o phyml.o g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. mmerge.cc -o mmerge.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. est_len.c -o est_len.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. best.c -o best.o g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. trimpoor.cc -o trimpoor.o ar -cru libphylotree.a lex.yy.o y.tab.o read.o nj.o utils1.o subtree.o sdi.o bs_nj.o reroot.o task.o output.o ortho.o cut_tree.o spec.o utils2.o align.o filter.o aln_mask.o prob_dist.o brent.o ng86_ds.o lost.o tree_plot.o cpp_utils.o read_aln.o pre_cons.o simulate.o compare.o order.o nhx_output.o nj2.o backtrans.o phyml.o mmerge.o est_len.o best.o trimpoor.o make[1]: Leaving directory '/usr/src/slapt-src/academic/treebest-ensembl/treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290' make[1]: Entering directory '/usr/src/slapt-src/academic/treebest-ensembl/treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/align_lib' gcc -c -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 aa2nt.c -o aa2nt.o -I. -I.. aa2nt.c: In function ‘aln_aa2nt_global_core’: aa2nt.c:216:49: warning: variable ‘band_width’ set but not used [-Wunused-but-set-variable] 216 | int gap_open, gap_ext, gap_end, gap_oe, band_width; | ^~~~~~~~~~ aa2nt.c:216:32: warning: variable ‘gap_end’ set but not used [-Wunused-but-set-variable] 216 | int gap_open, gap_ext, gap_end, gap_oe, band_width; | ^~~~~~~ aa2nt.c:210:20: warning: variable ‘mi’ set but not used [-Wunused-but-set-variable] 210 | int max_M, mi, mj; | ^~ gcc -c -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 aa2nt_local.c -o aa2nt_local.o -I. -I.. aa2nt_local.c: In function ‘aln_aa2nt_local_core’: aa2nt_local.c:146:32: warning: variable ‘gap_end’ set but not used [-Wunused-but-set-variable] 146 | int gap_open, gap_ext, gap_end, gap_oe; | ^~~~~~~ aa2nt_local.c: In function ‘aln_nt2aa’: aa2nt_local.c:207:13: warning: variable ‘score’ set but not used [-Wunused-but-set-variable] 207 | int score; | ^~~~~ aa2nt_local.c:233:19: warning: ‘*nt’ may be used uninitialized [-Wmaybe-uninitialized] 233 | utmp = (nt[0]<<2)|nt[1]; | ~~^~~ aa2nt_local.c:233:29: warning: ‘nt[1]’ may be used uninitialized [-Wmaybe-uninitialized] 233 | utmp = (nt[0]<<2)|nt[1]; | ~~^~~ gcc -c -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 transaln.c -o transaln.o -I. -I.. gcc -c -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 splice.c -o splice.o -I. -I.. splice.c: In function ‘aln_splice_global_core’: splice.c:162:40: warning: variable ‘good_splice’ set but not used [-Wunused-but-set-variable] 162 | int gap_open, gap_ext, gap_oe, good_splice, bad_splice, *sc_matrix; | ^~~~~~~~~~~ gcc -c -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 splice_local.c -o splice_local.o -I. -I.. splice_local.c: In function ‘aln_splice_local_core’: splice_local.c:128:40: warning: variable ‘good_splice’ set but not used [-Wunused-but-set-variable] 128 | int gap_open, gap_ext, gap_oe, good_splice, bad_splice, *sc_matrix; | ^~~~~~~~~~~ In file included from seq.h:27, from splice_local.c:26: ../common/common.h:27:19: warning: ‘free’ called on pointer ‘*(int **)((char *)s_array+(sizetype) i_42*4)’ with nonzero offset 4 [-Wfree-nonheap-object] 27 | #define MYFREE free splice_local.c:249:17: note: in expansion of macro ‘MYFREE’ 249 | MYFREE(s_array[i] + 1); | ^~~~~~ gcc -c -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 splice_bound.c -o splice_bound.o -I. -I.. splice_bound.c: In function ‘aln_splice_bound_core’: splice_bound.c:89:40: warning: variable ‘good_splice’ set but not used [-Wunused-but-set-variable] 89 | int gap_open, gap_ext, gap_oe, good_splice, bad_splice, *sc_matrix; | ^~~~~~~~~~~ In file included from seq.h:27, from splice_bound.c:26: ../common/common.h:27:19: warning: ‘free’ called on pointer ‘*(int **)((char *)s_array+(sizetype) i_272*4)’ with nonzero offset 4 [-Wfree-nonheap-object] 27 | #define MYFREE free splice_bound.c:195:17: note: in expansion of macro ‘MYFREE’ 195 | MYFREE(s_array[i] + 1); | ^~~~~~ gcc -c -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 common_align.c -o common_align.o -I. -I.. common_align.c: In function ‘aln_local_core’: common_align.c:316:41: warning: variable ‘b’ set but not used [-Wunused-but-set-variable] 316 | int gap_open, gap_ext, gap_end, b; | ^ In file included from seq.h:27, from common_align.c:24: ../common/common.h:27:19: warning: ‘free’ called on pointer ‘*(int **)((char *)(void *) ivtmp.507_588)’ with nonzero offset 4 [-Wfree-nonheap-object] 27 | #define MYFREE free common_align.c:503:17: note: in expansion of macro ‘MYFREE’ 503 | MYFREE(s_array[i]); | ^~~~~~ gcc -c -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 seq.c -o seq.o -I. -I.. gcc -c -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 table.c -o table.o -I. -I.. gcc -c -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 align.c -o align.o -I. -I.. gcc -c -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 pwalign.c -o pwalign.o -I. -I.. ar -cru libalign.a aa2nt.o aa2nt_local.o transaln.o splice.o splice_local.o splice_bound.o common_align.o seq.o table.o align.o pwalign.o make[1]: Leaving directory '/usr/src/slapt-src/academic/treebest-ensembl/treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/align_lib' make[1]: Entering directory '/usr/src/slapt-src/academic/treebest-ensembl/treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/phyml' gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -DUNIX -DLH3_REVISION -DLH3_ADDON -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. bionj.c -o bionj.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -DUNIX -DLH3_REVISION -DLH3_ADDON -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. eigen.c -o eigen.o eigen.c: In function ‘cmatinv’: eigen.c:182:12: warning: variable ‘xmax’ set but not used [-Wunused-but-set-variable] 182 | complex xmax, t,t1; | ^~~~ gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -DUNIX -DLH3_REVISION -DLH3_ADDON -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. free.c -o free.o free.c: In function ‘Free_SubTree’: free.c:185:25: warning: unused parameter ‘b_fcus’ [-Wunused-parameter] 185 | void Free_SubTree(edge *b_fcus, node *a, node *d, arbre *tree) | ~~~~~~^~~~~~ free.c: In function ‘Free_Tree_Ins_Tar’: free.c:205:31: warning: unused parameter ‘tree’ [-Wunused-parameter] 205 | void Free_Tree_Ins_Tar(arbre *tree) | ~~~~~~~^~~~ free.c: In function ‘Free_Tree_Lk’: free.c:216:9: warning: variable ‘n’ set but not used [-Wunused-but-set-variable] 216 | node *n; | ^ free.c: In function ‘Free_Node_Lk’: free.c:294:25: warning: unused parameter ‘n’ [-Wunused-parameter] 294 | void Free_Node_Lk(node *n) | ~~~~~~^ gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -DUNIX -DLH3_REVISION -DLH3_ADDON -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. ml.c -o ml.o ml.c: In function ‘Make_Tree_4_Lk’: ml.c:1425:55: warning: unused parameter ‘n_site’ [-Wunused-parameter] 1425 | void Make_Tree_4_Lk(arbre *tree, allseq *alldata, int n_site) | ~~~~^~~~~~ gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -DUNIX -DLH3_REVISION -DLH3_ADDON -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. models.c -o models.o models.c: In function ‘dPMat_K80’: models.c:67:15: warning: variable ‘dTvk’ set but not used [-Wunused-but-set-variable] 67 | double dTvl,dTvk; | ^~~~ models.c:66:15: warning: variable ‘dTsk’ set but not used [-Wunused-but-set-variable] 66 | double dTsl,dTsk; | ^~~~ models.c: In function ‘d2PMat_K80’: models.c:109:16: warning: variable ‘d2Tsk’ set but not used [-Wunused-but-set-variable] 109 | double d2Tsl,d2Tsk; | ^~~~~ models.c: In function ‘Matinv’: models.c:339:46: warning: unused parameter ‘space’ [-Wunused-parameter] 339 | int Matinv (double *x, int n, int m, double *space) | ~~~~~~~~^~~~~ gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -DUNIX -DLH3_REVISION -DLH3_ADDON -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. optimiz.c -o optimiz.o optimiz.c: In function ‘Round_Optimize’: optimiz.c:788:26: warning: variable ‘tol’ set but not used [-Wunused-but-set-variable] 788 | double lk_old, lk_new, tol; | ^~~ optimiz.c: In function ‘Br_Len_NR’: optimiz.c:915:10: warning: variable ‘mult’ set but not used [-Wunused-but-set-variable] 915 | double mult; | ^~~~ optimiz.c:914:11: warning: variable ‘r_l’ set but not used [-Wunused-but-set-variable] 914 | int l_r,r_l; | ^~~ optimiz.c:914:7: warning: variable ‘l_r’ set but not used [-Wunused-but-set-variable] 914 | int l_r,r_l; | ^~~ optimiz.c:909:38: warning: unused parameter ‘alldata’ [-Wunused-parameter] 909 | double Br_Len_NR(arbre *tree,allseq *alldata, edge *b_fcus, int n_passes) | ~~~~~~~~^~~~~~~ optimiz.c: In function ‘Print_Lk_Progress’: optimiz.c:1113:31: warning: unused parameter ‘tree’ [-Wunused-parameter] 1113 | void Print_Lk_Progress(arbre *tree, double lk_new, double lk_old, int n_iter) | ~~~~~~~^~~~ optimiz.c: In function ‘Optimiz_Ext_Br’: optimiz.c:1150:10: warning: variable ‘lk’ set but not used [-Wunused-but-set-variable] 1150 | double lk, lk_init; | ^~ optimiz.c: In function ‘Optimiz_All_Free_Param’: optimiz.c:1230:7: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1230 | if(verbose) printf("\n. Optimisation of the ts/tv ratio...