CMake Deprecation Warning at CMakeLists.txt:3 (cmake_minimum_required): Compatibility with CMake < 2.8.12 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at CMakeLists.txt:16 (cmake_policy): The OLD behavior for policy CMP0005 will be removed from a future version of CMake. The cmake-policies(7) manual explains that the OLD behaviors of all policies are deprecated and that a policy should be set to OLD only under specific short-term circumstances. Projects should be ported to the NEW behavior and not rely on setting a policy to OLD. CMake Deprecation Warning at CMakeLists.txt:18 (cmake_policy): The OLD behavior for policy CMP0042 will be removed from a future version of CMake. 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/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/bitvec.cpp: In member function ‘int OpenBabel::OBBitVec::NextBit(int) const’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/bitvec.cpp:69:17: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 69 | {register int m; \ | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/bitvec.cpp:234:13: note: in expansion of macro ‘LowBit’ 234 | LowBit(s,bit); | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/bitvec.cpp:69:17: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 69 | {register int m; \ | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/bitvec.cpp:246:13: note: in expansion of macro ‘LowBit’ 246 | LowBit(s, bit); | ^~~~~~ [ 1%] Building CXX object src/CMakeFiles/openbabel.dir/bond.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && 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/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/descriptor.o -MF CMakeFiles/openbabel.dir/descriptor.o.d -o CMakeFiles/openbabel.dir/descriptor.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/descriptor.cpp [ 3%] Building CXX object 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/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprint.cpp: In member function ‘bool OpenBabel::FastSearch::Find(OpenBabel::OBBase*, std::vector&, unsigned int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprint.cpp:149:28: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 149 | register unsigned int* p; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprint.cpp:150:28: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 150 | register unsigned int* ppat; | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprint.cpp:151:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 151 | register unsigned int a; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprint.cpp: In member function ‘bool OpenBabel::FastSearch::FindMatch(OpenBabel::OBBase*, std::vector&, unsigned int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprint.cpp:200:26: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 200 | register unsigned int* p; // current position in index | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprint.cpp:201:26: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 201 | register unsigned int* ppat; // current position in target FP | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprint.cpp: In member function ‘bool OpenBabel::FastSearch::FindSimilar(OpenBabel::OBBase*, std::multimap&, double, double)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprint.cpp:237:28: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 237 | register unsigned int* p; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprint.cpp:238:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 238 | register unsigned int i; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprint.cpp: In member function ‘bool OpenBabel::FastSearch::FindSimilar(OpenBabel::OBBase*, std::multimap&, int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprint.cpp:272:28: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 272 | register unsigned int* p; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprint.cpp:273:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 273 | register unsigned int i; | ^ [ 3%] Building CXX object src/CMakeFiles/openbabel.dir/forcefield.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN 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/usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/obutil.o -MF CMakeFiles/openbabel.dir/obutil.o.d -o CMakeFiles/openbabel.dir/obutil.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp: In function ‘void OpenBabel::qtrfit(double*, double*, int, double (*)[3])’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp:683:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 683 | register int i; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp: In function ‘int OpenBabel::SolveQuadratic(double, double, double)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp:796:21: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 796 | register double Descr, Temp, TwoA; | ^~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp:796:28: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 796 | register double Descr, Temp, TwoA; | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp:796:34: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 796 | register double Descr, Temp, TwoA; | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp: In function ‘int OpenBabel::SolveCubic(double, double, double, double)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp:841:21: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 841 | register double TwoA, ThreeA, BOver3A; | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp:841:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 841 | register double TwoA, ThreeA, BOver3A; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp:841:35: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 841 | register double TwoA, ThreeA, BOver3A; | ^~~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp:842:21: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 842 | register double Temp, POver3, QOver2; | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp:842:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 842 | register double Temp, POver3, QOver2; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp:842:35: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 842 | register double Temp, POver3, QOver2; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp:843:21: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 843 | register double Desc, Rho, Psi; | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp:843:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 843 | register double Desc, Rho, Psi; | ^~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp:843:32: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 843 | register double Desc, Rho, Psi; | ^~~ [ 6%] Building CXX object src/CMakeFiles/openbabel.dir/op.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/op.o -MF CMakeFiles/openbabel.dir/op.o.d -o CMakeFiles/openbabel.dir/op.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/op.cpp [ 7%] Building CXX object src/CMakeFiles/openbabel.dir/parsmart.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/parsmart.o -MF CMakeFiles/openbabel.dir/parsmart.o.d -o CMakeFiles/openbabel.dir/parsmart.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In function ‘OpenBabel::AtomExpr* OpenBabel::CopyAtomExpr(OpenBabel::AtomExpr*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:177:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 177 | register AtomExpr *result; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In function ‘OpenBabel::AtomExpr* OpenBabel::BuildAtomPred(int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:233:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 233 | register AtomExpr *result; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In function ‘OpenBabel::AtomExpr* OpenBabel::BuildAtomLeaf(int, int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:243:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 243 | register AtomExpr *result; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In function ‘OpenBabel::AtomExpr* OpenBabel::BuildAtomNot(OpenBabel::AtomExpr*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:253:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 253 | register AtomExpr *result; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In function ‘OpenBabel::AtomExpr* OpenBabel::BuildAtomBin(int, OpenBabel::AtomExpr*, OpenBabel::AtomExpr*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:263:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 263 | register AtomExpr *result; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In function ‘OpenBabel::AtomExpr* OpenBabel::BuildAtomRecurs(OpenBabel::Pattern*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:274:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 274 | register AtomExpr *result; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In function ‘OpenBabel::BondExpr* OpenBabel::CopyBondExpr(OpenBabel::BondExpr*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:304:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 304 | register BondExpr *result; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In function ‘OpenBabel::BondExpr* OpenBabel::BuildBondLeaf(int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:387:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 387 | register BondExpr *result; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In function ‘OpenBabel::BondExpr* OpenBabel::BuildBondNot(OpenBabel::BondExpr*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:396:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 396 | register BondExpr *result; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In function ‘OpenBabel::BondExpr* OpenBabel::BuildBondBin(int, OpenBabel::BondExpr*, OpenBabel::BondExpr*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:406:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 406 | register BondExpr *result; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In member function ‘OpenBabel::AtomExpr* OpenBabel::OBSmartsPattern::ParseComplexAtomPrimitive()’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:646:23: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 646 | register Pattern *pat; | ^~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:647:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 647 | register int index; | ^~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In member function ‘OpenBabel::AtomExpr* OpenBabel::OBSmartsPattern::ParseAtomExpr(int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:1166:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 1166 | register AtomExpr *expr1 = NULL; | ^~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:1167:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 1167 | register AtomExpr *expr2 = NULL; | ^~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:1168:20: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 1168 | register char *prev; | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In member function ‘OpenBabel::BondExpr* OpenBabel::OBSmartsPattern::ParseBondExpr(int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:1266:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 1266 | register BondExpr *expr1 = NULL; | ^~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:1267:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 1267 | register BondExpr *expr2 = NULL; | ^~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:1268:20: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 1268 | register char *prev; | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In member function ‘OpenBabel::Pattern* OpenBabel::OBSmartsPattern::SMARTSParser(OpenBabel::Pattern*, OpenBabel::ParseState*, int, int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:1367:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 1367 | register AtomExpr *aexpr; | ^~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:1368:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 1368 | register BondExpr *bexpr; | ^~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:1369:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 1369 | register int index; | ^~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In member function ‘OpenBabel::Pattern* OpenBabel::OBSmartsPattern::ParseSMARTSString(char*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:1682:23: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 1682 | register Pattern *result; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In member function ‘OpenBabel::Pattern* OpenBabel::OBSmartsPattern::ParseSMARTSRecord(char*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:1696:20: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 1696 | register char *src; | ^~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In function ‘OpenBabel::AtomExpr* OpenBabel::NotAtomExpr(OpenBabel::AtomExpr*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:1718:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 1718 | register AtomExpr *result; | ^~~~~~ [ 7%] Building CXX object src/CMakeFiles/openbabel.dir/patty.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/patty.o -MF CMakeFiles/openbabel.dir/patty.o.d -o CMakeFiles/openbabel.dir/patty.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/patty.cpp [ 7%] Building CXX object src/CMakeFiles/openbabel.dir/phmodel.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/phmodel.o -MF CMakeFiles/openbabel.dir/phmodel.o.d -o CMakeFiles/openbabel.dir/phmodel.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/phmodel.cpp [ 7%] Building CXX object src/CMakeFiles/openbabel.dir/plugin.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/plugin.o -MF CMakeFiles/openbabel.dir/plugin.o.d -o CMakeFiles/openbabel.dir/plugin.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/plugin.cpp [ 7%] Building CXX object src/CMakeFiles/openbabel.dir/pointgroup.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/pointgroup.o -MF CMakeFiles/openbabel.dir/pointgroup.o.d -o CMakeFiles/openbabel.dir/pointgroup.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/pointgroup.cpp [ 8%] Building CXX object src/CMakeFiles/openbabel.dir/query.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/query.o -MF CMakeFiles/openbabel.dir/query.o.d -o CMakeFiles/openbabel.dir/query.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/query.cpp [ 8%] Building CXX object src/CMakeFiles/openbabel.dir/rand.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/rand.o -MF CMakeFiles/openbabel.dir/rand.o.d -o CMakeFiles/openbabel.dir/rand.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp: In function ‘unsigned int OpenBabel::isqrt(unsigned int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:96:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 96 | register unsigned int temp; | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:97:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 97 | register unsigned int rem; | ^~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:98:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 98 | register int i,result; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:98:20: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 98 | register int i,result; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp: In function ‘int OpenBabel::IsOddPrime(unsigned int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:136:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 136 | register unsigned int root; | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:137:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 137 | register unsigned int i; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp: In function ‘void OpenBabel::DoubleMultiply(unsigned int, unsigned int, OpenBabel::DoubleType*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:204:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 204 | register unsigned int x0, x1, x2, x3; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:204:31: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 204 | register unsigned int x0, x1, x2, x3; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:204:35: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 204 | register unsigned int x0, x1, x2, x3; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:204:39: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 204 | register unsigned int x0, x1, x2, x3; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:205:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 205 | register unsigned int hx, lx; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:205:31: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 205 | register unsigned int hx, lx; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:206:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 206 | register unsigned int hy, ly; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:206:31: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 206 | register unsigned int hy, ly; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp: In function ‘unsigned int OpenBabel::DoubleModulus(OpenBabel::DoubleType*, unsigned int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:259:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 259 | register unsigned int d1, d0; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:259:31: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 259 | register unsigned int d1, d0; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:260:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 260 | register unsigned int r1, r0; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:260:31: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 260 | register unsigned int r1, r0; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:261:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 261 | register unsigned int m,s; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:261:29: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 261 | register unsigned int m,s; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp: In function ‘int OpenBabel::DeterminePotency(unsigned int, unsigned int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:300:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 300 | register unsigned int k; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:301:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 301 | register unsigned int b; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:302:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 302 | register int s; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp: In function ‘int OpenBabel::DetermineFactors(unsigned int, unsigned int*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:318:28: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 318 | register unsigned int *ptr; | ^~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:319:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 319 | register unsigned int half; | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:320:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 320 | register unsigned int i; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp: In function ‘unsigned int OpenBabel::DetermineIncrement(unsigned int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:340:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 340 | register unsigned int hi,lo; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:340:30: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 340 | register unsigned int hi,lo; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:341:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 341 | register unsigned int half; | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:342:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 342 | register unsigned int i; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp: In function ‘int OpenBabel::DetermineSequence(unsigned int, unsigned int*, unsigned int*, unsigned int*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:374:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 374 | register unsigned int a=0, c; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:374:32: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 374 | register unsigned int a=0, c; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:375:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 375 | register unsigned int b; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:376:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 376 | register int pot,best; | ^~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:376:22: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 376 | register int pot,best; | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:377:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 377 | register int count; | ^~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:378:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 378 | register int flag; | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:379:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 379 | register int i; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp: In function ‘void OpenBabel::GenerateSequence(unsigned int, unsigned int, unsigned int, unsigned int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:431:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 431 | register unsigned int i; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:432:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 432 | register unsigned int x; | ^ [ 8%] Building CXX object src/CMakeFiles/openbabel.dir/residue.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/residue.o -MF CMakeFiles/openbabel.dir/residue.o.d -o CMakeFiles/openbabel.dir/residue.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/residue.cpp [ 8%] Building CXX object src/CMakeFiles/openbabel.dir/ring.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/ring.o -MF CMakeFiles/openbabel.dir/ring.o.d -o CMakeFiles/openbabel.dir/ring.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ring.cpp [ 8%] Building CXX object src/CMakeFiles/openbabel.dir/rotamer.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/rotamer.o -MF CMakeFiles/openbabel.dir/rotamer.o.d -o CMakeFiles/openbabel.dir/rotamer.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rotamer.cpp [ 9%] Building CXX object src/CMakeFiles/openbabel.dir/rotor.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/rotor.o -MF CMakeFiles/openbabel.dir/rotor.o.d -o CMakeFiles/openbabel.dir/rotor.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rotor.cpp [ 9%] Building CXX object src/CMakeFiles/openbabel.dir/spectrophore.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/spectrophore.o -MF CMakeFiles/openbabel.dir/spectrophore.o.d -o CMakeFiles/openbabel.dir/spectrophore.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/spectrophore.cpp [ 9%] Building CXX object src/CMakeFiles/openbabel.dir/tautomer.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/tautomer.o -MF CMakeFiles/openbabel.dir/tautomer.o.d -o CMakeFiles/openbabel.dir/tautomer.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/tautomer.cpp [ 9%] Building CXX object src/CMakeFiles/openbabel.dir/tokenst.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/tokenst.o -MF CMakeFiles/openbabel.dir/tokenst.o.d -o CMakeFiles/openbabel.dir/tokenst.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/tokenst.cpp [ 9%] Building CXX object src/CMakeFiles/openbabel.dir/transform.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/transform.o -MF CMakeFiles/openbabel.dir/transform.o.d -o CMakeFiles/openbabel.dir/transform.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/transform.cpp [ 10%] Building CXX object src/CMakeFiles/openbabel.dir/typer.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/typer.o -MF CMakeFiles/openbabel.dir/typer.o.d -o CMakeFiles/openbabel.dir/typer.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/typer.cpp [ 10%] Building CXX object src/CMakeFiles/openbabel.dir/obmolecformat.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/obmolecformat.o -MF CMakeFiles/openbabel.dir/obmolecformat.o.d -o CMakeFiles/openbabel.dir/obmolecformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obmolecformat.cpp [ 10%] Building CXX object src/CMakeFiles/openbabel.dir/conformersearch.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/conformersearch.o -MF CMakeFiles/openbabel.dir/conformersearch.o.d -o CMakeFiles/openbabel.dir/conformersearch.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/conformersearch.cpp [ 10%] Building CXX object src/CMakeFiles/openbabel.dir/confsearch.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/confsearch.o -MF CMakeFiles/openbabel.dir/confsearch.o.d -o CMakeFiles/openbabel.dir/confsearch.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/confsearch.cpp [ 10%] Building CXX object src/CMakeFiles/openbabel.dir/distgeom.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/distgeom.o -MF CMakeFiles/openbabel.dir/distgeom.o.d -o CMakeFiles/openbabel.dir/distgeom.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/distgeom.cpp [ 10%] Building CXX object src/CMakeFiles/openbabel.dir/dlhandler_unix.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/dlhandler_unix.o -MF CMakeFiles/openbabel.dir/dlhandler_unix.o.d -o CMakeFiles/openbabel.dir/dlhandler_unix.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/dlhandler_unix.cpp [ 11%] Building CXX object src/CMakeFiles/openbabel.dir/depict/depict.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/depict/depict.o -MF CMakeFiles/openbabel.dir/depict/depict.o.d -o CMakeFiles/openbabel.dir/depict/depict.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/depict/depict.cpp [ 11%] Building CXX object src/CMakeFiles/openbabel.dir/depict/svgpainter.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/depict/svgpainter.o -MF CMakeFiles/openbabel.dir/depict/svgpainter.o.d -o CMakeFiles/openbabel.dir/depict/svgpainter.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/depict/svgpainter.cpp [ 11%] Building CXX object src/CMakeFiles/openbabel.dir/math/matrix3x3.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/math/matrix3x3.o -MF CMakeFiles/openbabel.dir/math/matrix3x3.o.d -o CMakeFiles/openbabel.dir/math/matrix3x3.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/math/matrix3x3.cpp /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/math/matrix3x3.cpp: In static member function ‘static void OpenBabel::matrix3x3::jacobi(unsigned int, double*, double*, double*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/math/matrix3x3.cpp:566:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 566 | register int i, j, k, l; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/math/matrix3x3.cpp:566:21: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 566 | register int i, j, k, l; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/math/matrix3x3.cpp:566:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 566 | register int i, j, k, l; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/math/matrix3x3.cpp:566:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 566 | register int i, j, k, l; | ^ [ 11%] Building CXX object src/CMakeFiles/openbabel.dir/math/spacegroup.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/math/spacegroup.o -MF CMakeFiles/openbabel.dir/math/spacegroup.o.d -o CMakeFiles/openbabel.dir/math/spacegroup.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/math/spacegroup.cpp [ 11%] Building CXX object 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/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/math/transform3d.cpp [ 12%] Building CXX object src/CMakeFiles/openbabel.dir/math/vector3.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/math/vector3.o -MF CMakeFiles/openbabel.dir/math/vector3.o.d -o 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src/CMakeFiles/openbabel.dir/stereo/stereo.o -MF CMakeFiles/openbabel.dir/stereo/stereo.o.d -o CMakeFiles/openbabel.dir/stereo/stereo.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/stereo/stereo.cpp [ 12%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/tetranonplanar.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC 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-mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/stereo/tetraplanar.o -MF CMakeFiles/openbabel.dir/stereo/tetraplanar.o.d -o CMakeFiles/openbabel.dir/stereo/tetraplanar.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/stereo/tetraplanar.cpp [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/squareplanar.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/stereo/squareplanar.o -MF CMakeFiles/openbabel.dir/stereo/squareplanar.o.d -o CMakeFiles/openbabel.dir/stereo/squareplanar.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/stereo/squareplanar.cpp [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/cistrans.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/stereo/cistrans.o -MF CMakeFiles/openbabel.dir/stereo/cistrans.o.d -o CMakeFiles/openbabel.dir/stereo/cistrans.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/stereo/cistrans.cpp [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/tetrahedral.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/stereo/tetrahedral.o -MF CMakeFiles/openbabel.dir/stereo/tetrahedral.o.d -o CMakeFiles/openbabel.dir/stereo/tetrahedral.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/stereo/tetrahedral.cpp [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/perception.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/stereo/perception.o -MF CMakeFiles/openbabel.dir/stereo/perception.o.d -o CMakeFiles/openbabel.dir/stereo/perception.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/stereo/perception.cpp /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/stereo/perception.cpp: In function ‘void OpenBabel::StereoRefToImplicit(OpenBabel::OBMol&, OpenBabel::OBStereo::Ref)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/stereo/perception.cpp:2871:16: warning: ‘template class std::binder1st’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 2871 | const std::binder1st > equal_to_atomId = std::bind1st (equal_to(), atomId); | ^~~~~~~~~ In file included from /usr/include/c++/11.2.0/bits/stl_function.h:1407, from /usr/include/c++/11.2.0/bits/stl_tree.h:65, from /usr/include/c++/11.2.0/map:60, from /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/openbabel/base.h:26, from /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/openbabel/stereo/stereo.h:27, from /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/openbabel/stereo/tetranonplanar.h:27, from /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/openbabel/stereo/tetrahedral.h:27, from /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/stereo/perception.cpp:25: /usr/include/c++/11.2.0/backward/binders.h:108:11: note: declared here 108 | class binder1st | ^~~~~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/stereo/perception.cpp: In function ‘void OpenBabel::ImplicitRefToStereo(OpenBabel::OBMol&, OpenBabel::OBStereo::Ref, OpenBabel::OBStereo::Ref)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/stereo/perception.cpp:2903:16: warning: ‘template class std::binder1st’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 2903 | const std::binder1st > equal_to_implicitRef = std::bind1st (equal_to(), (OBStereo::Ref) OBStereo::ImplicitRef); | ^~~~~~~~~ In file included from /usr/include/c++/11.2.0/bits/stl_function.h:1407, from /usr/include/c++/11.2.0/bits/stl_tree.h:65, from /usr/include/c++/11.2.0/map:60, from /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/openbabel/base.h:26, from /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/openbabel/stereo/stereo.h:27, from /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/openbabel/stereo/tetranonplanar.h:27, from /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/openbabel/stereo/tetrahedral.h:27, from /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/stereo/perception.cpp:25: /usr/include/c++/11.2.0/backward/binders.h:108:11: note: declared here 108 | class binder1st | ^~~~~~~~~ [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/facade.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/stereo/facade.o -MF CMakeFiles/openbabel.dir/stereo/facade.o.d -o CMakeFiles/openbabel.dir/stereo/facade.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/stereo/facade.cpp [ 14%] Linking CXX shared library ../lib/libopenbabel.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/openbabel.