\n");fflush(stdout); | ^~ optimiz.c:1230:70: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1230 | if(verbose) printf("\n. Optimisation of the ts/tv ratio...\n");fflush(stdout); | ^~~~~~ optimiz.c:1244:7: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1244 | if(verbose) printf("\n. Optimisation of the proportion of invariable sites...\n");fflush(stdout); | ^~ optimiz.c:1244:89: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1244 | if(verbose) printf("\n. Optimisation of the proportion of invariable sites...\n");fflush(stdout); | ^~~~~~ optimiz.c:1252:7: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1252 | if(verbose) printf("\n. Optimisation of the gamma shape parameter...\n");fflush(stdout); | ^~ optimiz.c:1252:80: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1252 | if(verbose) printf("\n. Optimisation of the gamma shape parameter...\n");fflush(stdout); | ^~~~~~ gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -DUNIX -DLH3_REVISION -DLH3_ADDON -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. options.c -o options.o options.c: In function ‘Get_Input_CommandLine_Common’: options.c:230:54: warning: unused parameter ‘argc’ [-Wunused-parameter] 230 | void Get_Input_CommandLine_Common(option *input, int argc, char **argv) | ~~~~^~~~ options.c: In function ‘Get_Input_Interactive’: options.c:915:41: warning: this statement may fall through [-Wimplicit-fallthrough=] 915 | input->mod->s_opt->opt_topo = | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 916 | (input->mod->s_opt->opt_topo)?(0):(1); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ options.c:918:9: note: here 918 | case 'W' : | ^~~~ gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -DUNIX -DLH3_REVISION -DLH3_ADDON -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. simu.c -o simu.o simu.c: In function ‘Simu’: simu.c:177:13: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 177 | if(tree->mod->s_opt->print) | ^~ simu.c:178:62: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 178 | printf("\n\n. Last optimization step...\n"); fflush(NULL); | ^~~~~~ simu.c:54:36: warning: variable ‘diff_lk’ set but not used [-Wunused-but-set-variable] 54 | double old_loglk,n_iter,lambda,diff_lk; | ^~~~~~~ simu.c: In function ‘Select_Edges_To_Swap’: simu.c:189:7: warning: variable ‘min’ set but not used [-Wunused-but-set-variable] 189 | int min; | ^~~ gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -DUNIX -DLH3_REVISION -DLH3_ADDON -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. utilities.c -o utilities.o utilities.c: In function ‘Make_Edge_Lk’: utilities.c:824:7: warning: variable ‘len’ set but not used [-Wunused-but-set-variable] 824 | int len; | ^~~ utilities.c: In function ‘Make_Node_Lk’: utilities.c:922:25: warning: unused parameter ‘n’ [-Wunused-parameter] 922 | void Make_Node_Lk(node *n) | ~~~~~~^ utilities.c: In function ‘Get_Seq’: utilities.c:930:35: warning: unused parameter ‘rw’ [-Wunused-parameter] 930 | seq **Get_Seq(option *input, int rw) | ~~~~^~ utilities.c: In function ‘Sort_Edges_Diff_Lk’: utilities.c:2203:31: warning: unused parameter ‘tree’ [-Wunused-parameter] 2203 | int Sort_Edges_Diff_Lk(arbre *tree, edge **sorted_edges, int n_elem) | ~~~~~~~^~~~ utilities.c: In function ‘NNI’: utilities.c:2227:9: warning: variable ‘v1’ set but not used [-Wunused-but-set-variable] 2227 | node *v1,*v2,*v3,*v4; | ^~ utilities.c:2226:7: warning: variable ‘l_r’ set but not used [-Wunused-but-set-variable] 2226 | int l_r, r_l, l_v1, l_v2, r_v3, r_v4; | ^~~ utilities.c: In function ‘Swap’: utilities.c:2410:54: warning: unused parameter ‘tree’ [-Wunused-parameter] 2410 | void Swap(node *a, node *b, node *c, node *d, arbre *tree) | ~~~~~~~^~~~ utilities.c: In function ‘Print_Fp_Out’: utilities.c:2737:93: warning: unused parameter ‘n_data_set’ [-Wunused-parameter] 2737 | void Print_Fp_Out(FILE *fp_out, time_t t_beg, time_t t_end, arbre *tree, option *input, int n_data_set) | ~~~~^~~~~~~~~~ utilities.c: In function ‘Print_Fp_Out_Lines’: utilities.c:2848:46: warning: unused parameter ‘t_beg’ [-Wunused-parameter] 2848 | void Print_Fp_Out_Lines(FILE *fp_out, time_t t_beg, time_t t_end, arbre *tree, option *input, int n_data_set) | ~~~~~~~^~~~~ utilities.c:2848:60: warning: unused parameter ‘t_end’ [-Wunused-parameter] 2848 | void Print_Fp_Out_Lines(FILE *fp_out, time_t t_beg, time_t t_end, arbre *tree, option *input, int n_data_set) | ~~~~~~~^~~~~ utilities.c: In function ‘K2P_dist’: utilities.c:3065:10: warning: variable ‘unc_len’ set but not used [-Wunused-but-set-variable] 3065 | double unc_len; | ^~~~~~~ utilities.c: In function ‘JC69_Dist’: utilities.c:3172:10: warning: variable ‘unc_len’ set but not used [-Wunused-but-set-variable] 3172 | double unc_len; | ^~~~~~~ utilities.c: In function ‘Hamming_Dist’: utilities.c:3247:10: warning: variable ‘unc_len’ set but not used [-Wunused-but-set-variable] 3247 | double unc_len; | ^~~~~~~ g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -DUNIX -DLH3_REVISION -DLH3_ADDON -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. lh3_addon.cc -o lh3_addon.o g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -DUNIX -DLH3_REVISION -DLH3_ADDON -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. lh3_spec.cc -o lh3_spec.o lh3_spec.cc: In function ‘double lh3_spec_update_one_ratio(arbre*, edge*)’: lh3_spec.cc:214:53: warning: unused parameter ‘b_fcus’ [-Wunused-parameter] 214 | double lh3_spec_update_one_ratio(arbre *tree, edge *b_fcus) | ~~~~~~^~~~~~ ar -cru libphyml.a bionj.o eigen.o free.o ml.o models.o optimiz.o options.o simu.o utilities.o lh3_addon.o lh3_spec.o make[1]: Leaving directory '/usr/src/slapt-src/academic/treebest-ensembl/treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/phyml' gcc -c -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -DTR_VERSION="\"1.9.2\"" -DTR_BUILD=\"`date +%d%b%Y`\" main.c -o main.o g++ -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 main.o -o treebest -L. -lphylotree -Lalign_lib -lalign -lm -Lphyml -lphyml make[1]: Entering directory '/usr/src/slapt-src/academic/treebest-ensembl/treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290' make[1]: Nothing to be done for 'lib'. make[1]: Leaving directory '/usr/src/slapt-src/academic/treebest-ensembl/treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290' make[1]: Entering directory '/usr/src/slapt-src/academic/treebest-ensembl/treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/align_lib' make[1]: Nothing to be done for 'lib'. make[1]: Leaving directory '/usr/src/slapt-src/academic/treebest-ensembl/treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/align_lib' make[1]: Entering directory '/usr/src/slapt-src/academic/treebest-ensembl/treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/phyml' make[1]: Nothing to be done for 'lib'. make[1]: Leaving directory '/usr/src/slapt-src/academic/treebest-ensembl/treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/phyml' fluid -c flnjtree_ui.fl g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. flnjtree.cc -o flnjtree.o g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. flnjtree_ui.cc -o flnjtree_ui.o g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. flglobal.cc -o