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -Wl,-soname,libopenbabel.so.5 -o ../lib/libopenbabel.so.5.0.0 CMakeFiles/openbabel.dir/alias.o CMakeFiles/openbabel.dir/atom.o CMakeFiles/openbabel.dir/base.o CMakeFiles/openbabel.dir/bitvec.o CMakeFiles/openbabel.dir/bond.o CMakeFiles/openbabel.dir/bondtyper.o CMakeFiles/openbabel.dir/builder.o CMakeFiles/openbabel.dir/canon.o CMakeFiles/openbabel.dir/chains.o CMakeFiles/openbabel.dir/chargemodel.o CMakeFiles/openbabel.dir/chiral.o CMakeFiles/openbabel.dir/data.o CMakeFiles/openbabel.dir/data_utilities.o CMakeFiles/openbabel.dir/descriptor.o CMakeFiles/openbabel.dir/fingerprint.o CMakeFiles/openbabel.dir/forcefield.o CMakeFiles/openbabel.dir/format.o CMakeFiles/openbabel.dir/generic.o CMakeFiles/openbabel.dir/graphsym.o CMakeFiles/openbabel.dir/grid.o CMakeFiles/openbabel.dir/griddata.o CMakeFiles/openbabel.dir/isomorphism.o CMakeFiles/openbabel.dir/kekulize.o CMakeFiles/openbabel.dir/locale.o CMakeFiles/openbabel.dir/matrix.o CMakeFiles/openbabel.dir/mcdlutil.o CMakeFiles/openbabel.dir/molchrg.o CMakeFiles/openbabel.dir/mol.o CMakeFiles/openbabel.dir/obconversion.o CMakeFiles/openbabel.dir/oberror.o 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CMakeFiles/openbabel.dir/math/spacegroup.o CMakeFiles/openbabel.dir/math/transform3d.o CMakeFiles/openbabel.dir/math/vector3.o CMakeFiles/openbabel.dir/math/align.o CMakeFiles/openbabel.dir/stereo/stereo.o CMakeFiles/openbabel.dir/stereo/tetranonplanar.o CMakeFiles/openbabel.dir/stereo/tetraplanar.o CMakeFiles/openbabel.dir/stereo/squareplanar.o CMakeFiles/openbabel.dir/stereo/cistrans.o CMakeFiles/openbabel.dir/stereo/tetrahedral.o CMakeFiles/openbabel.dir/stereo/perception.o CMakeFiles/openbabel.dir/stereo/facade.o -Wl,-rpath,:::::::: -lm -ldl -lz cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/cmake -E cmake_symlink_library ../lib/libopenbabel.so.5.0.0 ../lib/libopenbabel.so.5 ../lib/libopenbabel.so make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 14%] Built target openbabel make -f src/CMakeFiles/plugin_charges.dir/build.make src/CMakeFiles/plugin_charges.dir/depend make[2]: Entering 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src/CMakeFiles/plugin_charges.dir/charges/mmff94.o -MF CMakeFiles/plugin_charges.dir/charges/mmff94.o.d -o CMakeFiles/plugin_charges.dir/charges/mmff94.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/charges/mmff94.cpp [ 15%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/fromfile.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_charges_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 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-O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_charges.dir/charges/eqeq.o -MF CMakeFiles/plugin_charges.dir/charges/eqeq.o.d -o CMakeFiles/plugin_charges.dir/charges/eqeq.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/charges/eqeq.cpp [ 16%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/qeq.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_charges_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_charges.dir/charges/qeq.o -MF CMakeFiles/plugin_charges.dir/charges/qeq.o.d -o CMakeFiles/plugin_charges.dir/charges/qeq.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/charges/qeq.cpp [ 16%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/qtpie.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_charges_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_charges.dir/charges/qtpie.o -MF CMakeFiles/plugin_charges.dir/charges/qtpie.o.d -o CMakeFiles/plugin_charges.dir/charges/qtpie.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/charges/qtpie.cpp [ 16%] Linking CXX shared module ../lib/plugin_charges.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_charges.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../lib/plugin_charges.so CMakeFiles/plugin_charges.dir/charges/eem.o CMakeFiles/plugin_charges.dir/charges/gasteiger.o CMakeFiles/plugin_charges.dir/charges/none.o CMakeFiles/plugin_charges.dir/charges/mmff94.o CMakeFiles/plugin_charges.dir/charges/fromfile.o CMakeFiles/plugin_charges.dir/charges/eqeq.o CMakeFiles/plugin_charges.dir/charges/qeq.o CMakeFiles/plugin_charges.dir/charges/qtpie.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib: -lm -ldl -lz ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 16%] Built target plugin_charges make -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/CMakeFiles/plugin_forcefields.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 17%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS 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src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.o -MF CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.o.d -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/forcefields/forcefieldmmff94.cpp [ 17%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.o -MF CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.o.d -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/forcefields/forcefielduff.cpp [ 17%] Linking CXX shared module ../lib/plugin_forcefields.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_forcefields.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../lib/plugin_forcefields.so CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.o CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib: -lm -ldl -lz ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 17%] Built target plugin_forcefields make -f src/CMakeFiles/plugin_fingerprints.dir/build.make src/CMakeFiles/plugin_fingerprints.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/CMakeFiles/plugin_fingerprints.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/CMakeFiles/plugin_fingerprints.dir/build.make src/CMakeFiles/plugin_fingerprints.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 17%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_fingerprints_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.o -MF CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.o.d -o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprints/finger2.cpp [ 17%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_fingerprints_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.o -MF CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.o.d -o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprints/finger3.cpp [ 17%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_fingerprints_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.o -MF CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.o.d -o CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprints/fingerecfp.cpp [ 17%] Linking CXX shared module ../lib/plugin_fingerprints.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_fingerprints.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../lib/plugin_fingerprints.so CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.o CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib: -lm -ldl -lz ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 17%] Built target plugin_fingerprints make -f src/CMakeFiles/plugin_descriptors.dir/build.make src/CMakeFiles/plugin_descriptors.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/CMakeFiles/plugin_descriptors.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/CMakeFiles/plugin_descriptors.dir/build.make src/CMakeFiles/plugin_descriptors.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 17%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.o -MF 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/usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.o -MF CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.o.d -o CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/descriptors/groupcontrib.cpp [ 18%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/filters.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_descriptors.dir/descriptors/filters.o -MF CMakeFiles/plugin_descriptors.dir/descriptors/filters.o.d -o CMakeFiles/plugin_descriptors.dir/descriptors/filters.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/descriptors/filters.cpp [ 18%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.o -MF CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.o.d -o CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/descriptors/inchidescriptor.cpp [ 18%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && 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shared module ../lib/plugin_descriptors.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_descriptors.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../lib/plugin_descriptors.so CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.o CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.o CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.o CMakeFiles/plugin_descriptors.dir/descriptors/filters.o CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.o CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib: -lm -ldl -lz ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 19%] Built target plugin_descriptors make -f src/CMakeFiles/plugin_ops.dir/build.make src/CMakeFiles/plugin_ops.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/CMakeFiles/plugin_ops.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/CMakeFiles/plugin_ops.dir/build.make 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src/CMakeFiles/plugin_ops.dir/ops/addinindex.o -MF CMakeFiles/plugin_ops.dir/ops/addinindex.o.d -o CMakeFiles/plugin_ops.dir/ops/addinindex.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/addinindex.cpp [ 20%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addpolarh.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/addpolarh.o -MF CMakeFiles/plugin_ops.dir/ops/addpolarh.o.d -o CMakeFiles/plugin_ops.dir/ops/addpolarh.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/addpolarh.cpp [ 20%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addnonpolarh.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/addnonpolarh.o -MF CMakeFiles/plugin_ops.dir/ops/addnonpolarh.o.d -o CMakeFiles/plugin_ops.dir/ops/addnonpolarh.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/addnonpolarh.cpp [ 20%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/canonical.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/canonical.o -MF CMakeFiles/plugin_ops.dir/ops/canonical.o.d -o CMakeFiles/plugin_ops.dir/ops/canonical.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/canonical.cpp [ 20%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/changecell.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/changecell.o -MF CMakeFiles/plugin_ops.dir/ops/changecell.o.d -o CMakeFiles/plugin_ops.dir/ops/changecell.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/changecell.cpp [ 21%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/delpolarh.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/delpolarh.o -MF CMakeFiles/plugin_ops.dir/ops/delpolarh.o.d -o CMakeFiles/plugin_ops.dir/ops/delpolarh.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/delpolarh.cpp [ 21%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/delnonpolarh.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/delnonpolarh.o -MF CMakeFiles/plugin_ops.dir/ops/delnonpolarh.o.d -o CMakeFiles/plugin_ops.dir/ops/delnonpolarh.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/delnonpolarh.cpp [ 21%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/gen2D.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/gen2D.o -MF CMakeFiles/plugin_ops.dir/ops/gen2D.o.d -o CMakeFiles/plugin_ops.dir/ops/gen2D.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/gen2D.cpp [ 21%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/fillUC.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/fillUC.o -MF CMakeFiles/plugin_ops.dir/ops/fillUC.o.d -o CMakeFiles/plugin_ops.dir/ops/fillUC.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/fillUC.cpp [ 21%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/forcefield.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/forcefield.o -MF CMakeFiles/plugin_ops.dir/ops/forcefield.o.d -o CMakeFiles/plugin_ops.dir/ops/forcefield.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/forcefield.cpp [ 22%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/gen3d.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS 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-DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/largest.o -MF CMakeFiles/plugin_ops.dir/ops/largest.o.d -o CMakeFiles/plugin_ops.dir/ops/largest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/largest.cpp [ 22%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/loader.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN 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/usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/opsplit.o -MF CMakeFiles/plugin_ops.dir/ops/opsplit.o.d -o CMakeFiles/plugin_ops.dir/ops/opsplit.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/opsplit.cpp [ 22%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/optransform.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/optransform.o -MF CMakeFiles/plugin_ops.dir/ops/optransform.o.d -o CMakeFiles/plugin_ops.dir/ops/optransform.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/optransform.cpp [ 23%] Building CXX object 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/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/partialcharges.cpp [ 23%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/readconformers.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/readconformers.o -MF CMakeFiles/plugin_ops.dir/ops/readconformers.o.d -o CMakeFiles/plugin_ops.dir/ops/readconformers.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/readconformers.cpp [ 23%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/sort.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/sort.o -MF CMakeFiles/plugin_ops.dir/ops/sort.o.d -o CMakeFiles/plugin_ops.dir/ops/sort.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/sort.cpp [ 23%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opisomorph.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/opisomorph.o -MF CMakeFiles/plugin_ops.dir/ops/opisomorph.o.d -o CMakeFiles/plugin_ops.dir/ops/opisomorph.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/opisomorph.cpp [ 23%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/ophighlight.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/ophighlight.o -MF CMakeFiles/plugin_ops.dir/ops/ophighlight.o.d -o CMakeFiles/plugin_ops.dir/ops/ophighlight.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/ophighlight.cpp [ 24%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/xout.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/xout.o -MF CMakeFiles/plugin_ops.dir/ops/xout.o.d -o CMakeFiles/plugin_ops.dir/ops/xout.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/xout.cpp [ 24%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/conformer.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/conformer.o -MF CMakeFiles/plugin_ops.dir/ops/conformer.o.d -o CMakeFiles/plugin_ops.dir/ops/conformer.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/conformer.cpp [ 24%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opalign.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/opalign.o -MF CMakeFiles/plugin_ops.dir/ops/opalign.o.d -o CMakeFiles/plugin_ops.dir/ops/opalign.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/opalign.cpp [ 24%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opconfab.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include 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/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi/CMakeFiles/inchi.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/libinchi/CMakeFiles/inchi.dir/build.make src/formats/libinchi/CMakeFiles/inchi.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 24%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichi_bns.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ichi_bns.o -MF CMakeFiles/inchi.dir/ichi_bns.o.d -o CMakeFiles/inchi.dir/ichi_bns.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ichi_bns.c [ 24%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichi_io.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS 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-isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ichiisot.o -MF CMakeFiles/inchi.dir/ichiisot.o.d -o CMakeFiles/inchi.dir/ichiisot.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ichiisot.c [ 25%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichilnct.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ichilnct.o -MF CMakeFiles/inchi.dir/ichilnct.o.d -o CMakeFiles/inchi.dir/ichilnct.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ichilnct.c [ 25%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimak2.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ichimak2.o -MF CMakeFiles/inchi.dir/ichimak2.o.d -o CMakeFiles/inchi.dir/ichimak2.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ichimak2.c [ 26%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimake.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ichimake.o -MF CMakeFiles/inchi.dir/ichimake.o.d -o CMakeFiles/inchi.dir/ichimake.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ichimake.c [ 26%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimap1.o cd 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/usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ichimap4.o -MF CMakeFiles/inchi.dir/ichimap4.o.d -o CMakeFiles/inchi.dir/ichimap4.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ichimap4.c [ 26%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichinorm.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ichinorm.o -MF CMakeFiles/inchi.dir/ichinorm.o.d -o CMakeFiles/inchi.dir/ichinorm.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ichinorm.c [ 26%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiparm.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ichiparm.o -MF CMakeFiles/inchi.dir/ichiparm.o.d -o CMakeFiles/inchi.dir/ichiparm.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ichiparm.c [ 27%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiprt1.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS 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-isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ichiread.o -MF CMakeFiles/inchi.dir/ichiread.o.d -o CMakeFiles/inchi.dir/ichiread.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ichiread.c [ 28%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiring.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ichiring.o -MF CMakeFiles/inchi.dir/ichiring.o.d -o CMakeFiles/inchi.dir/ichiring.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ichiring.c [ 28%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr1.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr1.o -MF CMakeFiles/inchi.dir/ichirvr1.o.d -o CMakeFiles/inchi.dir/ichirvr1.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ichirvr1.c [ 28%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr2.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr2.o -MF CMakeFiles/inchi.dir/ichirvr2.o.d -o CMakeFiles/inchi.dir/ichirvr2.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ichirvr2.c [ 28%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr3.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr3.o -MF CMakeFiles/inchi.dir/ichirvr3.o.d -o CMakeFiles/inchi.dir/ichirvr3.o -c 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/usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr5.o -MF CMakeFiles/inchi.dir/ichirvr5.o.d -o CMakeFiles/inchi.dir/ichirvr5.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ichirvr5.c [ 29%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr6.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ikey_dll.o -MF CMakeFiles/inchi.dir/ikey_dll.o.d -o CMakeFiles/inchi.dir/ikey_dll.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ikey_dll.c [ 30%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/inchi_dll.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/inchi_dll.o -MF CMakeFiles/inchi.dir/inchi_dll.o.d -o CMakeFiles/inchi.dir/inchi_dll.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/inchi_dll.c [ 30%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/inchi_dll_a.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/runichi.o -MF CMakeFiles/inchi.dir/runichi.o.d -o CMakeFiles/inchi.dir/runichi.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/runichi.c [ 31%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/sha2.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/sha2.o -MF CMakeFiles/inchi.dir/sha2.o.d -o CMakeFiles/inchi.dir/sha2.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/sha2.c [ 31%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/strutil.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/strutil.o -MF CMakeFiles/inchi.dir/strutil.o.d -o CMakeFiles/inchi.dir/strutil.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/strutil.c [ 31%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/util.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/util.o -MF CMakeFiles/inchi.dir/util.o.d -o CMakeFiles/inchi.dir/util.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/util.c [ 32%] Linking C shared library ../../../lib/libinchi.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cmake -E cmake_link_script CMakeFiles/inchi.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -O2 -march=i586 -mtune=i686 -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -Wl,-soname,libinchi.so.0 -o ../../../lib/libinchi.so.0.4.1 CMakeFiles/inchi.dir/ichi_bns.o CMakeFiles/inchi.dir/ichi_io.o CMakeFiles/inchi.dir/ichican2.o CMakeFiles/inchi.dir/ichicano.o CMakeFiles/inchi.dir/ichicans.o CMakeFiles/inchi.dir/ichiisot.o CMakeFiles/inchi.dir/ichilnct.o CMakeFiles/inchi.dir/ichimak2.o CMakeFiles/inchi.dir/ichimake.o CMakeFiles/inchi.dir/ichimap1.o CMakeFiles/inchi.dir/ichimap2.o CMakeFiles/inchi.dir/ichimap4.o CMakeFiles/inchi.dir/ichinorm.o CMakeFiles/inchi.dir/ichiparm.o CMakeFiles/inchi.dir/ichiprt1.o CMakeFiles/inchi.dir/ichiprt2.o CMakeFiles/inchi.dir/ichiprt3.o CMakeFiles/inchi.dir/ichiqueu.o CMakeFiles/inchi.dir/ichiread.o 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src/formats/CMakeFiles/cmlreactformat.dir/build.make src/formats/CMakeFiles/cmlreactformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 33%] Building CXX object src/formats/CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dcmlreactformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.o -MF CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.o.d -o CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/xml/cmlreactformat.cpp [ 33%] Building CXX object src/formats/CMakeFiles/cmlreactformat.dir/xml/xml.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dcmlreactformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/cmlreactformat.dir/xml/xml.o -MF CMakeFiles/cmlreactformat.dir/xml/xml.o.d -o CMakeFiles/cmlreactformat.dir/xml/xml.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/xml/xml.cpp [ 33%] Linking CXX shared module ../../lib/cmlreactformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmlreactformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib/cmlreactformat.so CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.o CMakeFiles/cmlreactformat.dir/xml/xml.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib: -lm -ldl -lz -lcairo ../../lib/libinchi.so.0.4.1 -lm -lxml2 ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 33%] Built target cmlreactformat make -f src/formats/CMakeFiles/xmlformat.dir/build.make src/formats/CMakeFiles/xmlformat.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/CMakeFiles/xmlformat.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/xmlformat.dir/build.make src/formats/CMakeFiles/xmlformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 34%] Building CXX object src/formats/CMakeFiles/xmlformat.dir/xml/xmlformat.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER 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src/formats/CMakeFiles/xmlformat.dir/xml/xml.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dxmlformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/xmlformat.dir/xml/xml.o -MF 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/png2format.dir/__/depict/cairopainter.o -MF CMakeFiles/png2format.dir/__/depict/cairopainter.o.d -o CMakeFiles/png2format.dir/__/depict/cairopainter.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/depict/cairopainter.cpp [ 35%] Linking CXX shared module ../../lib/png2format.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/png2format.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings 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/usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/xedformat.dir/xedformat.o -MF CMakeFiles/xedformat.dir/xedformat.o.d -o CMakeFiles/xedformat.dir/xedformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/xedformat.cpp [ 35%] Linking CXX shared module ../../lib/xedformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xedformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib/xedformat.so CMakeFiles/xedformat.dir/xedformat.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib: -lm -ldl -lz -lcairo 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/unichemformat.dir/unichemformat.o -MF CMakeFiles/unichemformat.dir/unichemformat.o.d -o CMakeFiles/unichemformat.dir/unichemformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/unichemformat.cpp [ 35%] Linking CXX shared module ../../lib/unichemformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/unichemformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/cdxmlformat.dir/xml/xml.o -MF CMakeFiles/cdxmlformat.dir/xml/xml.o.d -o CMakeFiles/cdxmlformat.dir/xml/xml.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/xml/xml.cpp [ 38%] Linking CXX shared module ../../lib/cdxmlformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cdxmlformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib/cdxmlformat.so 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/opendxformat.dir/opendxformat.o -MF CMakeFiles/opendxformat.dir/opendxformat.o.d -o CMakeFiles/opendxformat.dir/opendxformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/opendxformat.cpp [ 38%] Linking CXX shared module ../../lib/opendxformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/opendxformat.dir/link.txt --verbose=1 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'/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 39%] Building CXX object src/formats/CMakeFiles/mmcifformat.dir/mmcifformat.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dmmcifformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/lmpdatformat.dir/lmpdatformat.o -MF CMakeFiles/lmpdatformat.dir/lmpdatformat.o.d -o CMakeFiles/lmpdatformat.dir/lmpdatformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/lmpdatformat.cpp [ 39%] Linking CXX shared module ../../lib/lmpdatformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/lmpdatformat.dir/link.txt --verbose=1 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/usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/ghemicalformat.dir/ghemicalformat.o -MF CMakeFiles/ghemicalformat.dir/ghemicalformat.o.d -o CMakeFiles/ghemicalformat.dir/ghemicalformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/ghemicalformat.cpp [ 41%] Linking CXX shared module ../../lib/ghemicalformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/ghemicalformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib/ghemicalformat.so CMakeFiles/ghemicalformat.dir/ghemicalformat.o 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/fpsformat.dir/fpsformat.o -MF CMakeFiles/fpsformat.dir/fpsformat.o.d -o CMakeFiles/fpsformat.dir/fpsformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/fpsformat.cpp [ 42%] Linking CXX shared module ../../lib/fpsformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fpsformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/fastsearchformat.dir/fastsearchformat.o -MF CMakeFiles/fastsearchformat.dir/fastsearchformat.o.d -o CMakeFiles/fastsearchformat.dir/fastsearchformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/fastsearchformat.cpp [ 43%] Linking CXX shared module ../../lib/fastsearchformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fastsearchformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags 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/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/CMakeFiles/exyzformat.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/exyzformat.dir/build.make src/formats/CMakeFiles/exyzformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 43%] Building CXX object src/formats/CMakeFiles/exyzformat.dir/exyzformat.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dexyzformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/exyzformat.dir/exyzformat.o -MF CMakeFiles/exyzformat.dir/exyzformat.o.d -o CMakeFiles/exyzformat.dir/exyzformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/exyzformat.cpp [ 43%] Linking CXX shared module ../../lib/exyzformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/exyzformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib/exyzformat.so CMakeFiles/exyzformat.dir/exyzformat.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib: -lm -ldl -lz -lcairo ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 43%] Built target exyzformat make -f src/formats/CMakeFiles/viewmolformat.dir/build.make src/formats/CMakeFiles/viewmolformat.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" 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Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/aoforceformat.dir/build.make src/formats/CMakeFiles/aoforceformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 45%] Building CXX object src/formats/CMakeFiles/aoforceformat.dir/aoforceformat.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Daoforceformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/aoforceformat.dir/aoforceformat.o -MF CMakeFiles/aoforceformat.dir/aoforceformat.o.d -o CMakeFiles/aoforceformat.dir/aoforceformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/aoforceformat.cpp [ 45%] Linking CXX shared module ../../lib/aoforceformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/aoforceformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc 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/usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/cccformat.dir/cccformat.o -MF CMakeFiles/cccformat.dir/cccformat.o.d -o CMakeFiles/cccformat.dir/cccformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/cccformat.cpp [ 49%] Linking CXX shared module ../../lib/cccformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cccformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib/cccformat.so CMakeFiles/cccformat.dir/cccformat.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib: -lm -ldl -lz -lcairo 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/titleformat.dir/titleformat.o -MF CMakeFiles/titleformat.dir/titleformat.o.d -o CMakeFiles/titleformat.dir/titleformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/titleformat.cpp [ 49%] Linking CXX shared module ../../lib/titleformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/titleformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib/titleformat.so CMakeFiles/titleformat.dir/titleformat.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib: -lm -ldl -lz -lcairo ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 49%] Built target titleformat make -f src/formats/CMakeFiles/jaguarformat.dir/build.make src/formats/CMakeFiles/jaguarformat.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/jaguarformat.dir/jaguarformat.o -MF CMakeFiles/jaguarformat.dir/jaguarformat.o.d -o CMakeFiles/jaguarformat.dir/jaguarformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/jaguarformat.cpp [ 50%] Linking CXX shared module ../../lib/jaguarformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/jaguarformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib/jaguarformat.so CMakeFiles/jaguarformat.dir/jaguarformat.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib: -lm -ldl -lz -lcairo ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 50%] Built target jaguarformat make -f src/formats/CMakeFiles/textformat.dir/build.make src/formats/CMakeFiles/textformat.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 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-D_LARGE_FILES -D__WXGTK__ -Dtextformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/textformat.dir/textformat.o -MF CMakeFiles/textformat.dir/textformat.o.d -o CMakeFiles/textformat.dir/textformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/textformat.cpp [ 50%] Linking CXX shared module ../../lib/textformat.so cd 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'/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 51%] Built target rxnformat make -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/CMakeFiles/gamessformat.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 51%] Building CXX object src/formats/CMakeFiles/gamessformat.dir/gamessformat.