flglobal.o flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] 6 | Fl_Menu_Item menu_format[] = { {"auto"}, {"fasta"}, {"aln"}, {0} }; | ^ flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] 7 | Fl_Menu_Item menu_type[] = { {"amino acid"}, {"codon"}, {0} }; | ^ flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] 8 | Fl_Menu_Item menu_nt_type[] = { {"merge"}, {"synonymous"}, {"nonsynonymous"}, {0} }; | ^ flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] 9 | Fl_Menu_Item menu_aa_type[] = { {"mismatch"}, {"Kimura"}, {"JTT"}, {0} }; | ^ flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] 10 | Fl_Menu_Item menu_workspace[] = { {"Artemis"}, {"Dionysus"}, {"Selena"}, {0} }; | ^ flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] 11 | Fl_Menu_Item menu_phyml_type[] = { {"nucleotide"}, {"amino acid"}, {0} }; | ^ flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] 12 | Fl_Menu_Item menu_phyml_nt_model[] = { {"HKY"}, {"JC69"}, {"K2P"}, {"F81"}, {"F84"}, {"TN93"}, {"GTR"}, {0} }; | ^ flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] 13 | Fl_Menu_Item menu_phyml_aa_model[] = { {"WAG"}, {"JTT"}, {"MtREV"}, {"Dayhoff"}, {0} }; | ^ flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:15:24: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 15 | char *g_workspace[] = {"Artemis", "Dionysis", "Selena"}; | ^~~~~~~~~ flglobal.cc:15:35: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 15 | char *g_workspace[] = {"Artemis", "Dionysis", "Selena"}; | ^~~~~~~~~~ flglobal.cc:15:47: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 15 | char *g_workspace[] = {"Artemis", "Dionysis", "Selena"}; | ^~~~~~~~ g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. flworkspace.cc -o flworkspace.o g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -I. flcallback.cc -o flcallback.o flcallback.cc: In function ‘void cb_phyml(Fl_Widget*, void*)’: flcallback.cc:5:26: warning: unused parameter ‘w’ [-Wunused-parameter] 5 | void cb_phyml(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_phyml_inv(Fl_Widget*, void*)’: flcallback.cc:16:30: warning: unused parameter ‘w’ [-Wunused-parameter] 16 | void cb_phyml_inv(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_phyml_alpha(Fl_Widget*, void*)’: flcallback.cc:22:32: warning: unused parameter ‘w’ [-Wunused-parameter] 22 | void cb_phyml_alpha(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_phyml_has_tree(Fl_Widget*, void*)’: flcallback.cc:28:35: warning: unused parameter ‘w’ [-Wunused-parameter] 28 | void cb_phyml_has_tree(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_phyml_tstv(Fl_Widget*, void*)’: flcallback.cc:34:31: warning: unused parameter ‘w’ [-Wunused-parameter] 34 | void cb_phyml_tstv(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_phyml_n_cat(Fl_Widget*, void*)’: flcallback.cc:41:32: warning: unused parameter ‘w’ [-Wunused-parameter] 41 | void cb_phyml_n_cat(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_phyml_browse(Fl_Widget*, void*)’: flcallback.cc:73:33: warning: unused parameter ‘w’ [-Wunused-parameter] 73 | void cb_phyml_browse(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_phyml_tree(Fl_Widget*, void*)’: flcallback.cc:84:20: warning: ‘int fl_ask(const char*, ...)’ is deprecated [-Wdeprecated-declarations] 84 | if (!fl_ask("Building ML tree is usually very slow.\nFLtreeBeST might not respond for a long time.\nBe patient, or explicitly kill the program.")) { | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/FL/Fl_File_Chooser.H:46, from flglobal.h:10, from flcallback.cc:2: /usr/include/FL/fl_ask.H:55:15: note: declared here 55 | FL_EXPORT int fl_ask(const char *,...) __fl_attr((__format__ (__printf__, 1, 2), __deprecated__)); | ^~~~~~ flcallback.cc:89:58: warning: format ‘%s’ expects argument of type ‘char*’, but argument 2 has type ‘Workspace*’ [-Wformat=] 89 | fl_alert("No tree is found in workspace %s.", g->workspace[g->phyml->i_tree->value()]); | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | char* Workspace* flcallback.cc:82:31: warning: unused parameter ‘w’ [-Wunused-parameter] 82 | void cb_phyml_tree(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_build(Fl_Widget*, void*)’: flcallback.cc:98:26: warning: unused parameter ‘w’ [-Wunused-parameter] 98 | void cb_build(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_merge(Fl_Widget*, void*)’: flcallback.cc:108:26: warning: unused parameter ‘w’ [-Wunused-parameter] 108 | void cb_merge(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_compare(Fl_Widget*, void*)’: flcallback.cc:113:28: warning: unused parameter ‘w’ [-Wunused-parameter] 113 | void cb_compare(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_backtrans(Fl_Widget*, void*)’: flcallback.cc:118:30: warning: unused parameter ‘w’ [-Wunused-parameter] 118 | void cb_backtrans(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_close_build(Fl_Widget*, void*)’: flcallback.cc:123:32: warning: unused parameter ‘w’ [-Wunused-parameter] 123 | void cb_close_build(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_close_phyml(Fl_Widget*, void*)’: flcallback.cc:128:32: warning: unused parameter ‘w’ [-Wunused-parameter] 128 | void cb_close_phyml(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_close_merge(Fl_Widget*, void*)’: flcallback.cc:133:32: warning: unused parameter ‘w’ [-Wunused-parameter] 133 | void cb_close_merge(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_close_backtrans(Fl_Widget*, void*)’: flcallback.cc:138:36: warning: unused parameter ‘w’ [-Wunused-parameter] 138 | void cb_close_backtrans(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_close_compare(Fl_Widget*, void*)’: flcallback.cc:143:34: warning: unused parameter ‘w’ [-Wunused-parameter] 143 | void cb_close_compare(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_build_tree(Fl_Widget*, void*)’: flcallback.cc:152:58: warning: format ‘%s’ expects argument of type ‘char*’, but argument 2 has type ‘Workspace*’ [-Wformat=] 152 | fl_alert("No tree is found in workspace %s.", g->workspace[g->build->i_cons_tree->value()]); | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | char* Workspace* flcallback.cc:148:31: warning: unused parameter ‘w’ [-Wunused-parameter] 148 | void cb_build_tree(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_toggle_cons(Fl_Widget*, void*)’: flcallback.cc:159:32: warning: unused parameter ‘w’ [-Wunused-parameter] 159 | void cb_toggle_cons(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_do_backtrans(Fl_Widget*, void*)’: flcallback.cc:166:33: warning: unused parameter ‘w’ [-Wunused-parameter] 166 | void cb_do_backtrans(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_merge_tree(Fl_Widget*, void*)’: flcallback.cc:172:31: warning: unused parameter ‘w’ [-Wunused-parameter] 172 | void cb_merge_tree(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_compare_tree(Fl_Widget*, void*)’: flcallback.cc:179:33: warning: unused parameter ‘w’ [-Wunused-parameter] 179 | void cb_compare_tree(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_prev(Fl_Widget*, void*)’: flcallback.cc:186:25: warning: unused parameter ‘w’ [-Wunused-parameter] 186 | void cb_prev(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_next(Fl_Widget*, void*)’: flcallback.cc:192:25: warning: unused parameter ‘w’ [-Wunused-parameter] 192 | void cb_next(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_update_buttons(Fl_Widget*, void*)’: flcallback.cc:198:35: warning: unused parameter ‘w’ [-Wunused-parameter] 198 | void cb_update_buttons(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_open(Fl_Widget*, void*)’: flcallback.cc:227:25: warning: unused parameter ‘w’ [-Wunused-parameter] 227 | void cb_open(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_save(Fl_Widget*, void*)’: flcallback.cc:241:25: warning: unused parameter ‘w’ [-Wunused-parameter] 241 | void cb_save(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_expt(Fl_Widget*, void*)’: flcallback.cc:249:25: warning: unused parameter ‘w’ [-Wunused-parameter] 249 | void cb_expt(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_root(Fl_Widget*, void*)’: flcallback.cc:257:25: warning: unused parameter ‘w’ [-Wunused-parameter] 257 | void