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dgamessformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/gamessformat.dir/gamessformat.o -MF CMakeFiles/gamessformat.dir/gamessformat.o.d -o CMakeFiles/gamessformat.dir/gamessformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/gamessformat.cpp [ 51%] Linking CXX shared module ../../lib/gamessformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gamessformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib/gamessformat.so CMakeFiles/gamessformat.dir/gamessformat.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib: -lm -ldl -lz -lcairo ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 51%] Built target gamessformat make -f src/formats/CMakeFiles/molproformat.dir/build.make src/formats/CMakeFiles/molproformat.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/molproformat.dir/molproformat.o -MF CMakeFiles/molproformat.dir/molproformat.o.d -o CMakeFiles/molproformat.dir/molproformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/molproformat.cpp [ 51%] Linking CXX shared module ../../lib/molproformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/molproformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 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/usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/MNAformat.dir/MNAformat.o -MF CMakeFiles/MNAformat.dir/MNAformat.o.d -o CMakeFiles/MNAformat.dir/MNAformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/MNAformat.cpp [ 53%] Linking CXX shared module ../../lib/MNAformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/MNAformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib/MNAformat.so CMakeFiles/MNAformat.dir/MNAformat.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib: -lm -ldl -lz -lcairo 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make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/pubchemjsonformat.dir/build.make src/formats/CMakeFiles/pubchemjsonformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 54%] Building CXX object src/formats/CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dpubchemjsonformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.o -MF CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.o.d -o CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/json/pubchemjsonformat.cpp [ 54%] Building CXX object src/formats/CMakeFiles/pubchemjsonformat.dir/json/jsoncpp.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ 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'/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/painterformat.dir/build.make src/formats/CMakeFiles/painterformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 55%] Building CXX object src/formats/CMakeFiles/painterformat.dir/painterformat.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dpainterformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/painterformat.dir/painterformat.o -MF CMakeFiles/painterformat.dir/painterformat.o.d -o CMakeFiles/painterformat.dir/painterformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/painterformat.cpp [ 55%] Building CXX object src/formats/CMakeFiles/painterformat.dir/__/depict/commandpainter.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dpainterformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/painterformat.dir/__/depict/commandpainter.o -MF CMakeFiles/painterformat.dir/__/depict/commandpainter.o.d -o CMakeFiles/painterformat.dir/__/depict/commandpainter.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/depict/commandpainter.cpp [ 55%] Linking CXX shared module ../../lib/painterformat.so cd 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/usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/gausscubeformat.dir/gausscubeformat.o -MF CMakeFiles/gausscubeformat.dir/gausscubeformat.o.d -o CMakeFiles/gausscubeformat.dir/gausscubeformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/gausscubeformat.cpp [ 56%] Linking CXX shared module ../../lib/gausscubeformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gausscubeformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib/gausscubeformat.so CMakeFiles/gausscubeformat.dir/gausscubeformat.o 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/qchemformat.dir/qchemformat.o -MF CMakeFiles/qchemformat.dir/qchemformat.o.d -o CMakeFiles/qchemformat.dir/qchemformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/qchemformat.cpp [ 56%] Linking CXX shared module ../../lib/qchemformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/qchemformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 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/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/CMakeFiles/xyzformat.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/xyzformat.dir/build.make src/formats/CMakeFiles/xyzformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 57%] Building CXX object src/formats/CMakeFiles/xyzformat.dir/xyzformat.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dxyzformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/xyzformat.dir/xyzformat.o -MF CMakeFiles/xyzformat.dir/xyzformat.o.d -o CMakeFiles/xyzformat.dir/xyzformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/xyzformat.cpp [ 57%] Linking CXX shared module ../../lib/xyzformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E 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/usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/castepformat.dir/castepformat.o -MF CMakeFiles/castepformat.dir/castepformat.o.d -o CMakeFiles/castepformat.dir/castepformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/castepformat.cpp [ 58%] Linking CXX shared module ../../lib/castepformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/castepformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib/castepformat.so CMakeFiles/castepformat.dir/castepformat.o 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/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/CMakeFiles/gaussformat.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/gaussformat.dir/build.make src/formats/CMakeFiles/gaussformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 58%] Building CXX object src/formats/CMakeFiles/gaussformat.dir/gaussformat.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dgaussformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/gaussformat.dir/gaussformat.o -MF CMakeFiles/gaussformat.dir/gaussformat.o.d -o CMakeFiles/gaussformat.dir/gaussformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/gaussformat.cpp [ 58%] Linking CXX shared module ../../lib/gaussformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gaussformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/featformat.dir/featformat.o -MF CMakeFiles/featformat.dir/featformat.o.d -o CMakeFiles/featformat.dir/featformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/featformat.cpp [ 58%] Linking CXX shared module ../../lib/featformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E 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/usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/molreport.dir/molreport.o -MF CMakeFiles/molreport.dir/molreport.o.d -o CMakeFiles/molreport.dir/molreport.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/molreport.cpp [ 60%] Linking CXX shared module ../../lib/molreport.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/molreport.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib/molreport.so CMakeFiles/molreport.dir/molreport.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib: -lm -ldl -lz -lcairo 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directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 61%] Building CXX object src/formats/CMakeFiles/outformat.dir/outformat.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Doutformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/outformat.dir/outformat.o -MF CMakeFiles/outformat.dir/outformat.o.d -o CMakeFiles/outformat.dir/outformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/outformat.cpp [ 61%] Linking CXX shared module ../../lib/outformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/outformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib/outformat.so 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/acrformat.dir/acrformat.o -MF CMakeFiles/acrformat.dir/acrformat.o.d -o CMakeFiles/acrformat.dir/acrformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/acrformat.cpp [ 62%] Linking CXX shared module ../../lib/acrformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/acrformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/mpqcformat.dir/mpqcformat.o -MF CMakeFiles/mpqcformat.dir/mpqcformat.o.d -o CMakeFiles/mpqcformat.dir/mpqcformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/mpqcformat.cpp [ 63%] Linking CXX shared module ../../lib/mpqcformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mpqcformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib/mpqcformat.so CMakeFiles/mpqcformat.dir/mpqcformat.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib: -lm -ldl -lz -lcairo ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 63%] Built target mpqcformat make -f src/formats/CMakeFiles/fchkformat.dir/build.make src/formats/CMakeFiles/fchkformat.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" 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'/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 64%] Building CXX object src/formats/CMakeFiles/povrayformat.dir/povrayformat.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dpovrayformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC 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make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 64%] Built target povrayformat make -f src/formats/CMakeFiles/inchiformat.dir/build.make src/formats/CMakeFiles/inchiformat.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/CMakeFiles/inchiformat.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make 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-isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/inchiformat.dir/inchiformat.o -MF CMakeFiles/inchiformat.dir/inchiformat.o.d -o CMakeFiles/inchiformat.dir/inchiformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/inchiformat.cpp [ 64%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/getinchi.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dinchiformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/inchiformat.dir/getinchi.o -MF CMakeFiles/inchiformat.dir/getinchi.o.d -o CMakeFiles/inchiformat.dir/getinchi.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/getinchi.cpp [ 64%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/__/ops/unique.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dinchiformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/inchiformat.dir/__/ops/unique.o -MF CMakeFiles/inchiformat.dir/__/ops/unique.o.d -o CMakeFiles/inchiformat.dir/__/ops/unique.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/unique.cpp [ 64%] Linking CXX shared module ../../lib/inchiformat.so cd 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'/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/CMakeFiles/gausszmatformat.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/gausszmatformat.dir/build.make src/formats/CMakeFiles/gausszmatformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 65%] Building CXX object src/formats/CMakeFiles/gausszmatformat.dir/gausszmatformat.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dgausszmatformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/gausszmatformat.dir/gausszmatformat.o -MF CMakeFiles/gausszmatformat.dir/gausszmatformat.o.d -o CMakeFiles/gausszmatformat.dir/gausszmatformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/gausszmatformat.cpp [ 65%] Linking CXX shared module ../../lib/gausszmatformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gausszmatformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib/gausszmatformat.so CMakeFiles/gausszmatformat.dir/gausszmatformat.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib: -lm -ldl -lz -lcairo ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 65%] Built target gausszmatformat make -f src/formats/CMakeFiles/msiformat.dir/build.make src/formats/CMakeFiles/msiformat.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/CMakeFiles/msiformat.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f 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/usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/msiformat.dir/msiformat.o -MF CMakeFiles/msiformat.dir/msiformat.o.d -o CMakeFiles/msiformat.dir/msiformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/msiformat.cpp [ 65%] Linking CXX shared module ../../lib/msiformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/msiformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib/msiformat.so CMakeFiles/msiformat.dir/msiformat.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib: -lm -ldl -lz -lcairo ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 65%] Built target msiformat make -f src/formats/CMakeFiles/gulpformat.dir/build.make src/formats/CMakeFiles/gulpformat.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/CMakeFiles/gulpformat.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/gulpformat.dir/build.make src/formats/CMakeFiles/gulpformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 65%] Building CXX object src/formats/CMakeFiles/gulpformat.dir/gulpformat.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dgulpformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/gulpformat.dir/gulpformat.o -MF CMakeFiles/gulpformat.dir/gulpformat.o.d -o CMakeFiles/gulpformat.dir/gulpformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/gulpformat.cpp [ 65%] Linking CXX shared module ../../lib/gulpformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gulpformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib/gulpformat.so CMakeFiles/gulpformat.dir/gulpformat.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib: -lm -ldl -lz -lcairo ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 65%] Built target gulpformat make -f src/formats/CMakeFiles/smileyformat.dir/build.make src/formats/CMakeFiles/smileyformat.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/CMakeFiles/smileyformat.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/smileyformat.dir/build.make src/formats/CMakeFiles/smileyformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 65%] Building CXX object src/formats/CMakeFiles/smileyformat.dir/smileyformat.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dsmileyformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/smileyformat.dir/smileyformat.o -MF CMakeFiles/smileyformat.dir/smileyformat.o.d -o CMakeFiles/smileyformat.dir/smileyformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/smileyformat.cpp [ 65%] Linking CXX shared module ../../lib/smileyformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/smileyformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib/smileyformat.so CMakeFiles/smileyformat.dir/smileyformat.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib: -lm -ldl -lz -lcairo ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 65%] Built target smileyformat make -f src/formats/CMakeFiles/hinformat.dir/build.make src/formats/CMakeFiles/hinformat.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/CMakeFiles/hinformat.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/hinformat.dir/build.make src/formats/CMakeFiles/hinformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 66%] Building CXX object src/formats/CMakeFiles/hinformat.dir/hinformat.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dhinformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/hinformat.dir/hinformat.o -MF CMakeFiles/hinformat.dir/hinformat.o.d -o CMakeFiles/hinformat.dir/hinformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/hinformat.cpp [ 66%] Linking CXX shared module ../../lib/hinformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && 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/usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/pointcloudformat.dir/pointcloudformat.o -MF CMakeFiles/pointcloudformat.dir/pointcloudformat.o.d -o CMakeFiles/pointcloudformat.dir/pointcloudformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/pointcloudformat.cpp [ 74%] Linking CXX shared module ../../lib/pointcloudformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pointcloudformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib/pointcloudformat.so 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/APIInterface.dir/APIInterface.o -MF CMakeFiles/APIInterface.dir/APIInterface.o.d -o CMakeFiles/APIInterface.dir/APIInterface.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/APIInterface.cpp [ 74%] Linking CXX shared module ../../lib/APIInterface.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/APIInterface.dir/link.txt --verbose=1 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/usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/chem3dformat.dir/chem3dformat.o -MF CMakeFiles/chem3dformat.dir/chem3dformat.o.d -o CMakeFiles/chem3dformat.dir/chem3dformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/chem3dformat.cpp [ 75%] Linking CXX shared module ../../lib/chem3dformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chem3dformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib/chem3dformat.so CMakeFiles/chem3dformat.dir/chem3dformat.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib: -lm -ldl -lz -lcairo ../../lib/libinchi.so.0.4.1 -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 75%] Built target chem3dformat make -f src/formats/CMakeFiles/alchemyformat.dir/build.make src/formats/CMakeFiles/alchemyformat.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/alchemyformat.dir/alchemyformat.o -MF CMakeFiles/alchemyformat.dir/alchemyformat.o.d -o CMakeFiles/alchemyformat.dir/alchemyformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/alchemyformat.cpp [ 75%] Linking CXX shared module ../../lib/alchemyformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/alchemyformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -march=i586 -mtune=i686 -fpermissive -pthread 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'/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/tools /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/tools /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/tools/CMakeFiles/babel.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f tools/CMakeFiles/babel.dir/build.make tools/CMakeFiles/babel.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 81%] Building CXX object tools/CMakeFiles/babel.dir/babel.o cd 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/usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT tools/CMakeFiles/obprop.dir/obprop.o -MF CMakeFiles/obprop.dir/obprop.o.d -o CMakeFiles/obprop.dir/obprop.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/tools/obprop.cpp [ 85%] Linking CXX executable ../bin/obprop cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obprop.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -rdynamic CMakeFiles/obprop.dir/obprop.o -o ../bin/obprop -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib: ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 85%] Built target obprop make -f tools/CMakeFiles/obrotate.dir/build.make tools/CMakeFiles/obrotate.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/tools /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/tools /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/tools/CMakeFiles/obrotate.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f 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CMakeFiles/obrotate.dir/obrotate.o.d -o CMakeFiles/obrotate.dir/obrotate.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/tools/obrotate.cpp [ 86%] Linking CXX executable ../bin/obrotate cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obrotate.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -rdynamic CMakeFiles/obrotate.dir/obrotate.o -o ../bin/obrotate -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib: ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 86%] Built target obrotate make -f src/GUI/CMakeFiles/obgui.dir/build.make src/GUI/CMakeFiles/obgui.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/GUI /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/GUI /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/GUI/CMakeFiles/obgui.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/GUI/CMakeFiles/obgui.dir/build.make src/GUI/CMakeFiles/obgui.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 87%] Building CXX object src/GUI/CMakeFiles/obgui.dir/OBGUI.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/GUI && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/GUI/. -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/GUI/CMakeFiles/obgui.dir/OBGUI.o -MF CMakeFiles/obgui.dir/OBGUI.o.d -o CMakeFiles/obgui.dir/OBGUI.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/GUI/OBGUI.cpp [ 87%] Building CXX object src/GUI/CMakeFiles/obgui.dir/stdwx.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/GUI && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/GUI/. -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/GUI/CMakeFiles/obgui.dir/stdwx.o -MF CMakeFiles/obgui.dir/stdwx.o.d -o CMakeFiles/obgui.dir/stdwx.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/GUI/stdwx.cpp [ 87%] Building CXX object src/GUI/CMakeFiles/obgui.dir/optswx.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/GUI && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/GUI/. -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -MD -MT src/GUI/CMakeFiles/obgui.dir/optswx.o -MF CMakeFiles/obgui.dir/optswx.o.d -o CMakeFiles/obgui.dir/optswx.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/GUI/optswx.cpp /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/GUI/optswx.cpp: In member function ‘char* DynOptionswx::strcasestr(const char*, const char*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/GUI/optswx.cpp:394:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 394 | register unsigned char *h, *n, *hc, *nc; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/GUI/optswx.cpp:394:31: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 394 | register unsigned char *h, *n, *hc, *nc; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/GUI/optswx.cpp:394:35: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 394 | register unsigned char *h, *n, *hc, *nc; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/GUI/optswx.cpp:394:40: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 394 | register unsigned char *h, *n, *hc, *nc; | ^~ [ 87%] Linking CXX executable ../../bin/obgui cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/GUI && /usr/bin/cmake -E cmake_link_script CMakeFiles/obgui.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -rdynamic CMakeFiles/obgui.dir/OBGUI.o CMakeFiles/obgui.dir/stdwx.o CMakeFiles/obgui.dir/optswx.o -o ../../bin/obgui -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib: ../../lib/libopenbabel.so.5.0.0 -pthread -L/usr/X11R6/lib -lwx_baseu-2.8 -lwx_gtk2u_core-2.8 -lwx_gtk2u_adv-2.8 -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 87%] Built target obgui make -f test/CMakeFiles/roundtrip.dir/build.make test/CMakeFiles/roundtrip.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test/CMakeFiles/roundtrip.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f test/CMakeFiles/roundtrip.dir/build.make test/CMakeFiles/roundtrip.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 87%] Building CXX object test/CMakeFiles/roundtrip.dir/roundtrip.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/roundtrip.dir/roundtrip.o -MF CMakeFiles/roundtrip.dir/roundtrip.o.d -o CMakeFiles/roundtrip.dir/roundtrip.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/roundtrip.cpp [ 88%] Linking CXX executable ../bin/roundtrip cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/roundtrip.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -rdynamic CMakeFiles/roundtrip.dir/roundtrip.o -o ../bin/roundtrip -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib: ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 88%] Built target roundtrip make -f test/CMakeFiles/test_inchiwrite.dir/build.make test/CMakeFiles/test_inchiwrite.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test/CMakeFiles/test_inchiwrite.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f test/CMakeFiles/test_inchiwrite.dir/build.make test/CMakeFiles/test_inchiwrite.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 88%] Building CXX object test/CMakeFiles/test_inchiwrite.dir/inchiwrite.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_inchiwrite.dir/inchiwrite.o -MF CMakeFiles/test_inchiwrite.dir/inchiwrite.o.d -o CMakeFiles/test_inchiwrite.dir/inchiwrite.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/inchiwrite.cpp [ 88%] Building CXX object test/CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.o -MF CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.o.d -o CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/getinchi.cpp [ 88%] Linking CXX executable ../bin/test_inchiwrite cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_inchiwrite.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -rdynamic CMakeFiles/test_inchiwrite.dir/inchiwrite.o CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.o -o ../bin/test_inchiwrite -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 88%] Built target test_inchiwrite make -f test/CMakeFiles/test_runner.dir/build.make test/CMakeFiles/test_runner.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test/CMakeFiles/test_runner.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f test/CMakeFiles/test_runner.dir/build.make test/CMakeFiles/test_runner.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/test_runner.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/test_runner.o -MF CMakeFiles/test_runner.dir/test_runner.o.d -o CMakeFiles/test_runner.dir/test_runner.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test/test_runner.cpp [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/aligntest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/aligntest.o -MF CMakeFiles/test_runner.dir/aligntest.o.d -o CMakeFiles/test_runner.dir/aligntest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/aligntest.cpp [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/automorphismtest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/automorphismtest.o -MF CMakeFiles/test_runner.dir/automorphismtest.o.d -o CMakeFiles/test_runner.dir/automorphismtest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/automorphismtest.cpp [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/buildertest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/buildertest.o -MF CMakeFiles/test_runner.dir/buildertest.o.d -o CMakeFiles/test_runner.dir/buildertest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/buildertest.cpp [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/canonconsistenttest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/canonconsistenttest.o -MF CMakeFiles/test_runner.dir/canonconsistenttest.o.d -o CMakeFiles/test_runner.dir/canonconsistenttest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/canonconsistenttest.cpp [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/canonstabletest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/canonstabletest.o -MF CMakeFiles/test_runner.dir/canonstabletest.o.d -o CMakeFiles/test_runner.dir/canonstabletest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/canonstabletest.cpp [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/carspacegrouptest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/carspacegrouptest.o -MF CMakeFiles/test_runner.dir/carspacegrouptest.o.d -o CMakeFiles/test_runner.dir/carspacegrouptest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/carspacegrouptest.cpp [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/cifspacegrouptest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/cifspacegrouptest.o -MF CMakeFiles/test_runner.dir/cifspacegrouptest.o.d -o CMakeFiles/test_runner.dir/cifspacegrouptest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/cifspacegrouptest.cpp [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/cistranstest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/cistranstest.o -MF CMakeFiles/test_runner.dir/cistranstest.o.d -o CMakeFiles/test_runner.dir/cistranstest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/cistranstest.cpp [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/graphsymtest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/graphsymtest.o -MF CMakeFiles/test_runner.dir/graphsymtest.o.d -o CMakeFiles/test_runner.dir/graphsymtest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/graphsymtest.cpp [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/gziptest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/gziptest.o -MF CMakeFiles/test_runner.dir/gziptest.o.d -o CMakeFiles/test_runner.dir/gziptest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/gziptest.cpp [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/implicitHtest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/implicitHtest.o -MF CMakeFiles/test_runner.dir/implicitHtest.o.d -o CMakeFiles/test_runner.dir/implicitHtest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/implicitHtest.cpp [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/lssrtest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/lssrtest.o -MF CMakeFiles/test_runner.dir/lssrtest.o.d -o CMakeFiles/test_runner.dir/lssrtest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/lssrtest.cpp [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/isomorphismtest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/isomorphismtest.o -MF CMakeFiles/test_runner.dir/isomorphismtest.o.d -o CMakeFiles/test_runner.dir/isomorphismtest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/isomorphismtest.cpp [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/multicmltest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/multicmltest.o -MF CMakeFiles/test_runner.dir/multicmltest.o.d -o CMakeFiles/test_runner.dir/multicmltest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/multicmltest.cpp [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/regressionstest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/regressionstest.o -MF CMakeFiles/test_runner.dir/regressionstest.o.d -o CMakeFiles/test_runner.dir/regressionstest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/regressionstest.cpp [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/rotortest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/rotortest.o -MF CMakeFiles/test_runner.dir/rotortest.o.d -o CMakeFiles/test_runner.dir/rotortest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/rotortest.cpp [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/shuffletest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/shuffletest.o -MF CMakeFiles/test_runner.dir/shuffletest.o.d -o CMakeFiles/test_runner.dir/shuffletest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/shuffletest.cpp [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/smilestest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/smilestest.o -MF CMakeFiles/test_runner.dir/smilestest.o.d -o CMakeFiles/test_runner.dir/smilestest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/smilestest.cpp [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/spectrophoretest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/spectrophoretest.o -MF CMakeFiles/test_runner.dir/spectrophoretest.o.d -o CMakeFiles/test_runner.dir/spectrophoretest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/spectrophoretest.cpp [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/squareplanartest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/squareplanartest.o -MF CMakeFiles/test_runner.dir/squareplanartest.o.d -o CMakeFiles/test_runner.dir/squareplanartest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/squareplanartest.cpp [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/stereotest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/stereotest.o -MF CMakeFiles/test_runner.dir/stereotest.o.d -o CMakeFiles/test_runner.dir/stereotest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/stereotest.cpp [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/stereoperceptiontest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/stereoperceptiontest.o -MF CMakeFiles/test_runner.dir/stereoperceptiontest.o.d -o CMakeFiles/test_runner.dir/stereoperceptiontest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/stereoperceptiontest.cpp [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/tautomertest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/tautomertest.o -MF CMakeFiles/test_runner.dir/tautomertest.o.d -o CMakeFiles/test_runner.dir/tautomertest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/tautomertest.cpp [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/tetrahedraltest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/tetrahedraltest.o -MF CMakeFiles/test_runner.dir/tetrahedraltest.o.d -o CMakeFiles/test_runner.dir/tetrahedraltest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/tetrahedraltest.cpp [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/tetranonplanartest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/tetranonplanartest.o -MF CMakeFiles/test_runner.dir/tetranonplanartest.o.d -o CMakeFiles/test_runner.dir/tetranonplanartest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/tetranonplanartest.cpp [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/tetraplanartest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/tetraplanartest.o -MF CMakeFiles/test_runner.dir/tetraplanartest.o.d -o CMakeFiles/test_runner.dir/tetraplanartest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/tetraplanartest.cpp [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/uniqueidtest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/uniqueidtest.o -MF CMakeFiles/test_runner.dir/uniqueidtest.o.d -o CMakeFiles/test_runner.dir/uniqueidtest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/uniqueidtest.cpp [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/aromatest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/aromatest.o -MF CMakeFiles/test_runner.dir/aromatest.o.d -o CMakeFiles/test_runner.dir/aromatest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/aromatest.cpp [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/atom.