cb_root(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_browse(Fl_Widget*, void*)’: flcallback.cc:263:27: warning: unused parameter ‘w’ [-Wunused-parameter] 263 | void cb_browse(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_browse_aa_aln(Fl_Widget*, void*)’: flcallback.cc:272:34: warning: unused parameter ‘w’ [-Wunused-parameter] 272 | void cb_browse_aa_aln(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_browse_nt_seq(Fl_Widget*, void*)’: flcallback.cc:281:34: warning: unused parameter ‘w’ [-Wunused-parameter] 281 | void cb_browse_nt_seq(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_browse_nt_aln(Fl_Widget*, void*)’: flcallback.cc:290:34: warning: unused parameter ‘w’ [-Wunused-parameter] 290 | void cb_browse_nt_aln(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_zoom_in_x(Fl_Widget*, void*)’: flcallback.cc:313:30: warning: unused parameter ‘w’ [-Wunused-parameter] 313 | void cb_zoom_in_x(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_zoom_out_x(Fl_Widget*, void*)’: flcallback.cc:320:31: warning: unused parameter ‘w’ [-Wunused-parameter] 320 | void cb_zoom_out_x(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_zoom_in_y(Fl_Widget*, void*)’: flcallback.cc:327:30: warning: unused parameter ‘w’ [-Wunused-parameter] 327 | void cb_zoom_in_y(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_zoom_out_y(Fl_Widget*, void*)’: flcallback.cc:334:31: warning: unused parameter ‘w’ [-Wunused-parameter] 334 | void cb_zoom_out_y(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_small_font(Fl_Widget*, void*)’: flcallback.cc:341:31: warning: unused parameter ‘w’ [-Wunused-parameter] 341 | void cb_small_font(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_large_font(Fl_Widget*, void*)’: flcallback.cc:347:31: warning: unused parameter ‘w’ [-Wunused-parameter] 347 | void cb_large_font(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_spec(Fl_Widget*, void*)’: flcallback.cc:353:25: warning: unused parameter ‘w’ [-Wunused-parameter] 353 | void cb_spec(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_real(Fl_Widget*, void*)’: flcallback.cc:359:25: warning: unused parameter ‘w’ [-Wunused-parameter] 359 | void cb_real(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_order(Fl_Widget*, void*)’: flcallback.cc:365:26: warning: unused parameter ‘w’ [-Wunused-parameter] 365 | void cb_order(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ g++ -O2 -march=i586 -mtune=i686 -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -o fltreebest flnjtree.o flnjtree_ui.o flglobal.o flworkspace.o flcallback.o `fltk-config --cxxflags` `fltk-config --ldstaticflags` -L. -lphylotree -Lalign_lib -lalign -lm -Lphyml -lphyml; \ fltk-config --post fltreebest /usr/bin/ld: flnjtree.o: in function `main': flnjtree.cc:(.text.startup+0x1c): undefined reference to `FL_NORMAL_SIZE' /usr/bin/ld: flnjtree.cc:(.text.startup+0xc0): undefined reference to `Fl::run()' /usr/bin/ld: flnjtree_ui.o: in function `make_build_window(void*)': flnjtree_ui.cc:(.text+0x5b): undefined reference to `Fl_Double_Window::Fl_Double_Window(int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x60): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0xad): undefined reference to `Fl_Return_Button::Fl_Return_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xb2): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x102): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x107): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x157): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x15c): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1ac): undefined reference to `Fl_Input::Fl_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1f2): undefined reference to `Fl_Choice::Fl_Choice(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1f7): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x212): undefined reference to `Fl_Menu_::menu(Fl_Menu_Item const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x25c): undefined reference to `Fl_Choice::Fl_Choice(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x261): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x27c): undefined reference to `Fl_Menu_::menu(Fl_Menu_Item const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2bf): undefined reference to `Fl_Choice::Fl_Choice(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2c4): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2df): undefined reference to `Fl_Menu_::menu(Fl_Menu_Item const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x322): undefined reference to `Fl_Int_Input::Fl_Int_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x36a): undefined reference to `Fl_Input_::value(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x3ad): undefined reference to `Fl_Int_Input::Fl_Int_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x3f5): undefined reference to `Fl_Input_::value(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x438): undefined reference to `Fl_Progress::Fl_Progress(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x458): undefined reference to `Fl_Widget::redraw()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x467): undefined reference to `Fl_Widget::redraw()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x476): undefined reference to `Fl_Widget::redraw()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x4b9): undefined reference to `Fl_Check_Button::Fl_Check_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x4ca): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x51e): undefined reference to `Fl_Choice::Fl_Choice(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x523): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x537): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x548): undefined reference to `Fl_Menu_::menu(Fl_Menu_Item const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x589): undefined reference to `Fl_Check_Button::Fl_Check_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x59a): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x5af): undefined reference to `Fl_Button::value(int)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x5b7): undefined reference to `Fl_Group::end()' /usr/bin/ld: flnjtree_ui.o: in function `make_merge_window(void*)': flnjtree_ui.cc:(.text+0x67b): undefined reference to `Fl_Double_Window::Fl_Double_Window(int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x680): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x6c9): undefined reference to `Fl_Choice::Fl_Choice(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x6ce): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x6e9): undefined reference to `Fl_Menu_::menu(Fl_Menu_Item const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x72c): undefined reference to `Fl_Choice::Fl_Choice(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x731): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x74c): undefined reference to `Fl_Menu_::menu(Fl_Menu_Item const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x78f): undefined reference to `Fl_Return_Button::Fl_Return_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x794): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x7e4): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x7e9): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x7fe): undefined reference to `Fl_Group::end()' /usr/bin/ld: flnjtree_ui.o: in function `make_comp_window(void*)': flnjtree_ui.cc:(.text+0x87b): undefined reference to `Fl_Double_Window::Fl_Double_Window(int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x880): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x8c9): undefined reference to `Fl_Choice::Fl_Choice(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x8ce): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x8e6): undefined reference to `Fl_Menu_::menu(Fl_Menu_Item const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x92c): undefined reference to `Fl_Return_Button::Fl_Return_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x931): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x981): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x986): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x99b): undefined reference to `Fl_Group::end()' /usr/bin/ld: flnjtree_ui.o: in function `make_trans_window(void*)': flnjtree_ui.cc:(.text+0xa0b): undefined reference to `Fl_Double_Window::Fl_Double_Window(int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xa10): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0xa56): undefined reference to `Fl_Input::Fl_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xa9c): undefined reference to `Fl_Input::Fl_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xae2): undefined reference to `Fl_Input::Fl_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xb28): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xb2d): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0xb7d): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xb82): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0xbd2): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xbd7): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0xc27): undefined reference to `Fl_Return_Button::Fl_Return_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xc2c): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0xc7c): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xc81): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0xc96): undefined reference to `Fl_Group::end()' /usr/bin/ld: flnjtree_ui.o: in function `make_phyml_window(void*)': flnjtree_ui.cc:(.text+0xd2b): undefined reference to `Fl_Double_Window::Fl_Double_Window(int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xd30): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0xd76): undefined reference to `Fl_Input::Fl_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xdbc): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xdc1): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0xe11): undefined reference to `Fl_Choice::Fl_Choice(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xe16): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0xe31): undefined reference to `Fl_Menu_::menu(Fl_Menu_Item const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xe7b): undefined reference to `Fl_Choice::Fl_Choice(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xe80): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0xe9b): undefined reference to `Fl_Menu_::menu(Fl_Menu_Item const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xede): undefined reference to `Fl_Choice::Fl_Choice(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xee3): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0xefe): undefined reference to `Fl_Menu_::menu(Fl_Menu_Item const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xf41): undefined reference to `Fl_Choice::Fl_Choice(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xf52): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xf57): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0xf66): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0xf7a): undefined reference to `Fl_Menu_::menu(Fl_Menu_Item const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xfbd): undefined reference to `Fl_Check_Button::Fl_Check_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xfce): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xfe3): undefined reference to `Fl_Button::value(int)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1030): undefined reference to `Fl_Float_Input::Fl_Float_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1041): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x107d): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1091): undefined reference to `Fl_Input_::value(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x10d4): undefined reference to `Fl_Check_Button::Fl_Check_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x10e5): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x10fd): undefined reference to `Fl_Button::value(int)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x114a): undefined reference to `Fl_Int_Input::Fl_Int_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x115b): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x11a3): undefined reference to `Fl_Input_::value(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x11f0): undefined reference to `Fl_Float_Input::Fl_Float_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1201): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x123d): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1251): undefined reference to `Fl_Input_::value(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1294): undefined reference to `Fl_Check_Button::Fl_Check_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x12a5): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x12b1): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x12c2): undefined reference to `Fl_Button::value(int)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x130f): undefined reference to `Fl_Progress::Fl_Progress(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1320): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1336): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1379): undefined reference to `Fl_Return_Button::Fl_Return_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x137e): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x13ce): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x13d3): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1423): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1434): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1439): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1444): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1487): undefined reference to `Fl_Float_Input::Fl_Float_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1498): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x14e0): undefined reference to `Fl_Input_::value(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1523): undefined reference to `Fl_Check_Button::Fl_Check_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1534): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1549): undefined reference to `Fl_Button::value(int)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1596): undefined reference to `Fl_Int_Input::Fl_Int_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x15ac): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x15f4): undefined reference to `Fl_Input_::value(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1632): undefined reference to `Fl_Check_Button::Fl_Check_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1648): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x165d): undefined reference to `Fl_Button::value(int)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x169e): undefined reference to `Fl_Float_Input::Fl_Float_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x16df): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x171d): undefined reference to `Fl_Float_Input::Fl_Float_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1759): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x179c): undefined reference to `Fl_Float_Input::Fl_Float_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x17dd): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x181b): undefined reference to `Fl_Check_Button::Fl_Check_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1827): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x186a): undefined reference to `Fl_Choice::Fl_Choice(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x186f): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1883): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x18c1): undefined reference to `Fl_Check_Button::Fl_Check_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x18d7): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x18e3): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1921): undefined reference to `Fl_Int_Input::Fl_Int_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1969): undefined reference to `Fl_Input_::value(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1971): undefined reference to `Fl_Group::end()' /usr/bin/ld: flnjtree_ui.o: in function `make_main_window(void*)': flnjtree_ui.cc:(.text+0x1a98): undefined reference to `Fl_Double_Window::Fl_Double_Window(int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1ad9): undefined