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/atom.o -MF CMakeFiles/test_runner.dir/atom.o.d -o CMakeFiles/test_runner.dir/atom.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/atom.cpp [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/bond.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/bond.o -MF CMakeFiles/test_runner.dir/bond.o.d -o CMakeFiles/test_runner.dir/bond.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/bond.cpp [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/cansmi.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/cansmi.o -MF CMakeFiles/test_runner.dir/cansmi.o.d -o CMakeFiles/test_runner.dir/cansmi.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/cansmi.cpp [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/charge_mmff94.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/charge_mmff94.o -MF CMakeFiles/test_runner.dir/charge_mmff94.o.d -o CMakeFiles/test_runner.dir/charge_mmff94.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/charge_mmff94.cpp [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/charge_gasteiger.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/charge_gasteiger.o -MF CMakeFiles/test_runner.dir/charge_gasteiger.o.d -o CMakeFiles/test_runner.dir/charge_gasteiger.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/charge_gasteiger.cpp [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/conversion.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/conversion.o -MF CMakeFiles/test_runner.dir/conversion.o.d -o CMakeFiles/test_runner.dir/conversion.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/conversion.cpp [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/datatest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/datatest.o -MF CMakeFiles/test_runner.dir/datatest.o.d -o CMakeFiles/test_runner.dir/datatest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/datatest.cpp [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/ffgaff.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/ffgaff.o -MF CMakeFiles/test_runner.dir/ffgaff.o.d -o CMakeFiles/test_runner.dir/ffgaff.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/ffgaff.cpp [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/ffghemical.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/ffghemical.o -MF CMakeFiles/test_runner.dir/ffghemical.o.d -o CMakeFiles/test_runner.dir/ffghemical.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/ffghemical.cpp [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/ffmmff94.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/ffmmff94.o -MF CMakeFiles/test_runner.dir/ffmmff94.o.d -o CMakeFiles/test_runner.dir/ffmmff94.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/ffmmff94.cpp [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/ffuff.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/ffuff.o -MF CMakeFiles/test_runner.dir/ffuff.o.d -o CMakeFiles/test_runner.dir/ffuff.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/ffuff.cpp [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/formalcharge.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/formalcharge.o -MF CMakeFiles/test_runner.dir/formalcharge.o.d -o CMakeFiles/test_runner.dir/formalcharge.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/formalcharge.cpp [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/format.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/format.o -MF CMakeFiles/test_runner.dir/format.o.d -o CMakeFiles/test_runner.dir/format.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/format.cpp [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/formula.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/formula.o -MF CMakeFiles/test_runner.dir/formula.o.d -o CMakeFiles/test_runner.dir/formula.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/formula.cpp [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/internalcoord.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/internalcoord.o -MF CMakeFiles/test_runner.dir/internalcoord.o.d -o CMakeFiles/test_runner.dir/internalcoord.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/internalcoord.cpp [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/invalidsmarts.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/invalidsmarts.o -MF CMakeFiles/test_runner.dir/invalidsmarts.o.d -o CMakeFiles/test_runner.dir/invalidsmarts.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/invalidsmarts.cpp [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/invalidsmiles.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/invalidsmiles.o -MF CMakeFiles/test_runner.dir/invalidsmiles.o.d -o CMakeFiles/test_runner.dir/invalidsmiles.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/invalidsmiles.cpp [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/iterators.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/iterators.o -MF CMakeFiles/test_runner.dir/iterators.o.d -o CMakeFiles/test_runner.dir/iterators.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/iterators.cpp [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/logp_psa.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/logp_psa.o -MF CMakeFiles/test_runner.dir/logp_psa.o.d -o CMakeFiles/test_runner.dir/logp_psa.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/logp_psa.cpp [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/math.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/math.o -MF CMakeFiles/test_runner.dir/math.o.d -o CMakeFiles/test_runner.dir/math.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/math.cpp [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/mol.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/mol.o -MF CMakeFiles/test_runner.dir/mol.o.d -o CMakeFiles/test_runner.dir/mol.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/mol.cpp [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/phmodel.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/phmodel.o -MF CMakeFiles/test_runner.dir/phmodel.o.d -o CMakeFiles/test_runner.dir/phmodel.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/phmodel.cpp [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/residue.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/residue.o -MF CMakeFiles/test_runner.dir/residue.o.d -o CMakeFiles/test_runner.dir/residue.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/residue.cpp [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/ringtest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/ringtest.o -MF CMakeFiles/test_runner.dir/ringtest.o.d -o CMakeFiles/test_runner.dir/ringtest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/ringtest.cpp [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/smartstest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/smartstest.o -MF CMakeFiles/test_runner.dir/smartstest.o.d -o CMakeFiles/test_runner.dir/smartstest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/smartstest.cpp [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/smartsparse.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/smartsparse.o -MF CMakeFiles/test_runner.dir/smartsparse.o.d -o CMakeFiles/test_runner.dir/smartsparse.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/smartsparse.cpp [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/smilesmatch.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/smilesmatch.o -MF CMakeFiles/test_runner.dir/smilesmatch.o.d -o CMakeFiles/test_runner.dir/smilesmatch.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/smilesmatch.cpp [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/unitcell.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/unitcell.o -MF CMakeFiles/test_runner.dir/unitcell.o.d -o CMakeFiles/test_runner.dir/unitcell.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/unitcell.cpp [100%] Building CXX object test/CMakeFiles/test_runner.dir/cmlreadfile.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/cmlreadfile.o -MF CMakeFiles/test_runner.dir/cmlreadfile.o.d -o CMakeFiles/test_runner.dir/cmlreadfile.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/cmlreadfile.cpp [100%] Building CXX object test/CMakeFiles/test_runner.dir/obtest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/obtest.o -MF CMakeFiles/test_runner.dir/obtest.o.d -o CMakeFiles/test_runner.dir/obtest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/obtest.cpp [100%] Linking CXX executable ../bin/test_runner cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_runner.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -march=i586 -mtune=i686 -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -rdynamic CMakeFiles/test_runner.dir/test_runner.o CMakeFiles/test_runner.dir/aligntest.o CMakeFiles/test_runner.dir/automorphismtest.o CMakeFiles/test_runner.dir/buildertest.o CMakeFiles/test_runner.dir/canonconsistenttest.o CMakeFiles/test_runner.dir/canonstabletest.o CMakeFiles/test_runner.dir/carspacegrouptest.o CMakeFiles/test_runner.dir/cifspacegrouptest.o CMakeFiles/test_runner.dir/cistranstest.o CMakeFiles/test_runner.dir/graphsymtest.o CMakeFiles/test_runner.dir/gziptest.o CMakeFiles/test_runner.dir/implicitHtest.o CMakeFiles/test_runner.dir/lssrtest.o CMakeFiles/test_runner.dir/isomorphismtest.o CMakeFiles/test_runner.dir/multicmltest.o CMakeFiles/test_runner.dir/regressionstest.o CMakeFiles/test_runner.dir/rotortest.o CMakeFiles/test_runner.dir/shuffletest.o CMakeFiles/test_runner.dir/smilestest.o CMakeFiles/test_runner.dir/spectrophoretest.o CMakeFiles/test_runner.dir/squareplanartest.o CMakeFiles/test_runner.dir/stereotest.o CMakeFiles/test_runner.dir/stereoperceptiontest.o CMakeFiles/test_runner.dir/tautomertest.o CMakeFiles/test_runner.dir/tetrahedraltest.o CMakeFiles/test_runner.dir/tetranonplanartest.o CMakeFiles/test_runner.dir/tetraplanartest.o CMakeFiles/test_runner.dir/uniqueidtest.o CMakeFiles/test_runner.dir/aromatest.o CMakeFiles/test_runner.dir/atom.o CMakeFiles/test_runner.dir/bond.o CMakeFiles/test_runner.dir/cansmi.o CMakeFiles/test_runner.dir/charge_mmff94.o CMakeFiles/test_runner.dir/charge_gasteiger.o CMakeFiles/test_runner.dir/conversion.o CMakeFiles/test_runner.dir/datatest.o CMakeFiles/test_runner.dir/ffgaff.o CMakeFiles/test_runner.dir/ffghemical.o CMakeFiles/test_runner.dir/ffmmff94.o CMakeFiles/test_runner.dir/ffuff.o CMakeFiles/test_runner.dir/formalcharge.o CMakeFiles/test_runner.dir/format.o CMakeFiles/test_runner.dir/formula.o CMakeFiles/test_runner.dir/internalcoord.o CMakeFiles/test_runner.dir/invalidsmarts.o CMakeFiles/test_runner.dir/invalidsmiles.o CMakeFiles/test_runner.dir/iterators.o CMakeFiles/test_runner.dir/logp_psa.o CMakeFiles/test_runner.dir/math.o CMakeFiles/test_runner.dir/mol.o CMakeFiles/test_runner.dir/phmodel.o CMakeFiles/test_runner.dir/residue.o CMakeFiles/test_runner.dir/ringtest.o CMakeFiles/test_runner.dir/smartstest.o CMakeFiles/test_runner.dir/smartsparse.o CMakeFiles/test_runner.dir/smilesmatch.o CMakeFiles/test_runner.dir/unitcell.o CMakeFiles/test_runner.dir/cmlreadfile.o CMakeFiles/test_runner.dir/obtest.o -o ../bin/test_runner -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [100%] Built target test_runner make[1]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' /usr/bin/cmake -E cmake_progress_start /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/CMakeFiles 0 Consolidate compiler generated dependencies of target openbabel [ 14%] Built target openbabel Consolidate compiler generated dependencies of target plugin_charges [ 16%] Built target plugin_charges Consolidate compiler generated dependencies of target plugin_forcefields [ 17%] Built target plugin_forcefields Consolidate compiler generated dependencies of target plugin_fingerprints [ 17%] Built target plugin_fingerprints Consolidate compiler generated dependencies of target plugin_descriptors [ 19%] Built target plugin_descriptors Consolidate compiler generated dependencies of target plugin_ops [ 24%] Built target plugin_ops Consolidate compiler generated dependencies of target inchi [ 32%] Built target inchi Consolidate compiler generated dependencies of target cmlreactformat [ 33%] Built target cmlreactformat Consolidate compiler generated dependencies of target xmlformat [ 34%] Built target xmlformat Consolidate compiler generated dependencies of target png2format [ 35%] Built target png2format Consolidate compiler generated dependencies of target pubchem [ 35%] Built target pubchem Consolidate compiler generated dependencies of target rsmiformat [ 35%] Built target rsmiformat Consolidate compiler generated dependencies of target yasaraformat [ 35%] Built target yasaraformat Consolidate compiler generated dependencies of target xedformat [ 35%] Built target xedformat Consolidate compiler generated dependencies of target unichemformat [ 35%] Built target unichemformat Consolidate compiler generated dependencies of target stlformat [ 35%] Built target stlformat Consolidate compiler generated dependencies of target pqrformat [ 36%] Built target pqrformat Consolidate compiler generated dependencies of target posformat [ 36%] Built target posformat Consolidate compiler generated dependencies of target pcmodelformat [ 37%] Built target pcmodelformat Consolidate compiler generated dependencies of target cdxmlformat [ 38%] Built target cdxmlformat Consolidate compiler generated dependencies of target opendxformat [ 38%] Built target opendxformat Consolidate compiler generated dependencies of target mpdformat [ 38%] Built target mpdformat Consolidate compiler generated dependencies of target cmlformat [ 38%] Built target cmlformat Consolidate compiler generated dependencies of target moldenformat [ 38%] Built target moldenformat Consolidate compiler generated dependencies of target mmcifformat [ 39%] Built target mmcifformat Consolidate compiler generated dependencies of target lmpdatformat [ 39%] Built target lmpdatformat Consolidate compiler generated dependencies of target groformat [ 40%] Built target groformat Consolidate compiler generated dependencies of target gromos96format [ 40%] Built target gromos96format Consolidate compiler generated dependencies of target msmsformat [ 41%] Built target msmsformat Consolidate compiler generated dependencies of target ghemicalformat [ 41%] Built target ghemicalformat Consolidate compiler generated dependencies of target fpsformat [ 42%] Built target fpsformat Consolidate compiler generated dependencies of target fingerprintformat [ 42%] Built target fingerprintformat Consolidate compiler generated dependencies of target fhformat [ 42%] Built target fhformat Consolidate compiler generated dependencies of target pdbqtformat [ 42%] Built