reference to `Fl_Tabs::Fl_Tabs(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1ade): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1b28): undefined reference to `Fl_Group::Fl_Group(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1b74): undefined reference to `Fl_Scroll::Fl_Scroll(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1bfc): undefined reference to `Fl_Group::end()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1c08): undefined reference to `Fl_Group::end()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1c4c): undefined reference to `Fl_Group::Fl_Group(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1c5f): undefined reference to `Fl_Widget::hide()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1ca0): undefined reference to `Fl_Scroll::Fl_Scroll(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1d28): undefined reference to `Fl_Group::end()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1d34): undefined reference to `Fl_Group::end()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1d78): undefined reference to `Fl_Group::Fl_Group(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1d8b): undefined reference to `Fl_Widget::hide()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1dcc): undefined reference to `Fl_Scroll::Fl_Scroll(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1e54): undefined reference to `Fl_Group::end()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1e60): undefined reference to `Fl_Group::end()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1e7e): undefined reference to `Fl_Group::end()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1ebc): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1ed2): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1ed7): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1f30): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1f41): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1f46): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1f5f): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1faf): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1fc5): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1fca): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1fe3): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x202e): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2044): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2049): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x20a2): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x20b8): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x20bd): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x20d6): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2124): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2135): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x213a): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2195): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x21ab): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x21b0): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2206): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x221c): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2221): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x227a): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2290): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2295): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x22ee): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x22ff): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2304): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2362): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2378): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x237d): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x23d6): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x23ec): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x23f1): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x244a): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2460): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2465): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x24be): undefined reference to `Fl_Light_Button::Fl_Light_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x24cf): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x24d4): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2539): undefined reference to `Fl_Light_Button::Fl_Light_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x254f): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2554): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2580): undefined reference to `Fl_Button::value(int)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x25c5): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x25db): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x25e0): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x25f9): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2644): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x265a): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x265f): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2678): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x26c3): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x26d4): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x26d9): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x26f2): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2742): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2753): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2758): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x27af): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x27c5): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x27ca): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x281c): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2832): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2837): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2890): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x28a1): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x28a6): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x28c9): undefined reference to `Fl_Group::end()' /usr/bin/ld: flnjtree_ui.o: in function `cb_Help(Fl_Button*, void*)': flnjtree_ui.cc:(.text+0xa): undefined reference to `fl_message(char const*, ...)' /usr/bin/ld: flglobal.o: in function `progress_func(double)': flglobal.cc:(.text+0x60): undefined reference to `Fl_Widget::redraw()' /usr/bin/ld: flglobal.cc:(.text+0x71): undefined reference to `Fl_Widget::label(char const*)' /usr/bin/ld: flglobal.cc:(.text+0x76): undefined reference to `Fl::flush()' /usr/bin/ld: flglobal.o: in function `FNglobal::FNglobal()': flglobal.cc:(.text+0xcc): undefined reference to `Fl_File_Chooser::Fl_File_Chooser(char const*, char const*, int, char const*)' /usr/bin/ld: flglobal.cc:(.text+0x109): undefined reference to `Fl_File_Chooser::Fl_File_Chooser(char const*, char const*, int, char const*)' /usr/bin/ld: flglobal.cc:(.text+0x143): undefined reference to `Fl_File_Chooser::Fl_File_Chooser(char const*, char const*, int, char const*)' /usr/bin/ld: flglobal.cc:(.text+0x180): undefined reference to `Fl_File_Chooser::Fl_File_Chooser(char const*, char const*, int, char const*)' /usr/bin/ld: flglobal.cc:(.text+0x1ba): undefined reference to `Fl_File_Chooser::Fl_File_Chooser(char const*, char const*, int, char const*)' /usr/bin/ld: flglobal.o:flglobal.cc:(.text+0x1f7): more undefined references to `Fl_File_Chooser::Fl_File_Chooser(char const*, char const*, int, char const*)' follow /usr/bin/ld: flglobal.o: in function `FNglobal::FNglobal()': flglobal.cc:(.text+0x28e): undefined reference to `Fl_File_Chooser::textsize(int)' /usr/bin/ld: flglobal.cc:(.text+0x2a2): undefined reference to `Fl_File_Chooser::textsize(int)' /usr/bin/ld: flglobal.cc:(.text+0x2b6): undefined reference to `Fl_File_Chooser::textsize(int)' /usr/bin/ld: flglobal.cc:(.text+0x2c5): undefined reference to `Fl_File_Chooser::textsize(int)' /usr/bin/ld: flglobal.o: in function `FNglobal::active_ws()': flglobal.cc:(.text+0x4a3): undefined reference to `Fl_Widget::visible_r() const' /usr/bin/ld: flglobal.o: in function `FNglobal::change_ws(int)': flglobal.cc:(.text+0x4e3): undefined reference to `Fl_Widget::visible_r() const' /usr/bin/ld: flglobal.o: in function `FNphyml::do_phyml()': flglobal.cc:(.text+0x932): undefined reference to `fl_alert(char const*, ...)' /usr/bin/ld: flglobal.o: in function `FNglobal::~FNglobal()': flglobal.cc:(.text+0xb57): undefined reference to `Fl_File_Chooser::~Fl_File_Chooser()' /usr/bin/ld: flglobal.cc:(.text+0xb77): undefined reference to `Fl_File_Chooser::~Fl_File_Chooser()' /usr/bin/ld: flglobal.cc:(.text+0xb97): undefined reference to `Fl_File_Chooser::~Fl_File_Chooser()' /usr/bin/ld: flglobal.cc:(.text+0xbb7): undefined reference to `Fl_File_Chooser::~Fl_File_Chooser()' /usr/bin/ld: flglobal.cc:(.text+0xbd7): undefined reference to `Fl_File_Chooser::~Fl_File_Chooser()' /usr/bin/ld: flglobal.o:flglobal.cc:(.text+0xbfc): more undefined references to `Fl_File_Chooser::~Fl_File_Chooser()' follow /usr/bin/ld: flglobal.o: in function `FNglobal::~FNglobal()': flglobal.cc:(.text+0xc74): undefined reference to `Fl_Widget::~Fl_Widget()' /usr/bin/ld: flglobal.o: in function `FNmerge::merge()': flglobal.cc:(.text+0xf73): undefined reference to `fl_alert(char const*, ...)' /usr/bin/ld: flglobal.cc:(.text+0xf8a): undefined reference to `fl_alert(char const*, ...)' /usr/bin/ld: flglobal.cc:(.text+0xfa5): undefined reference to `fl_alert(char const*, ...)' /usr/bin/ld: flglobal.o: in function `FNcompare::compare()': flglobal.cc:(.text+0x1022): undefined reference to `Fl_Widget::visible_r() const' /usr/bin/ld: flglobal.cc:(.text+0x1082): undefined reference to `Fl_Widget::visible_r() const' /usr/bin/ld: flglobal.cc:(.text+0x10de): undefined reference to `Fl_Widget::visible_r() const' /usr/bin/ld: flglobal.cc:(.text+0x1113): undefined reference to `fl_alert(char const*, ...)' /usr/bin/ld: flglobal.o: in function `FNbacktrans::backtrans()': flglobal.cc:(.text+0x129d): undefined reference to `fl_alert(char const*, ...)' /usr/bin/ld: flglobal.o: in function `Workspace::~Workspace()': flglobal.cc:(.text._ZN9WorkspaceD0Ev[_ZN9WorkspaceD5Ev]+0x1d): undefined reference to `Fl_Widget::~Fl_Widget()' /usr/bin/ld: flglobal.o: in function `Workspace::~Workspace()': flglobal.cc:(.text._ZN9WorkspaceD2Ev[_ZN9WorkspaceD5Ev]+0x25): undefined reference to `Fl_Widget::~Fl_Widget()' /usr/bin/ld: flworkspace.o: in function `Workspace::Workspace(int, int, int, int)': flworkspace.cc:(.text+0x3d): undefined reference to `Fl_Widget::Fl_Widget(int, int, int, int, char const*)' /usr/bin/ld: flworkspace.o: in function `Workspace::redraw()': flworkspace.cc:(.text+0x19f): undefined reference to `Fl_Widget::redraw()' /usr/bin/ld: flworkspace.o: in function `Workspace::draw_tree()': flworkspace.cc:(.text+0x1e3): undefined reference to `fl_graphics_driver' /usr/bin/ld: flworkspace.cc:(.text+0x287): undefined reference to `fl_width(char const*)' /usr/bin/ld: flworkspace.cc:(.text+0x411): undefined reference to `fl_graphics_driver' /usr/bin/ld: flworkspace.cc:(.text+0x49a): undefined reference to `fl_draw(char const*, int, int)' /usr/bin/ld: flworkspace.cc:(.text+0x4b5): undefined reference to `fl_graphics_driver' /usr/bin/ld: flworkspace.cc:(.text+0x553): undefined reference to `fl_width(char const*)' /usr/bin/ld: flworkspace.cc:(.text+0x58e): undefined reference to `fl_draw(char const*, int, int)' /usr/bin/ld: flworkspace.cc:(.text+0x5a7): undefined reference to `fl_graphics_driver' /usr/bin/ld: flworkspace.cc:(.text+0x6c5): undefined reference to `fl_width(char const*)' /usr/bin/ld: flworkspace.cc:(.text+0x6fb): undefined reference to `fl_draw(char const*, int, int)' /usr/bin/ld: flworkspace.cc:(.text+0x70b): undefined reference to `fl_graphics_driver' /usr/bin/ld: flworkspace.cc:(.text+0x7e5): undefined reference to `fl_graphics_driver' /usr/bin/ld: flworkspace.cc:(.text+0x8f4): undefined reference to `fl_graphics_driver' /usr/bin/ld: flworkspace.cc:(.text+0x99f): undefined reference to `fl_graphics_driver' /usr/bin/ld: flworkspace.cc:(.text+0xa12): undefined reference to `fl_graphics_driver' /usr/bin/ld: flworkspace.o:flworkspace.cc:(.text+0xa7e): more undefined references to `fl_graphics_driver' follow /usr/bin/ld: flworkspace.o: in function `Workspace::draw()': flworkspace.cc:(.text+0xd3f): undefined reference to `Fl_Widget::draw_box() const' /usr/bin/ld: flworkspace.o: in function `Workspace::redraw()': flworkspace.cc:(.text+0x1b2): undefined reference to `Fl_Widget::redraw()' /usr/bin/ld: flworkspace.o: in function `Workspace::Workspace(int, int, int, int) [clone .cold]': flworkspace.cc:(.text.unlikely+0x4): undefined reference to `Fl_Widget::~Fl_Widget()' /usr/bin/ld: flworkspace.o:(.rodata._ZTI9Workspace[_ZTI9Workspace]+0x8): undefined reference to `typeinfo for Fl_Widget' /usr/bin/ld: flworkspace.o:(.rodata._ZTV9Workspace[_ZTV9Workspace]+0x14): undefined reference to `Fl_Widget::handle(int)' /usr/bin/ld: flworkspace.o:(.rodata._ZTV9Workspace[_ZTV9Workspace]+0x18): undefined reference to `Fl_Widget::resize(int, int, int, int)' /usr/bin/ld: flworkspace.o:(.rodata._ZTV9Workspace[_ZTV9Workspace]+0x1c): undefined reference to `Fl_Widget::show()' /usr/bin/ld: flworkspace.o:(.rodata._ZTV9Workspace[_ZTV9Workspace]+0x20): undefined reference to `Fl_Widget::hide()' /usr/bin/ld: flcallback.o: in function `cb_phyml(Fl_Widget*, void*)': flcallback.cc:(.text+0x13): undefined reference to `fl_message(char const*, ...)' /usr/bin/ld: flcallback.cc:(.text+0x3a): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.cc:(.text+0x59): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.o: in function `cb_phyml_n_cat(Fl_Widget*, void*)': flcallback.cc:(.text+0x158): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.cc:(.text+0x189): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.o: in function `cb_phyml_type(Fl_Widget*, void*)': flcallback.cc:(.text+0x1ea): undefined reference to `Fl_Menu_::clear()' /usr/bin/ld: flcallback.cc:(.text+0x201): undefined reference to `Fl_Menu_::menu(Fl_Menu_Item const*)' /usr/bin/ld: flcallback.cc:(.text+0x20f): undefined reference to `Fl_Widget::redraw()' /usr/bin/ld: flcallback.cc:(.text+0x21d): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.cc:(.text+0x24a): undefined reference to `Fl_Menu_::clear()' /usr/bin/ld: flcallback.cc:(.text+0x261): undefined reference to `Fl_Menu_::menu(Fl_Menu_Item const*)' /usr/bin/ld: flcallback.cc:(.text+0x26f): undefined reference to `Fl_Widget::redraw()' /usr/bin/ld: flcallback.cc:(.text+0x27d): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.o: in function `cb_phyml_browse(Fl_Widget*, void*)': flcallback.cc:(.text+0x2b0): undefined reference to `Fl_File_Chooser::show()' /usr/bin/ld: flcallback.cc:(.text+0x2c1): undefined reference to `Fl::check()' /usr/bin/ld: flcallback.cc:(.text+0x2cc): undefined reference to `Fl_File_Chooser::visible()' /usr/bin/ld: flcallback.cc:(.text+0x2e4): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.cc:(.text+0x302): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.cc:(.text+0x30e): undefined reference to `Fl_Input_::value(char const*)' /usr/bin/ld: flcallback.o: in function `cb_phyml_tree(Fl_Widget*, void*)': flcallback.cc:(.text+0x341): undefined reference to `fl_ask(char const*, ...)' /usr/bin/ld: flcallback.o: in function `cb_build(Fl_Widget*, void*)': flcallback.cc:(.text+0x41e): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.cc:(.text+0x441): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.o: in function `cb_prev(Fl_Widget*, void*)': flcallback.cc:(.text+0x695): undefined reference to `Fl_Tabs::value(Fl_Widget*)' /usr/bin/ld: flcallback.o: in function `cb_next(Fl_Widget*, void*)': flcallback.cc:(.text+0x6e5): undefined reference to `Fl_Tabs::value(Fl_Widget*)' /usr/bin/ld: flcallback.o: in function `cb_update_buttons(Fl_Widget*, void*)': flcallback.cc:(.text+0x71e): undefined reference to `Fl_Tabs::value()' /usr/bin/ld: flcallback.cc:(.text+0x733): undefined reference to `Fl_Tabs::value()' /usr/bin/ld: flcallback.cc:(.text+0x75b): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.cc:(.text+0x766): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.cc:(.text+0x774): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.cc:(.text+0x77f): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.cc:(.text+0x78a): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.o:flcallback.cc:(.text+0x798): more