target pdbqtformat Consolidate compiler generated dependencies of target fastaformat [ 43%] Built target fastaformat Consolidate compiler generated dependencies of target fastsearchformat [ 43%] Built target fastsearchformat Consolidate compiler generated dependencies of target exyzformat [ 43%] Built target exyzformat Consolidate compiler generated dependencies of target viewmolformat [ 43%] Built target viewmolformat Consolidate compiler generated dependencies of target cssrformat [ 43%] Built target cssrformat Consolidate compiler generated dependencies of target cifformat [ 44%] Built target cifformat Consolidate compiler generated dependencies of target chemdrawct [ 45%] Built target chemdrawct Consolidate compiler generated dependencies of target aoforceformat [ 45%] Built target aoforceformat Consolidate compiler generated dependencies of target amberformat [ 46%] Built target amberformat Consolidate compiler generated dependencies of target acesformat [ 46%] Built target acesformat Consolidate compiler generated dependencies of target mdlformat [ 46%] Built target mdlformat Consolidate compiler generated dependencies of target chemtoolformat [ 46%] Built target chemtoolformat Consolidate compiler generated dependencies of target crystal09format [ 47%] Built target crystal09format Consolidate compiler generated dependencies of target turbomoleformat [ 48%] Built target turbomoleformat Consolidate compiler generated dependencies of target confabreport [ 48%] Built target confabreport Consolidate compiler generated dependencies of target chemdoodlejsonformat [ 49%] Built target chemdoodlejsonformat Consolidate compiler generated dependencies of target dmolformat [ 49%] Built target dmolformat Consolidate compiler generated dependencies of target cccformat [ 49%] Built target cccformat Consolidate compiler generated dependencies of target titleformat [ 49%] Built target titleformat Consolidate compiler generated dependencies of target jaguarformat [ 50%] Built target jaguarformat Consolidate compiler generated dependencies of target textformat [ 50%] Built target textformat Consolidate compiler generated dependencies of target fhiaimsformat [ 51%] Built target fhiaimsformat Consolidate compiler generated dependencies of target rxnformat [ 51%] Built target rxnformat Consolidate compiler generated dependencies of target gamessformat [ 51%] Built target gamessformat Consolidate compiler generated dependencies of target molproformat [ 51%] Built target molproformat Consolidate compiler generated dependencies of target svgformat [ 52%] Built target svgformat Consolidate compiler generated dependencies of target smilesformat [ 53%] Built target smilesformat Consolidate compiler generated dependencies of target chemkinformat [ 53%] Built target chemkinformat Consolidate compiler generated dependencies of target MNAformat [ 53%] Built target MNAformat Consolidate compiler generated dependencies of target pubchemjsonformat [ 54%] Built target pubchemjsonformat Consolidate compiler generated dependencies of target nulformat [ 54%] Built target nulformat Consolidate compiler generated dependencies of target mmodformat [ 54%] Built target mmodformat Consolidate compiler generated dependencies of target daltonformat [ 54%] Built target daltonformat Consolidate compiler generated dependencies of target asciiformat [ 55%] Built target asciiformat Consolidate compiler generated dependencies of target painterformat [ 55%] Built target painterformat Consolidate compiler generated dependencies of target adfformat [ 55%] Built target adfformat Consolidate compiler generated dependencies of target mol2format [ 56%] Built target mol2format Consolidate compiler generated dependencies of target gausscubeformat [ 56%] Built target gausscubeformat Consolidate compiler generated dependencies of target qchemformat [ 56%] Built target qchemformat Consolidate compiler generated dependencies of target xyzformat [ 57%] Built target xyzformat Consolidate compiler generated dependencies of target freefracformat [ 57%] Built target freefracformat Consolidate compiler generated dependencies of target pdbformat [ 57%] Built target pdbformat Consolidate compiler generated dependencies of target cacheformat [ 57%] Built target cacheformat Consolidate compiler generated dependencies of target castepformat [ 58%] Built target castepformat Consolidate compiler generated dependencies of target gaussformat [ 58%] Built target gaussformat Consolidate compiler generated dependencies of target featformat [ 58%] Built target featformat Consolidate compiler generated dependencies of target MCDLformat [ 59%] Built target MCDLformat Consolidate compiler generated dependencies of target tinkerformat [ 59%] Built target tinkerformat Consolidate compiler generated dependencies of target crkformat [ 59%] Built target crkformat Consolidate compiler generated dependencies of target molreport [ 60%] Built target molreport Consolidate compiler generated dependencies of target outformat [ 61%] Built target outformat Consolidate compiler generated dependencies of target acrformat [ 62%] Built target acrformat Consolidate compiler generated dependencies of target mpqcformat [ 63%] Built target mpqcformat Consolidate compiler generated dependencies of target fchkformat [ 64%] Built target fchkformat Consolidate compiler generated dependencies of target pngformat [ 64%] Built target pngformat Consolidate compiler generated dependencies of target povrayformat [ 64%] Built target povrayformat Consolidate compiler generated dependencies of target inchiformat [ 64%] Built target inchiformat Consolidate compiler generated dependencies of target gausszmatformat [ 65%] Built target gausszmatformat Consolidate compiler generated dependencies of target msiformat [ 65%] Built target msiformat Consolidate compiler generated dependencies of target gulpformat [ 65%] Built target gulpformat Consolidate compiler generated dependencies of target smileyformat [ 65%] Built target smileyformat Consolidate compiler generated dependencies of target hinformat [ 66%] Built target hinformat Consolidate compiler generated dependencies of target carformat [ 66%] Built target carformat Consolidate compiler generated dependencies of target gamessukformat [ 67%] Built target gamessukformat Consolidate compiler generated dependencies of target reportformat [ 67%] Built target reportformat Consolidate compiler generated dependencies of target mopacformat [ 67%] Built target mopacformat Consolidate compiler generated dependencies of target nwchemformat [ 67%] Built target nwchemformat Consolidate compiler generated dependencies of target pwscfformat [ 68%] Built target pwscfformat Consolidate compiler generated dependencies of target dlpolyformat [ 69%] Built target dlpolyformat Consolidate compiler generated dependencies of target siestaformat [ 69%] Built target siestaformat Consolidate compiler generated dependencies of target CSRformat [ 69%] Built target CSRformat Consolidate compiler generated dependencies of target boxformat [ 69%] Built target boxformat Consolidate compiler generated dependencies of target vaspformat [ 70%] Built target vaspformat Consolidate compiler generated dependencies of target shelxformat [ 71%] Built target shelxformat Consolidate compiler generated dependencies of target xsfformat [ 71%] Built target xsfformat Consolidate compiler generated dependencies of target abinitformat [ 72%] Built target abinitformat Consolidate compiler generated dependencies of target zindoformat [ 73%] Built target zindoformat Consolidate compiler generated dependencies of target orcaformat [ 73%] Built target orcaformat Consolidate compiler generated dependencies of target pointcloudformat [ 74%] Built target pointcloudformat Consolidate compiler generated dependencies of target APIInterface [ 74%] Built target APIInterface Consolidate compiler generated dependencies of target PQSformat [ 74%] Built target PQSformat Consolidate compiler generated dependencies of target mdffformat [ 74%] Built target mdffformat Consolidate compiler generated dependencies of target lpmdformat [ 75%] Built target lpmdformat Consolidate compiler generated dependencies of target chem3dformat [ 75%] Built target chem3dformat Consolidate compiler generated dependencies of target alchemyformat [ 75%] Built target alchemyformat Consolidate compiler generated dependencies of target chemdrawcdx [ 75%] Built target chemdrawcdx Consolidate compiler generated dependencies of target thermoformat [ 76%] Built target thermoformat Consolidate compiler generated dependencies of target balstformat [ 76%] Built target balstformat Consolidate compiler generated dependencies of target bgfformat [ 77%] Built target bgfformat Consolidate compiler generated dependencies of target copyformat [ 78%] Built target copyformat Consolidate compiler generated dependencies of target cacaoformat [ 79%] Built target cacaoformat Consolidate compiler generated dependencies of target obgrep [ 79%] Built target obgrep Consolidate compiler generated dependencies of target obspectrophore [ 79%] Built target obspectrophore Consolidate compiler generated dependencies of target obrms [ 80%] Built target obrms Consolidate compiler generated dependencies of target obdistgen [ 80%] Built target obdistgen Consolidate compiler generated dependencies of target obtautomer [ 81%] Built target obtautomer Consolidate compiler generated dependencies of target babel [ 81%] Built target babel Consolidate compiler generated dependencies of target obrotamer [ 81%] Built target obrotamer Consolidate compiler generated dependencies of target obabel [ 82%] Built target obabel Consolidate compiler generated dependencies of target obchiral [ 82%] Built target obchiral Consolidate compiler generated dependencies of target obthermo [ 82%] Built target obthermo Consolidate compiler generated dependencies of target obconformer [ 83%] Built target obconformer Consolidate compiler generated dependencies of target obenergy [ 83%] Built target obenergy Consolidate compiler generated dependencies of target obsym [ 83%] Built target obsym Consolidate compiler generated dependencies of target obfit [ 84%] Built target obfit Consolidate compiler generated dependencies of target obprobe [ 84%] Built target obprobe Consolidate compiler generated dependencies of target obgen [ 84%] Built target obgen Consolidate compiler generated dependencies of target obminimize [ 85%] Built target obminimize Consolidate compiler generated dependencies of target obprop [ 85%] Built target obprop Consolidate compiler generated dependencies of target obrotate [ 86%] Built target obrotate Consolidate compiler generated dependencies of target obgui [ 87%] Built target obgui Consolidate compiler generated dependencies of target roundtrip [ 88%] Built target roundtrip Consolidate compiler generated dependencies of target test_inchiwrite [ 88%] Built target test_inchiwrite Consolidate compiler generated dependencies of target test_runner [100%] Built target test_runner Install the project... -- Install configuration: "Release" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/include/openbabel-2.0/openbabel/babelconfig.h -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/pkgconfig/openbabel-2.0.pc -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/cmake/openbabel2/OpenBabel2_EXPORTS.cmake -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/cmake/openbabel2/OpenBabel2_EXPORTS-release.cmake -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/cmake/openbabel2/OpenBabel2Config.cmake -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/cmake/openbabel2/OpenBabel2ConfigVersion.cmake -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/include/inchi/inchi_api.h -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/include/openbabel-2.0/openbabel/chemdrawcdx.h -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/include/openbabel-2.0/openbabel/alias.h -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/include/openbabel-2.0/openbabel/atom.h -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/include/openbabel-2.0/openbabel/atomclass.h -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/include/openbabel-2.0/openbabel/base.h -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/include/openbabel-2.0/openbabel/bitvec.h -- Installing: 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/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/pdbqtformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/pdbqtformat.so" to "/usr/lib" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/pointcloudformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/pointcloudformat.so" to "/usr/lib" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/posformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/posformat.so" to "/usr/lib" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/pqrformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/pqrformat.so" to "/usr/lib" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/shelxformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/shelxformat.so" to "/usr/lib" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/smileyformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/smileyformat.so" to "/usr/lib" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/stlformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/stlformat.so" to "/usr/lib" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/thermoformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/thermoformat.so" to "/usr/lib" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/tinkerformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/tinkerformat.so" to "/usr/lib" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/unichemformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/unichemformat.so" to "/usr/lib" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/viewmolformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/viewmolformat.so" to "/usr/lib" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/xedformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/xedformat.so" to "/usr/lib" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/xyzformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/xyzformat.so" to "/usr/lib" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/yasaraformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/yasaraformat.so" to "/usr/lib" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/rxnformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/rxnformat.so" to "/usr/lib" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/chemdrawcdx.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/chemdrawcdx.so" to "/usr/lib" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/chemkinformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/chemkinformat.so" to "/usr/lib" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/rsmiformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/rsmiformat.so" to "/usr/lib" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/png2format.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/png2format.so" to "/usr/lib" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/cdxmlformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/cdxmlformat.so" to "/usr/lib" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/cmlformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/cmlformat.so" to "/usr/lib" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/pubchem.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/pubchem.so" to "/usr/lib" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/xmlformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/xmlformat.so" to "/usr/lib" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/cmlreactformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib/openbabel/2.4.1/cmlreactformat.so" to "/usr/lib" -- Installing: 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/usr/src/slapt-src/libraries/openbabel/openbabel-2.4.1-i586-1salix15.0.txz created. Installing package openbabel-2.4.1-i586-1salix15.0... | openbabel (Open Babel 3D Library) | | Open Babel is a project designed to pick up where Babel left off, | as a cross-platform program and library designed to interconvert | between many file formats used in molecular modeling, computational | chemistry, and many related areas. | | Homepage: http://openbabel.sourceforge.net/wiki/Main_Page | | | | |