undefined references to `Fl_Widget::activate()' follow /usr/bin/ld: flcallback.o: in function `cb_update_buttons(Fl_Widget*, void*)': flcallback.cc:(.text+0x7ad): undefined reference to `Fl_Button::value(int)' /usr/bin/ld: flcallback.cc:(.text+0x7c2): undefined reference to `Fl_Button::value(int)' /usr/bin/ld: flcallback.cc:(.text+0x7d9): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.cc:(.text+0x7e4): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.cc:(.text+0x7f2): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.cc:(.text+0x7fd): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.cc:(.text+0x808): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.o:flcallback.cc:(.text+0x816): more undefined references to `Fl_Widget::deactivate()' follow /usr/bin/ld: flcallback.o: in function `cb_open(Fl_Widget*, void*)': flcallback.cc:(.text+0x840): undefined reference to `Fl_File_Chooser::show()' /usr/bin/ld: flcallback.cc:(.text+0x851): undefined reference to `Fl::check()' /usr/bin/ld: flcallback.cc:(.text+0x85c): undefined reference to `Fl_File_Chooser::visible()' /usr/bin/ld: flcallback.cc:(.text+0x874): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.cc:(.text+0x88c): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.o: in function `cb_save(Fl_Widget*, void*)': flcallback.cc:(.text+0x900): undefined reference to `Fl_File_Chooser::show()' /usr/bin/ld: flcallback.cc:(.text+0x911): undefined reference to `Fl::check()' /usr/bin/ld: flcallback.cc:(.text+0x91c): undefined reference to `Fl_File_Chooser::visible()' /usr/bin/ld: flcallback.cc:(.text+0x934): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.cc:(.text+0x956): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.o: in function `cb_expt(Fl_Widget*, void*)': flcallback.cc:(.text+0x990): undefined reference to `Fl_File_Chooser::show()' /usr/bin/ld: flcallback.cc:(.text+0x9a1): undefined reference to `Fl::check()' /usr/bin/ld: flcallback.cc:(.text+0x9ac): undefined reference to `Fl_File_Chooser::visible()' /usr/bin/ld: flcallback.cc:(.text+0x9c4): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.cc:(.text+0x9e6): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.o: in function `cb_browse(Fl_Widget*, void*)': flcallback.cc:(.text+0xa60): undefined reference to `Fl_File_Chooser::show()' /usr/bin/ld: flcallback.cc:(.text+0xa71): undefined reference to `Fl::check()' /usr/bin/ld: flcallback.cc:(.text+0xa7c): undefined reference to `Fl_File_Chooser::visible()' /usr/bin/ld: flcallback.cc:(.text+0xa94): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.cc:(.text+0xab2): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.cc:(.text+0xabe): undefined reference to `Fl_Input_::value(char const*)' /usr/bin/ld: flcallback.o: in function `cb_browse_aa_aln(Fl_Widget*, void*)': flcallback.cc:(.text+0xaf0): undefined reference to `Fl_File_Chooser::show()' /usr/bin/ld: flcallback.cc:(.text+0xb01): undefined reference to `Fl::check()' /usr/bin/ld: flcallback.cc:(.text+0xb0c): undefined reference to `Fl_File_Chooser::visible()' /usr/bin/ld: flcallback.cc:(.text+0xb24): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.cc:(.text+0xb42): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.cc:(.text+0xb4e): undefined reference to `Fl_Input_::value(char const*)' /usr/bin/ld: flcallback.o: in function `cb_browse_nt_seq(Fl_Widget*, void*)': flcallback.cc:(.text+0xb80): undefined reference to `Fl_File_Chooser::show()' /usr/bin/ld: flcallback.cc:(.text+0xb91): undefined reference to `Fl::check()' /usr/bin/ld: flcallback.cc:(.text+0xb9c): undefined reference to `Fl_File_Chooser::visible()' /usr/bin/ld: flcallback.cc:(.text+0xbb4): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.cc:(.text+0xbd2): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.cc:(.text+0xbde): undefined reference to `Fl_Input_::value(char const*)' /usr/bin/ld: flcallback.o: in function `cb_browse_nt_aln(Fl_Widget*, void*)': flcallback.cc:(.text+0xc10): undefined reference to `Fl_File_Chooser::show()' /usr/bin/ld: flcallback.cc:(.text+0xc21): undefined reference to `Fl::check()' /usr/bin/ld: flcallback.cc:(.text+0xc2c): undefined reference to `Fl_File_Chooser::visible()' /usr/bin/ld: flcallback.cc:(.text+0xc44): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.cc:(.text+0xc62): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.cc:(.text+0xc6e): undefined reference to `Fl_Input_::value(char const*)' /usr/bin/ld: flcallback.o: in function `cb_type(Fl_Widget*, void*)': flcallback.cc:(.text+0xcca): undefined reference to `Fl_Menu_::clear()' /usr/bin/ld: flcallback.cc:(.text+0xce1): undefined reference to `Fl_Menu_::menu(Fl_Menu_Item const*)' /usr/bin/ld: flcallback.cc:(.text+0xd0a): undefined reference to `Fl_Menu_::clear()' /usr/bin/ld: flcallback.o: in function `cb_phyml_inv(Fl_Widget*, void*)': flcallback.cc:(.text+0x78): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.cc:(.text+0x81): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.o: in function `cb_phyml_alpha(Fl_Widget*, void*)': flcallback.cc:(.text+0xa8): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.cc:(.text+0xb1): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.o: in function `cb_phyml_has_tree(Fl_Widget*, void*)': flcallback.cc:(.text+0xd8): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.cc:(.text+0xe1): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.o: in function `cb_phyml_tstv(Fl_Widget*, void*)': flcallback.cc:(.text+0x108): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.cc:(.text+0x111): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.o: in function `cb_phyml_n_cat(Fl_Widget*, void*)': flcallback.cc:(.text+0x17f): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.cc:(.text+0x19f): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.o: in function `cb_phyml_type(Fl_Widget*, void*)': flcallback.cc:(.text+0x23c): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.cc:(.text+0x293): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.o: in function `cb_phyml_browse(Fl_Widget*, void*)': flcallback.cc:(.text+0x322): undefined reference to `Fl_Widget::redraw()' /usr/bin/ld: flcallback.o: in function `cb_phyml_tree(Fl_Widget*, void*)': flcallback.cc:(.text+0x3bd): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.cc:(.text+0x3e3): undefined reference to `fl_alert(char const*, ...)' /usr/bin/ld: flcallback.o: in function `cb_build_tree(Fl_Widget*, void*)': flcallback.cc:(.text+0x549): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.cc:(.text+0x563): undefined reference to `fl_alert(char const*, ...)' /usr/bin/ld: flcallback.o: in function `cb_toggle_cons(Fl_Widget*, void*)': flcallback.cc:(.text+0x588): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.cc:(.text+0x591): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.o: in function `cb_prev(Fl_Widget*, void*)': flcallback.cc:(.text+0x6a5): undefined reference to `Fl::flush()' /usr/bin/ld: flcallback.o: in function `cb_next(Fl_Widget*, void*)': flcallback.cc:(.text+0x6f5): undefined reference to `Fl::flush()' /usr/bin/ld: flcallback.o: in function `cb_update_buttons(Fl_Widget*, void*)': flcallback.cc:(.text+0x7cd): undefined reference to `Fl::flush()' /usr/bin/ld: flcallback.o: in function `cb_browse(Fl_Widget*, void*)': flcallback.cc:(.text+0xad2): undefined reference to `Fl_Widget::redraw()' /usr/bin/ld: flcallback.o: in function `cb_browse_aa_aln(Fl_Widget*, void*)': flcallback.cc:(.text+0xb62): undefined reference to `Fl_Widget::redraw()' /usr/bin/ld: flcallback.o: in function `cb_browse_nt_seq(Fl_Widget*, void*)': flcallback.cc:(.text+0xbf2): undefined reference to `Fl_Widget::redraw()' /usr/bin/ld: flcallback.o: in function `cb_browse_nt_aln(Fl_Widget*, void*)': flcallback.cc:(.text+0xc82): undefined reference to `Fl_Widget::redraw()' /usr/bin/ld: flcallback.o: in function `cb_type(Fl_Widget*, void*)': flcallback.cc:(.text+0xcf7): undefined reference to `Fl_Widget::redraw()' collect2: error: ld returned 1 exit status install: cannot stat 'fltreebest': No such file or directory fakeroot -- sh treebest-ensembl.SlackBuild Failed